Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001148A_C01 KCC001148A_c01
(689 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_058897.1| hypothetical protein XP_058897 [Homo sapiens] 57 3e-07
gb|EAA41959.1| GLP_82_16662_17066 [Giardia lamblia ATCC 50803] 56 6e-07
ref|XP_126856.1| RIKEN cDNA 4930504H06 [Mus musculus] gi|1285412... 53 4e-06
ref|XP_343050.1| hypothetical protein XP_343049 [Rattus norvegicus] 52 7e-06
gb|AAA96159.2| Collagen protein 33 [Caenorhabditis elegans] 42 0.009
>ref|XP_058897.1| hypothetical protein XP_058897 [Homo sapiens]
Length = 131
Score = 57.0 bits (136), Expect = 3e-07
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Frame = +2
Query: 128 YLESNKIPQLFEAITSDLLFYKPENPKEHIVKYLENVKVAGTAPL-----INEQDLETMF 292
YLE ++I ++ +TS LLF++PE PKE+++ LE +++A + ++ ++ MF
Sbjct: 13 YLEKHQIKEVVSYLTSALLFFRPEKPKEYLISLLERLRIAKVTGVAFPFFMDNSNIVAMF 72
Query: 293 GMFDITKRGTVTAEQANRALQVILGPAADLAEVGVKPGSNLTKDQFVSSMAHALK 457
M D + RGT++ Q AL+ LG + ++ G +T D+F + +K
Sbjct: 73 EMMDSSGRGTISFVQYKEALKT-LGLCTEDEDL-QDDGHKITLDKFKEEVNKRMK 125
>gb|EAA41959.1| GLP_82_16662_17066 [Giardia lamblia ATCC 50803]
Length = 134
Score = 55.8 bits (133), Expect = 6e-07
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 98 MEDPRAKVEHYLESNKIPQLFEAITSDLLFYKPENPKEH---IVKYLENVKVAGTAPLIN 268
M +PR E YL+ IP LF+ + S ++ PE+P H I + L++ P
Sbjct: 1 MGNPRIAAEQYLKKYNIPDLFDYLLSQIVINLPEDPWTHLSEICEKLDSRSFQDNIPFFT 60
Query: 269 EQDLETMFGMFDITKRGTVTAEQANRALQVILGPAADLAEVGVKPGSNLTKDQF 430
++ +F +++ RG +T QA +AL+ + + ++ + +NL++++F
Sbjct: 61 RDEINIVFSNYEVLNRGYITGAQAKQALKTMGLKPRIVDDLFIDDDANLSREEF 114
>ref|XP_126856.1| RIKEN cDNA 4930504H06 [Mus musculus] gi|12854129|dbj|BAB29935.1|
unnamed protein product [Mus musculus]
Length = 132
Score = 53.1 bits (126), Expect = 4e-06
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Frame = +2
Query: 104 DPRAKVEHYLESNKIPQLFEAITSDLLFYKPENPKEHIVKYLENVKVAGTAPL-----IN 268
D + + YLE ++I +L +TS LLF +P+ P+E+++ LE ++VA + ++
Sbjct: 6 DRELQAKLYLERHRIMELLNQLTSFLLFARPKKPREYLISLLERLRVAKATHVAFPYFMD 65
Query: 269 EQDLETMFGMFDITKRGTVTAEQANRALQVILGPAADLAEVGVKPGSNLTKDQFVSSMAH 448
+ +MF M D+ RG ++ Q AL+ + AD EV G +T D F M
Sbjct: 66 NSNTVSMFEMMDMAGRGCISFVQYKEALKNLGLCTAD--EVLNDDGHIITLDTFRDEMNK 123
Query: 449 ALKR 460
+++
Sbjct: 124 RMEK 127
>ref|XP_343050.1| hypothetical protein XP_343049 [Rattus norvegicus]
Length = 132
Score = 52.4 bits (124), Expect = 7e-06
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Frame = +2
Query: 104 DPRAKVEHYLESNKIPQLFEAITSDLLFYKPENPKEHIVKYLENVKVA---GTA--PLIN 268
D + + YLE ++I +L +TS LLF +P+ P+++++ LE +KVA G A ++
Sbjct: 6 DRELQAKLYLEKHRIMELLSQLTSFLLFARPKKPRDYLISLLERLKVAKLTGVAFPYFMD 65
Query: 269 EQDLETMFGMFDITKRGTVTAEQANRALQVILGPAADLAEVGVKPGSNLTKDQFVSSMAH 448
++ +MF M D +GT++ Q AL+ + D EV G +T D+F +
Sbjct: 66 NSNIVSMFEMMDNAGKGTISFVQYKEALKNLGLYTED--EVLGDDGHAITLDKFRDEVNK 123
Query: 449 ALK 457
+K
Sbjct: 124 RMK 126
>gb|AAA96159.2| Collagen protein 33 [Caenorhabditis elegans]
Length = 304
Score = 42.0 bits (97), Expect = 0.009
Identities = 33/100 (33%), Positives = 40/100 (40%), Gaps = 11/100 (11%)
Frame = +1
Query: 319 HGHGRAGKPCASSHLGASSGPCGG----GRQARE-------QPHKGPVRELNGART*TCQ 465
HG G G C + L +GP G GR + P K PV+ C+
Sbjct: 92 HGGGGGGGNCEACCLPGPAGPAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPPPCK 151
Query: 466 PIPATVVTAPVPPG**APGGASPNQSGSRAAPGWRRGPGQ 585
P P P PPG APG A N G+ APG PG+
Sbjct: 152 PCPDGPAGPPGPPG--APGDAGTN--GAPGAPGGDAPPGE 187
