Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001143A_C01 KCC001143A_c01
(597 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_862423.1| proline-rich extensin-like protein [Micrococcus... 53 3e-06
pir||EDBEIF immediate-early protein IE180 - suid herpesvirus 1 (... 51 1e-05
pir||D34768 ORF4 protein - Orf virus (strain NZ2) gi|332566|gb|A... 51 1e-05
ref|NP_771502.1| bll4862 [Bradyrhizobium japonicum] gi|27353126|... 50 2e-05
ref|ZP_00141220.1| COG0642: Signal transduction histidine kinase... 50 3e-05
>ref|NP_862423.1| proline-rich extensin-like protein [Micrococcus sp. 28]
gi|18025411|gb|AAK62519.1| proline-rich extensin-like
protein [Micrococcus sp. 28]
Length = 406
Score = 53.1 bits (126), Expect = 3e-06
Identities = 35/80 (43%), Positives = 40/80 (49%), Gaps = 1/80 (1%)
Frame = +1
Query: 181 PAVPLVRKR-PRAVPSSSRPPPGPLRCTRPSSSHPPPPRPLPAPAVSC*QPWH*PPRPRR 357
PAVPL A P +RPPPGP P+++ PPPP PA A P PP P R
Sbjct: 276 PAVPLAPPAVSAAAPPPARPPPGPAAPPPPAAALPPPPAAPPARAAPAAAPAPAPPVPAR 335
Query: 358 WACCGRPRRVPRARRPLTPA 417
A P +PRA P TPA
Sbjct: 336 MAA---PAAMPRA-APATPA 351
Score = 35.4 bits (80), Expect = 0.61
Identities = 42/136 (30%), Positives = 50/136 (35%), Gaps = 27/136 (19%)
Frame = +3
Query: 147 TSSSARMTAQPARGAFGTQAPARCALVVA-------ASAR-------PSPVHAPEQQPST 284
T ++AR A PAR AP L A AS R P+PV A E P+
Sbjct: 153 TPAAARPAAVPARAPLIGDAPPAAGLTPAPESSPSLASTRSTVPSTPPAPVPAAEVPPAA 212
Query: 285 ASQTSASSRRELLTAVALTAAAAPVGLLRPA-------------PAGAKGAAPVDPGDWS 425
S +S + A A AAP+ L PA P A G+ P
Sbjct: 213 PVPWSENSAED---APLPAAPAAPLSALLPAAPAAPLSAPPLAEPPAAPGSLPAPFAPAV 269
Query: 426 SPGLGAPVDPNAPKFV 473
SP AP P AP V
Sbjct: 270 SPEAVAPAVPLAPPAV 285
>pir||EDBEIF immediate-early protein IE180 - suid herpesvirus 1 (strain
Indiana-Funkhauser)
Length = 1460
Score = 51.2 bits (121), Expect = 1e-05
Identities = 46/118 (38%), Positives = 53/118 (43%), Gaps = 1/118 (0%)
Frame = -1
Query: 531 ASGGPEPM*APGSAR-PRAASQTWGRWGPRAHPVQGCSSRRGQRAPRPWHPPGPAAAGPP 355
+S GP P APG R PR SQ R GP A P +R + PRP PP P A P
Sbjct: 134 SSSGPGPGPAPGPGRRPRQHSQRQ-RPGPPAAP----GARPPPQPPRPPPPPAPPAPPAP 188
Query: 354 ARPRRSVPRLSAAHGGSWQRSGRRWMAAARARAPERAGRRPRRRGHSARALAYQRHRG 181
PRR PR G R G R ++ R R G PRR HS + +RH G
Sbjct: 189 PAPRR--PR-----GDGPPRGGTRSVSPGR-----RRGLGPRRHQHSQQRWPQRRHGG 234
Score = 35.0 bits (79), Expect = 0.80
Identities = 27/69 (39%), Positives = 29/69 (41%)
Frame = +1
Query: 199 RKRPRAVPSSSRPPPGPLRCTRPSSSHPPPPRPLPAPAVSC*QPWH*PPRPRRWACCGRP 378
R P A P + RPPP P R PPPP PAP PP PRR G P
Sbjct: 158 RPGPPAAPGA-RPPPQPPR--------PPPPPAPPAPPA--------PPAPRRPRGDGPP 200
Query: 379 RRVPRARRP 405
R R+ P
Sbjct: 201 RGGTRSVSP 209
Score = 33.1 bits (74), Expect = 3.0
Identities = 49/163 (30%), Positives = 54/163 (33%), Gaps = 29/163 (17%)
Frame = -1
Query: 570 PCPPNNIDRPHPAASGGPEPM*APGSARPRAASQTWGR---WGPRAHP--VQGCSSRRGQ 406
P PP P P A P G R S + GR GPR H Q RR
Sbjct: 174 PRPPPPPAPPAPPAPPAPRRPRGDGPPRGGTRSVSPGRRRGLGPRRHQHSQQRWPQRRHG 233
Query: 405 RAPRPWHPPGP-------AAAGPPARPRRSVPRLSAAHGGSWQRSGRRWMAAARARAPE- 250
P P PP P AAA PPA V S A + + R + A A PE
Sbjct: 234 GGPLPQPPPPPGRSRRPAAAAPPPAEGTAVVTITSTASPWLDEPAAARRLDPAAAWRPEP 293
Query: 249 ----------------RAGRRPRRRGHSARALAYQRHRGPAAQ 169
R RRPR R R +R RG Q
Sbjct: 294 RLLQPQLQLQLHHHRRRRARRPRPREGRGRTRP-RRGRGAPLQ 335
>pir||D34768 ORF4 protein - Orf virus (strain NZ2) gi|332566|gb|AAA46790.1| ORF4
Length = 264
Score = 51.2 bits (121), Expect = 1e-05
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 24/137 (17%)
Frame = -1
Query: 504 APGSARPRAASQTWGRWGPRAHPVQGCSSRRGQRAPRPWHPPGPAAAGPPARPRRSVPRL 325
+P + R ++ + R GP + G G+++P P P +A P+ R L
Sbjct: 46 SPPTVRQVTEAEPFARTGPASTRAAGSGGAAGRKSP-PRRKPSATSASAPSSLRGEGCML 104
Query: 324 SAAHGGSWQRSGRRWMAAARA------------------------RAPERAGRRPRRRGH 217
G W+ G ++AA A RAP RAGR P R
Sbjct: 105 VGCGVGVWRVEGGCGVSAAAAGGSRLLGGPFSLCSVAPGPGQGLRRAPGRAGRYPAARPA 164
Query: 216 SARALAYQRHRGPAAQS 166
+A A A +RHRGPAA+S
Sbjct: 165 AASAAASRRHRGPAARS 181
Score = 38.9 bits (89), Expect = 0.055
Identities = 39/117 (33%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = -1
Query: 501 PGSARPRAASQTWGRWGPRAHPVQG-CSSRRGQRAPRPWHPPGPAAAGPP-ARPRRSVPR 328
PG RA + GR+ P A P ++ R R P P PP AR + PR
Sbjct: 144 PGQGLRRAPGRA-GRY-PAARPAAASAAASRRHRGPAARSSPAAERPAPPRARAEAAAPR 201
Query: 327 LSAAHGGSWQRSGRRWMAAARARAPERAGRRPRRRGHSARALAYQRHRGPAAQSCVR 157
A+ GS SG +AAR+ A +G RP G +ARA A R A + R
Sbjct: 202 -RASSSGSRASSGPPRRSAARSSA--ASGSRPAASGPAARAPAASSARTSAGEGAAR 255
Score = 35.8 bits (81), Expect = 0.47
Identities = 37/109 (33%), Positives = 43/109 (38%), Gaps = 12/109 (11%)
Frame = -1
Query: 495 SARPRAASQTWGRWGPRAHPVQGCSSRRGQRAPRPWHPPGPAAAGPPAR----------- 349
+ARP AAS R H +G ++R A RP P A A P R
Sbjct: 160 AARPAAASAA----ASRRH--RGPAARSSPAAERPAPPRARAEAAAPRRASSSGSRASSG 213
Query: 348 -PRRSVPRLSAAHGGSWQRSGRRWMAAARARAPERAGRRPRRRGHSARA 205
PRRS R SAA G SG A A + A AG R + RA
Sbjct: 214 PPRRSAARSSAASGSRPAASGPAARAPAASSARTSAGEGAARGPGAPRA 262
Score = 33.9 bits (76), Expect = 1.8
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 13/128 (10%)
Frame = +3
Query: 123 PFTMPSLTTSSSARMTAQPAR-GAFGTQAPARCALVVA------------ASARPSPVHA 263
PF++ S+ + P R G + PA + + A+ RP+P A
Sbjct: 134 PFSLCSVAPGPGQGLRRAPGRAGRYPAARPAAASAAASRRHRGPAARSSPAAERPAPPRA 193
Query: 264 PEQQPSTASQTSASSRRELLTAVALTAAAAPVGLLRPAPAGAKGAAPVDPGDWSSPGLGA 443
+ + +S+ SR A ++ RPA +G AP +S G GA
Sbjct: 194 RAEAAAPRRASSSGSRASSGPPRRSAARSSAASGSRPAASGPAARAPAASSARTSAGEGA 253
Query: 444 PVDPNAPK 467
P AP+
Sbjct: 254 ARGPGAPR 261
>ref|NP_771502.1| bll4862 [Bradyrhizobium japonicum] gi|27353126|dbj|BAC50127.1|
bll4862 [Bradyrhizobium japonicum USDA 110]
Length = 887
Score = 50.4 bits (119), Expect = 2e-05
Identities = 38/105 (36%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +1
Query: 175 SRPAVPLVRKRPRAVPSSSRPPPGPLRCTRPSSSHPPPPRPLPAPAVSC*QPWH*PP--R 348
++PA P RP+AV + PPP + P + PPPPRP P AV+ P PP R
Sbjct: 783 AKPAAP--PPRPQAVARPTPPPPPRVSAPPPRMAAPPPPRPAPPVAVARPAP---PPMAR 837
Query: 349 PRRWACCGRPRRVPRARRPLTPATGAALDWVRPWTPTPPSL*SCP 483
P RP P R + P A RP P PP+ CP
Sbjct: 838 PAPPPPVARPAPPPPPRVAVAPPPRPAAPPPRPAAP-PPAAKKCP 881
Score = 40.0 bits (92), Expect = 0.025
Identities = 34/95 (35%), Positives = 40/95 (41%), Gaps = 3/95 (3%)
Frame = +1
Query: 208 PRAVPSSSRP---PPGPLRCTRPSSSHPPPPRPLPAPAVSC*QPWH*PPRPRRWACCGRP 378
P A P +++P PP P RP+ PPPP + AP P PPRP RP
Sbjct: 776 PPAPPQAAKPAAPPPRPQAVARPT---PPPPPRVSAPPPRMAAP--PPPRPAPPVAVARP 830
Query: 379 RRVPRARRPLTPATGAALDWVRPWTPTPPSL*SCP 483
P A RP P A RP P PP + P
Sbjct: 831 APPPMA-RPAPPPPVA-----RPAPPPPPRVAVAP 859
Score = 35.0 bits (79), Expect = 0.80
Identities = 29/85 (34%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = -1
Query: 570 PCPPNNIDRPHPAASGGPEPM*APGSARPRAASQTWGRWGPRAHPVQGCSSRRGQRAPRP 391
P PP + P P + P P AP A R A R P PV RP
Sbjct: 800 PPPPPRVSAPPPRMAAPPPPRPAPPVAVARPAPPPMARPAP-PPPV-----------ARP 847
Query: 390 WHPPGP-AAAGPPARPRRSVPRLSA 319
PP P A PP RP PR +A
Sbjct: 848 APPPPPRVAVAPPPRPAAPPPRPAA 872
Score = 32.0 bits (71), Expect = 6.8
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -3
Query: 448 TGAPSPGLLQSPGSTGAAPLAPAGAGRSRPTGAAAAVSATA 326
T P+ L PGS G P PAGA + P G +ATA
Sbjct: 632 TRLPAANTLPVPGSHGGPPAPPAGAAGTLPGGKPLPSTATA 672
Score = 31.6 bits (70), Expect = 8.8
Identities = 29/81 (35%), Positives = 33/81 (39%)
Frame = +1
Query: 172 RSRPAVPLVRKRPRAVPSSSRPPPGPLRCTRPSSSHPPPPRPLPAPAVSC*QPWH*PPRP 351
R P V + R P P +RP P P RP+ PPPPR AP PPRP
Sbjct: 820 RPAPPVAVARPAP---PPMARPAPPP-PVARPAP--PPPPRVAVAP----------PPRP 863
Query: 352 RRWACCGRPRRVPRARRPLTP 414
A RP P A + P
Sbjct: 864 A--APPPRPAAPPPAAKKCPP 882
>ref|ZP_00141220.1| COG0642: Signal transduction histidine kinase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 733
Score = 49.7 bits (117), Expect = 3e-05
Identities = 49/156 (31%), Positives = 57/156 (36%), Gaps = 25/156 (16%)
Frame = -1
Query: 549 DRPHPAASGGPEPM*APGSARPRAASQTWGRWGP---RAHPVQGCSSR-----------R 412
DR HP A G PEP+ S + T GR P R HP + R R
Sbjct: 3 DRRHPPAGGRPEPVGIVESLKRGCHENTAGRGRPAARRRHPRRAAPGRRYRGMGDRRRGR 62
Query: 411 GQRA-----------PRPWHPPGPAAAGPPARPRRSVPRLSAAHGGSWQRSGRRWMAAAR 265
G+RA RP P P PA P + P +A G R GRR R
Sbjct: 63 GERAGHRRVRPAGARHRPAAPQRPGHPAQPASPGPAHPGAAAHRAGQGGRPGRRARQRCR 122
Query: 264 ARAPERAGRRPRRRGHSARALAYQRHRGPAAQSCVR 157
R P++A R R G AR PAA R
Sbjct: 123 -RLPDQALRSRRTAGTGARPDPPHHRSRPAATGARR 157
