Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001130A_C01 KCC001130A_c01
(624 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA84809.1| ESTs AU078277(S1084),AU078273(S13585), D47857(S1... 64 2e-09
gb|AAM63843.1| unknown [Arabidopsis thaliana] 55 8e-07
ref|NP_199024.1| expressed protein [Arabidopsis thaliana] gi|975... 55 1e-06
ref|NP_197353.1| expressed protein [Arabidopsis thaliana] 43 0.003
ref|NP_187568.1| expressed protein [Arabidopsis thaliana] gi|741... 43 0.004
>dbj|BAA84809.1| ESTs AU078277(S1084),AU078273(S13585), D47857(S13585) correspond to
a region of the predicted gene.~Similar to
Caenorhabditis elegans cosmid C15H9; hypothetical
protein (U56965) [Oryza sativa (japonica
cultivar-group)] gi|11875158|dbj|BAB19371.1| contains
ESTs
AU078277(S1084),AU078273(S13585),D47857(S13585)~unknown
protein [Oryza sativa (japonica cultivar-group)]
gi|28190667|gb|AAO33145.1| unknown [Oryza sativa
(japonica cultivar-group)]
Length = 454
Score = 63.9 bits (154), Expect = 2e-09
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Frame = +3
Query: 60 ARSLGLLLLLVLALGAHAKIHHSVVDKDDRPLIPLTEAFGFAEGGKLDITIRDIGLYRLH 239
A +L LLLLL+LA A A+I +V+ D R +IPL E FGF+ G L++ + I
Sbjct: 10 AAALALLLLLLLAAPAAAEIRETVIRSDPRSIIPLDE-FGFSHSGVLELNVSGIAFDPPA 68
Query: 240 GSQEDVSNWENFGFFLSPVEADAALEQDLTD-SSKCILND--VNNLFTF----KDSSVQN 398
S+ D+S GFFLS ++A + + L D C L V ++F S+
Sbjct: 69 SSELDLS---QLGFFLSTLDAWVHVLRQLQDLDVTCALQADLVKLAYSFDRLRPPSNPAG 125
Query: 399 VILGKLESFTFHFVVQNGGLFYLYFANC 482
V + + SF+ F V G + L FANC
Sbjct: 126 VEVARSSSFSTAFPVSEPGQYTLVFANC 153
>gb|AAM63843.1| unknown [Arabidopsis thaliana]
Length = 439
Score = 55.1 bits (131), Expect = 8e-07
Identities = 47/139 (33%), Positives = 66/139 (46%), Gaps = 3/139 (2%)
Frame = +3
Query: 75 LLLLLVLALGAHAKIHHSVVDKDDRPLIPLTEAFGFAEGGKLDITIRDIGLYRLHGSQED 254
L+LLL+ A A+I S + DDRP+IPL E FGF G+L++ D L S D
Sbjct: 11 LILLLISISIASAEIRKSEIRSDDRPIIPLDE-FGFTHSGRLEL---DASKIWLSNSNPD 66
Query: 255 VSNWENFGFFLSPVEADAALEQDLTDSS-KCILND--VNNLFTFKDSSVQNVILGKLESF 425
+ + GFFL +A + Q L + C L V ++FTF N+ G F
Sbjct: 67 L-DLSKVGFFLCTRDAWVHVIQQLEEEEITCALQSDLVKHVFTF-----NNLKGGDKSKF 120
Query: 426 TFHFVVQNGGLFYLYFANC 482
+ F + + L FANC
Sbjct: 121 STVFTENDADQYSLVFANC 139
>ref|NP_199024.1| expressed protein [Arabidopsis thaliana] gi|9757954|dbj|BAB08442.1|
dbj|BAA84809.1~gene_id:MJC20.20~similar to unknown
protein [Arabidopsis thaliana]
gi|16648953|gb|AAL24328.1| Unknown protein [Arabidopsis
thaliana] gi|20259830|gb|AAM13262.1| unknown protein
[Arabidopsis thaliana]
Length = 439
Score = 54.7 bits (130), Expect = 1e-06
Identities = 47/139 (33%), Positives = 66/139 (46%), Gaps = 3/139 (2%)
Frame = +3
Query: 75 LLLLLVLALGAHAKIHHSVVDKDDRPLIPLTEAFGFAEGGKLDITIRDIGLYRLHGSQED 254
L+LLL+ A A+I S + DDRP+IPL E FGF G+L++ D L S D
Sbjct: 11 LILLLISISIASAEIRKSEIRSDDRPIIPLDE-FGFTHSGRLEL---DASKIWLSNSNPD 66
Query: 255 VSNWENFGFFLSPVEADAALEQDLTDSS-KCILND--VNNLFTFKDSSVQNVILGKLESF 425
+ + GFFL +A + Q L + C L V ++FTF N+ G F
Sbjct: 67 L-DLSKVGFFLCTRDAWVHVIQQLEEEEITCALQSDLVKHVFTF-----NNLKGGDKSRF 120
Query: 426 TFHFVVQNGGLFYLYFANC 482
+ F + + L FANC
Sbjct: 121 STVFTENDADQYSLVFANC 139
>ref|NP_197353.1| expressed protein [Arabidopsis thaliana]
Length = 440
Score = 43.1 bits (100), Expect = 0.003
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Frame = +3
Query: 51 SQMARSLGLLLLLVLALGA--HAKIHHSVVDKDDRPLIPLTEAFGFAEGGKLDITIRDIG 224
++M S+ + LL A A A+I V+ D RP+I L E FGF G + ++I +
Sbjct: 2 AKMPLSVVVFLLFSAAFLAVSMAEIKSLVISDDARPMI-LFEKFGFTHTGHVTVSISSVS 60
Query: 225 LYRLHGSQEDVSNWENFGFFLSPVEADAALEQDLTDSSK-CILND--VNNLFTFKDSSVQ 395
+ + S + GFFL E+ + ++ + + C+L+ V +LFTF+D S
Sbjct: 61 V--VSTSSDPNPEASRLGFFLLSEESLLQVLLEIQQNPRFCVLDSHYVTHLFTFRDLSPP 118
Query: 396 NVILGKLESFTFHFVVQNGGLFYLYFANC 482
F + V + + L+FANC
Sbjct: 119 -----PNSRFNQSYPVTSPNEYSLFFANC 142
>ref|NP_187568.1| expressed protein [Arabidopsis thaliana] gi|7417736|gb|AAF62563.1|
unknown protein [Arabidopsis thaliana]
gi|27311853|gb|AAO00892.1| unknown protein [Arabidopsis
thaliana] gi|30387529|gb|AAP31930.1| At3g09570
[Arabidopsis thaliana]
Length = 439
Score = 42.7 bits (99), Expect = 0.004
Identities = 34/127 (26%), Positives = 59/127 (45%), Gaps = 3/127 (2%)
Frame = +3
Query: 111 AKIHHSVVDKDDRPLIPLTEAFGFAEGGKLDITIRDIGLYRLHGSQEDVSNWENFGFFLS 290
A+I + D RP+I L E FGF + G + ++I + + + S + + + GFFL
Sbjct: 23 AEIKSLTISDDSRPMI-LFEKFGFTQSGHVSVSISSVAV--VSSSSDPIPDPSRLGFFLM 79
Query: 291 PVEADAALEQDLTDSSK-CIL--NDVNNLFTFKDSSVQNVILGKLESFTFHFVVQNGGLF 461
E+ + ++ + C+L N V +LFTF D S + + V + +
Sbjct: 80 SEESLLQVVLEIEQNPNFCVLDSNYVLHLFTFHDLSPP-----PGSKYEHLYPVMSPNEY 134
Query: 462 YLYFANC 482
L+F NC
Sbjct: 135 SLFFVNC 141
