Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001129A_C01 KCC001129A_c01
(800 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio] 58 2e-07
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 54 2e-06
gb|AAQ56190.1| DNA polymerase beta-PAK [Trypanosoma brucei] 54 4e-06
ref|XP_293372.2| similar to Ser/Arg-related nuclear matrix prote... 51 2e-05
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 51 2e-05
>gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio]
Length = 896
Score = 57.8 bits (138), Expect = 2e-07
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Frame = -2
Query: 472 RSVPLPPCRSALAQSQ-----------QERQPGPPPLRAALTGGRRATPAQPSPL----- 341
R P PP R +QS + R P PPP R RR +P PSP
Sbjct: 499 RRSPSPPGRRHRSQSPVRRRRSPSPPPRRRSPSPPPRRFTPPIQRRYSPPSPSPAQKRRS 558
Query: 340 -SNPPPRI*APTISRRTQLP------RRVGCC--KHRRISMLPLQLSAPASEIARLNAAV 188
+PP R +P+ + ++P RR+ RR S P+ + +++ +
Sbjct: 559 SGSPPKRRRSPSPMPKRRIPPSPPPKRRMSPSPPPKRRKSPSPMSKRRTSPSVSKRRTSP 618
Query: 187 QPGARH----S*LSRRR--AGPPARRRGCPAAAPRRSGRPAPRACGTARPSP----RPSR 38
P A+H S +S+RR A P ++RR P+ AP+R P+P PSP SR
Sbjct: 619 SPVAKHRRSPSPMSKRRTCASPVSKRRNSPSPAPQRRSSPSPMPKHRGSPSPVTKRHTSR 678
Query: 37 TPAGGR 20
+P R
Sbjct: 679 SPKRSR 684
Score = 39.3 bits (90), Expect = 0.075
Identities = 61/263 (23%), Positives = 91/263 (34%), Gaps = 14/263 (5%)
Frame = -2
Query: 766 RLNGHAPHATSIIYRKSKAKARPCRSALPAPASKRQRIQ----------PAKLVTLRTAH 617
R H+P + R+ A P + P+P +R R Q P +
Sbjct: 478 RRRSHSPASP----RRRHRDASPRKRRSPSPPGRRHRSQSPVRRRRSPSPPPRRRSPSPP 533
Query: 616 TTESTLSLSQSVNLQKPRCFLKRSSSGTTPLCAASITSRPV--LPPPYVP--RSVPLPPC 449
T + + + P KR SSG+ P S + P +PP P R
Sbjct: 534 PRRFTPPIQRRYSPPSPSPAQKRRSSGSPPKRRRSPSPMPKRRIPPSPPPKRR------- 586
Query: 448 RSALAQSQQERQPGPPPLRAALTGGRRATPAQPSPLSNPPPRI*APTISRRTQLPRRVGC 269
P PPP R PSP+S R +P++S+R P V
Sbjct: 587 ----------MSPSPPPKRR----------KSPSPMSK---RRTSPSVSKRRTSPSPV-- 621
Query: 268 CKHRRISMLPLQLSAPASEIARLNAAVQPGARHS*LSRRRAGPPARRRGCPAAAPRRSGR 89
KHRR S +++ P ++ R P +RR P+ P+ G
Sbjct: 622 AKHRR----------SPSPMSKRRTCASPVSKR----RNSPSPAPQRRSSPSPMPKHRGS 667
Query: 88 PAPRACGTARPSPRPSRTPAGGR 20
P+P SP+ SR + G+
Sbjct: 668 PSPVTKRHTSRSPKRSRGTSPGK 690
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 54.3 bits (129), Expect = 2e-06
Identities = 70/263 (26%), Positives = 97/263 (36%), Gaps = 35/263 (13%)
Frame = -2
Query: 715 KAKARPCRSALPAPASKRQRIQPAKLVTLRTAHTTESTLSLSQSVNLQKPRCFLKRSSSG 536
+ + P RSA P+P +++ P + R T S + + P +RS S
Sbjct: 518 RRRLSPSRSASPSPRKRQKETSPRMQMGKRWQSPV--TKSSRRRRSPSPPPARRRRSPSP 575
Query: 535 TTPLCAASITSRPVLPPPYVPRSVPLPPCRSALAQSQQERQPGPPPLRAALTGGRRATPA 356
P P PPP R P PP R R P PPP R + + R + P
Sbjct: 576 APP--------PPPPPPPPRRRRSPTPPPR--------RRTPSPPPRRRSPSPRRYSPPI 619
Query: 355 Q----PSP---------------------------LSNPPPRI*APTISRRTQLPRRVGC 269
Q PSP +PPP+ +PT+++R
Sbjct: 620 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRSPSL---S 676
Query: 268 CKHRRISMLPLQLSAPASEIARLNAAVQPGARHS*LSRRRA----GPPARRRGCPAAAPR 101
KHR+ + R + QP RHS R RA PP RRG +A+P+
Sbjct: 677 SKHRK--------GSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGA-SASPQ 727
Query: 100 RSGRPAPRACGTARPSPRPSRTP 32
P+P + RP R SRTP
Sbjct: 728 GRQSPSP----STRPIRRVSRTP 746
Score = 34.7 bits (78), Expect = 1.8
Identities = 67/286 (23%), Positives = 101/286 (34%), Gaps = 33/286 (11%)
Frame = -2
Query: 790 EEDRPMDERLNGHAPHATSIIYRKSKAKARPCRSALPAPASKRQRIQPAKLVTLRTAHTT 611
++D D+R + R + R RS P S R + + + H T
Sbjct: 146 KQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRT 205
Query: 610 ESTL------SLSQSVNLQKPRCFLKRSSSGTTPLCAASITSRPVLPPPYVPRSVPLPPC 449
+S +S L +P +K SS + A+ TS + P P VP P
Sbjct: 206 KSRSPSPAPEKKEKSPELPEPSVRMKDSS-----VQEATSTSDILKAPK--PEPVPEPKE 258
Query: 448 RSALAQSQQERQPGPPPLRAALTGGRRATPAQPS----------------PLSNPPPRI* 317
S S++E++ P R+ R PS P P PR
Sbjct: 259 PSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRR- 317
Query: 316 APTISRRTQLPRRVGCCKHRRISMLPLQLSAPASEIARLNAAVQPGARHS*LSRRRAGP- 140
P+ RRT R +HRR +P R +A++ + S SR R+ P
Sbjct: 318 RPSPRRRTPPRRMPPPPRHRRSR-------SPGRRRRRSSASLSGSSSSSSSSRSRSPPK 370
Query: 139 -PARRRGCPAAAPRRSGRPAP---------RACGTARPSPRPSRTP 32
P +R P PR++ R +P R A P P+ +P
Sbjct: 371 KPPKRTSSP---PRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSP 413
Score = 33.5 bits (75), Expect = 4.1
Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 11/170 (6%)
Frame = -2
Query: 799 TPPEEDR----PMDERLNGHAPHATSIIYRKSKAKARPCRSALPAPASKRQRIQPAKLVT 632
TPP R P R ++ I R S + R+A P P KR R P+
Sbjct: 593 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKR-RASPSPPPK 651
Query: 631 LRTAHTTESTLSLSQSVNLQKPRCFLKRSSSGTTPLCAASITSRPV-------LPPPYVP 473
R +H+ S +V ++ + G++P + P P P P
Sbjct: 652 RRVSHSPPPK-QRSPTVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAP 710
Query: 472 RSVPLPPCRSALAQSQQERQPGPPPLRAALTGGRRATPAQPSPLSNPPPR 323
++ PP R + S Q RQ P R R P + ++P P+
Sbjct: 711 QTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQ 760
Score = 32.3 bits (72), Expect = 9.1
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = -3
Query: 531 RRCVLLPSRAAPFSRRHMFLAVCPCRPAAARWRSRSKKGSLARRRFAPPSPAAGVQRQPS 352
RR L PSR+A S R P RW+S K S RRR +P P A +R PS
Sbjct: 517 RRRRLSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSS--RRRRSPSPPPARRRRSPS 574
Score = 32.3 bits (72), Expect = 9.1
Identities = 23/58 (39%), Positives = 27/58 (45%), Gaps = 7/58 (12%)
Frame = +2
Query: 23 TPSWCTRRPRRWPSSSASAWSRPPRAPRSRS-------RTPSAPRRRASPSSTKLAMP 175
+PS R RR PS + PP R RS RTPS P RR SPS + + P
Sbjct: 561 SPSPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPP 618
>gb|AAQ56190.1| DNA polymerase beta-PAK [Trypanosoma brucei]
Length = 813
Score = 53.5 bits (127), Expect = 4e-06
Identities = 52/182 (28%), Positives = 72/182 (38%), Gaps = 18/182 (9%)
Frame = -2
Query: 508 TSRPVLPPPYVPRSVPLPP----CRSALAQSQQERQPGPP---PLRAALTGGRRATPAQP 350
T RPV PP P P PP + +AQ+ PP P++ + TP P
Sbjct: 103 TPRPVKKPPAAPAQTPAPPPPRPSKKPVAQAGAPAPVAPPSPRPVKRPVVAAAAPTPPTP 162
Query: 349 SPLSNP---PPRI*APTISRRTQLP-RRVGCCKHRRISMLPLQLSAPASEIARLNAAVQP 182
P+ P P + AP SR ++ P + G P ++ P+S +P
Sbjct: 163 RPVKKPPAAPAQTPAPPPSRPSKKPVAQAGA---------PAPVAPPSS---------RP 204
Query: 181 GARHS*LSRRRAGPPARRRGCPAAAPRRSGRPAPR-------ACGTARPSPRPSRTPAGG 23
R + P R P AAP S P+P+ A +A SPRP + PAG
Sbjct: 205 VKRPVVAAAAPTPPTPRPVKKPPAAPAASAPPSPKPAKKQAAAAASAPVSPRPVKQPAGT 264
Query: 22 RA 17
RA
Sbjct: 265 RA 266
Score = 45.8 bits (107), Expect = 8e-04
Identities = 65/257 (25%), Positives = 90/257 (34%), Gaps = 31/257 (12%)
Frame = -2
Query: 691 SALPAPASKRQRIQPAKLVTLRTAHTTESTLSLSQSVNLQK-------------PRCFLK 551
SA A+ +PAK + A T+ + S+ V K PR K
Sbjct: 11 SAAKRTAASANARRPAKRAVVAAATTSPAATSVPPPVRPAKRPVVPSPTPAPPPPRPSKK 70
Query: 550 RSSSGTTPLCAASITSRPV--------LPPPYVPRSVPLPPCRSALAQSQQERQPGPPPL 395
+ P A + RPV P P PR V PP A + P PPP
Sbjct: 71 PVAQAGAPAPVAPPSPRPVKRPVVAAAAPTPPTPRPVKKPPAAPA-------QTPAPPPP 123
Query: 394 RAALTGGRRATPAQPSPLSNPPPR-I*APTISRRTQLPRRVGCCKHRRISMLPLQLSAPA 218
R + +A P+P++ P PR + P ++ P K + P Q AP
Sbjct: 124 RPSKKPVAQA--GAPAPVAPPSPRPVKRPVVAAAAPTPPTPRPVK--KPPAAPAQTPAPP 179
Query: 217 SEIARLNAAVQPGARHS*LSRRRAGPPARR---RGCPAAA------PRRSGRPAPRACGT 65
Q GA PP+ R R AAA PR +P +
Sbjct: 180 PSRPSKKPVAQAGAPAP------VAPPSSRPVKRPVVAAAAPTPPTPRPVKKPPAAPAAS 233
Query: 64 ARPSPRPSRTPAGGRAA 14
A PSP+P++ A A+
Sbjct: 234 APPSPKPAKKQAAAAAS 250
>ref|XP_293372.2| similar to Ser/Arg-related nuclear matrix protein (plenty of
prolines 101-l; Ser/Arg-related nuclear matrix protein
(plenty of prolines 101-like) [Homo sapiens]
Length = 429
Score = 51.2 bits (121), Expect = 2e-05
Identities = 64/265 (24%), Positives = 96/265 (36%), Gaps = 11/265 (4%)
Frame = -2
Query: 799 TPPEEDRPMDERLNGHAPHATSIIYRKSKAKARPCRSALPAPASKRQRIQPAKLVTLRTA 620
TPP P +P ++ + + R CRS P P + Q Q
Sbjct: 187 TPPRRMPPPPRHRRSRSPGELQVVTKHKGTEKRECRSPAPKPRKRHQYRQ-------LNQ 239
Query: 619 HTTESTLSLSQSVNLQKPRCFLKRSSSGTTPLCAASITSRPVLPPPYVPRSVPLPPCRSA 440
++ + S S S + + R +K G SR P P + P
Sbjct: 240 QSSSDSGSSSSSEDERPMRSHVKNGEVGRR---RRHSPSRSASPSPQKRQKETYP----- 291
Query: 439 LAQSQQERQPGPPPLRAALTGGRRATPAQP-----SPLSNPPPRI*APTISRRTQLPRRV 275
+ +Q R P PPP R + +PA P SP P R +P R + PRR
Sbjct: 292 --RGRQRRTPSPPPTRRRWS----LSPAPPPRGHSSPTPPPRKRTPSPPSHRCSPSPRRY 345
Query: 274 GCCKHRRISMLP-----LQLSAPASEIARL-NAAVQPGARHS*LSRRRAGPPARRRGCPA 113
RR S P + S P E L + + HS ++R+ +RR
Sbjct: 346 SPPIQRRYSPSPPPKRRMASSPPLPEQRALPSPPPKHWVSHSPPPKQRSSSVTKRRSPSL 405
Query: 112 AAPRRSGRPAPRACGTARPSPRPSR 38
++ R G R+ AR SP+P++
Sbjct: 406 SSKHRKGSSPSRSTHEAR-SPQPNK 429
Score = 32.3 bits (72), Expect = 9.1
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 50 RRWPSSSASAWSRPPRA-----PRSRSRTPSAPRRRASPSSTKLAMP 175
RRW S A PPR P R RTPS P R SPS + + P
Sbjct: 306 RRWSLSPAP----PPRGHSSPTPPPRKRTPSPPSHRCSPSPRRYSPP 348
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive matrix
protein 1 [Rattus norvegicus]
Length = 958
Score = 51.2 bits (121), Expect = 2e-05
Identities = 73/263 (27%), Positives = 98/263 (36%), Gaps = 32/263 (12%)
Frame = -2
Query: 724 RKSKAKARPCRSALP-APASKRQRIQPAKLVTLRTAHTTESTLSLSQSVNLQKPRCFLKR 548
+ S RP RS + +R+R P++ + + T + + P +R
Sbjct: 548 QSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRRRRRSPSPPPARRRR 607
Query: 547 SSSGTTPLCAASITSRPVLPPPYVPRSVPLPPCRSALAQSQQERQPGPPPLRAALTGGRR 368
S S P P PPP R P PP R R P PPP R + + R
Sbjct: 608 SPSPAPP---------PPPPPPPRRRRSPTPPPR--------RRTPSPPPRRRSPSPRRY 650
Query: 367 ATPAQPSPLSNPPPRI*APTISRRTQLP-----RRVGCC--KHRRISML--PLQLSAPAS 215
+ P Q +PPP+ RRT P RR RR+S P Q S P +
Sbjct: 651 SPPIQRRYSPSPPPK-------RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVT 703
Query: 214 E------------------IARLNAAVQPGARHS*LSRRRA----GPPARRRGCPAAAPR 101
+ R + QP RHS R RA PP RRG +A+P+
Sbjct: 704 KRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGA-SASPQ 762
Query: 100 RSGRPAPRACGTARPSPRPSRTP 32
P+P + RP R SRTP
Sbjct: 763 GRQSPSP----STRPIRRVSRTP 781
Score = 37.4 bits (85), Expect = 0.28
Identities = 68/285 (23%), Positives = 99/285 (33%), Gaps = 32/285 (11%)
Frame = -2
Query: 799 TPPEEDRPMDERLNGHAPHATSIIYRKSKAKARPCRSALPAPASKRQRIQPAKLVTLRTA 620
+P + + R +P R+S + A P P P R+R P RT
Sbjct: 581 SPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPP----PPPPPPRRRRSPTPPPRRRTP 636
Query: 619 HTTESTLSLSQSVNLQKPRCF---LKRSSSGTTPLCAASITSRPVLPPPYVPRSVPLPPC 449
S S PR + ++R S + P T+ P PPP R+ P PP
Sbjct: 637 SPPPRRRSPS-------PRRYSPPIQRRYSPSPP--PKRRTASP--PPPPKRRASPSPPP 685
Query: 448 RSALAQSQQERQPGPPPL-----------RAALTGGRRATPA---QPSPLSNPPPRI*AP 311
+ ++ S +Q PP R + GR A QP+ +P PR AP
Sbjct: 686 KRRVSHSPPPKQRSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAP 745
Query: 310 TISRRTQLPRRVGCCKHRRIS----MLPLQLSAPASEIARLNAAVQPG---ARHS*LSRR 152
S + R R S P++ + E ++ A P R SR
Sbjct: 746 QTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 805
Query: 151 RAG--------PPARRRGCPAAAPRRSGRPAPRACGTARPSPRPS 41
+G PPA + +P + PA A P+P PS
Sbjct: 806 VSGSPEPTAKKPPAPPSPVQSQSPSTNWSPAAPAKKAKSPTPSPS 850
Score = 36.2 bits (82), Expect = 0.63
Identities = 61/218 (27%), Positives = 82/218 (36%), Gaps = 1/218 (0%)
Frame = -2
Query: 682 PAPASKRQRIQPAKLVTLRTAHTTESTLSLSQSVNLQKPRCFLKRSSSGTTPLCAASITS 503
P P + + P K + E T S+S + + R RS S T P S
Sbjct: 309 PEPVPEPKEPSPEK----NSKKEKEKTRPRSRSRSKSRSRT-RSRSPSHTRPRRRHRSRS 363
Query: 502 RPVLPPPYVPRSVPLPPCRSALAQSQQERQPGPPPLRAALTGGRRATPAQPSPLSNPPPR 323
R Y PR P P R+P P RR TP + P PPPR
Sbjct: 364 RS-----YSPRRRPSP-----------RRRPSP----------RRRTPPRRMP---PPPR 394
Query: 322 I*APTISRRTQLPRRVGCCKHRRISMLPLQLSAPASEIARLNAAVQPGARHS*LSRRRAG 143
RR++ P R RR S L S+ +S +R + + +R +
Sbjct: 395 ------HRRSRSPGR-----RRRRSSASLSGSSSSSSSSRSRSPPKKP------PKRTSS 437
Query: 142 PPAR-RRGCPAAAPRRSGRPAPRACGTARPSPRPSRTP 32
PP + RR P+A+P R R P + T P R S TP
Sbjct: 438 PPRKTRRLSPSASPPRR-RHRPSSPATPPPKTRHSPTP 474
