Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001128A_C01 KCC001128A_c01
(995 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P26508|NOLC_RHIFR NolC protein gi|95168|pir||S15295 nolC prot... 61 3e-08
ref|XP_322551.1| hypothetical protein [Neurospora crassa] gi|289... 60 4e-08
ref|NP_898025.1| DnaJ3 protein [Synechococcus sp. WH 8102] gi|33... 59 1e-07
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc... 59 2e-07
ref|ZP_00061661.1| COG0484: DnaJ-class molecular chaperone with ... 58 2e-07
>sp|P26508|NOLC_RHIFR NolC protein gi|95168|pir||S15295 nolC protein - Rhizobium fredii
gi|152354|gb|AAA26333.1| nodulation protein
Length = 392
Score = 61.2 bits (147), Expect = 3e-08
Identities = 43/117 (36%), Positives = 54/117 (45%)
Frame = +1
Query: 133 RTAYEVLGLDTAASRAQVKEAFLKLCQQHHPDKVPAAQRLGAEARFKEVKAAYDTILRGQ 312
R YE LG+ A ++K AF KL Q+HPD+ P Q AE FKE+ AY+T+
Sbjct: 3 RDLYETLGVARNADEKELKSAFRKLAMQYHPDRNPGDQE--AEKSFKEINQAYETL---- 56
Query: 313 AGYNVPPPGSAPNAKYARAYYRAHGMGMDFGEGGPVRCGGPFGGYATETDFYRAMFR 483
P A +Y A + GMG FG G GG GG T F R + R
Sbjct: 57 ----KDPQKRAAYDRYGHAAFEQGGMGAGFGNG---FAGGSAGG--TSRHFRRHLRR 104
>ref|XP_322551.1| hypothetical protein [Neurospora crassa] gi|28917861|gb|EAA27548.1|
hypothetical protein [Neurospora crassa]
Length = 423
Score = 60.5 bits (145), Expect = 4e-08
Identities = 38/103 (36%), Positives = 50/103 (47%), Gaps = 6/103 (5%)
Frame = +1
Query: 142 YEVLGLDTAASRAQVKEAFLKLCQQHHPDKVPAAQRLGAEARFKEVKAAYDTILRGQAGY 321
Y +LG+D +AS +K+A+ KL HHPDKVP QR AE +FK + AY+ + +
Sbjct: 14 YAILGVDKSASPNDIKKAYRKLALIHHPDKVPEDQRPEAEVKFKAIAQAYEILSDEEKRE 73
Query: 322 NVPPPGSAPNAKYARAYYRAHGMGMD------FGEGGPVRCGG 432
G A + AHG MD FG GG GG
Sbjct: 74 MYDVHGMAAFDPSRGGGHGAHGANMDDIFAAMFGMGGMGGMGG 116
>ref|NP_898025.1| DnaJ3 protein [Synechococcus sp. WH 8102]
gi|33633244|emb|CAE08449.1| DnaJ3 protein [Synechococcus
sp. WH 8102]
Length = 324
Score = 58.9 bits (141), Expect = 1e-07
Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Frame = +1
Query: 142 YEVLGLDTAASRAQVKEAFLKLCQQHHPDKVPAAQRLGAEARFKEVKAAYDTILRGQAGY 321
++VLG+D +A VK AF KL +Q+HPD P AEARFKE+ AY+ +
Sbjct: 10 FQVLGVDRSADADSVKRAFRKLARQYHPDVNPG--NASAEARFKEISEAYEVLSDPDKRR 67
Query: 322 NVPPPGSAPNAKYARAYYRAHGMGMDFGEGGPV---------RCGGPFGG 444
G N A GM +DFG G R GGP GG
Sbjct: 68 RYEQFGQYWNQSGASGGAAGPGMDVDFGRYGNFDDFIGDLLGRFGGPAGG 117
>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680] gi|29605870|dbj|BAC69934.1| putative
protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 58.5 bits (140), Expect = 2e-07
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 6/194 (3%)
Frame = +2
Query: 212 SSTTRTRCRRRSGWALRLASRRLRPHTTPSFEAKPATTCRRPAPRPMPSTPAPTTGPTAW 391
++ +R R R GW+ + P ++P P + C P P PS PA +T P W
Sbjct: 255 AAQSRGRAGRVGGWSPAVVCCTPTPWSSPCPPRPPPSCCAPRHPPPRPSWPASSTRP--W 312
Query: 392 VWILARAAPCAAAAPSAATPLRPTSTGPCSGPRATTPLCSS*RGCWPSPPSA*WCQSQTV 571
W + A A+P AA STG S R + P S G P+ WC ++
Sbjct: 313 RWSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSPP--RSGAGSRTRTPTC-WCCARR- 368
Query: 572 TRPGSGGSGTRACTCSASAHCGPTAGTRSALTPSQSAAWRTCKTRTSS-----RMRSTPT 736
SGG+ R +SA P + T A T ++ AW ++ +S RSTP+
Sbjct: 369 ----SGGTARR----RSSAGTTPASWTSRATTCARRPAWPPRRSPAASPAGPTACRSTPS 420
Query: 737 C-AKACPVWARTTP 775
+A P A T+P
Sbjct: 421 ATTRAWPASATTSP 434
Score = 53.1 bits (126), Expect = 7e-06
Identities = 53/136 (38%), Positives = 59/136 (42%), Gaps = 15/136 (11%)
Frame = +2
Query: 149 CLDSTRRPPELRLKKPF*SCASSTTRTR----CRRRSGWALRLASRRLRPHTTPSFEAKP 316
CL ST P R P S A S TRT C RRSG R RR TTP+
Sbjct: 334 CLPSTGAPSRHRRSPPR-SGAGSRTRTPTCWCCARRSGGTAR---RRSSAGTTPASWTSR 389
Query: 317 ATTC-RRPAPRPMPSTPAPTTGPTAW---------VW-ILARAAPCAAAAPSAATPLRPT 463
ATTC RRPA P S A GPTA W A +P A+PSAA +
Sbjct: 390 ATTCARRPAWPPRRSPAASPAGPTACRSTPSATTRAWPASATTSPSCPASPSAARRTTAS 449
Query: 464 STGPCSGPRATTPLCS 511
++ P S P T P S
Sbjct: 450 ASRPAS-PARTPPWSS 464
>ref|ZP_00061661.1| COG0484: DnaJ-class molecular chaperone with C-terminal Zn finger
domain [Clostridium thermocellum ATCC 27405]
Length = 386
Score = 58.2 bits (139), Expect = 2e-07
Identities = 39/111 (35%), Positives = 58/111 (52%)
Frame = +1
Query: 133 RTAYEVLGLDTAASRAQVKEAFLKLCQQHHPDKVPAAQRLGAEARFKEVKAAYDTILRGQ 312
R YE+LG+D AS A++K+A+ KL +Q+HPD P + AEA+FKE+ AY+ +
Sbjct: 5 RDYYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDK--AAEAKFKEINEAYEVL---- 58
Query: 313 AGYNVPPPGSAPNAKYARAYYRAHGMGMDFGEGGPVRCGGPFGGYATETDF 465
P A ++ + + +G FG GG GG F G + DF
Sbjct: 59 ----SDPQKRARYDQFGHSAFDPNG----FGGGG---FGGGFTGGFGDFDF 98
