KCC001126A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001126A_C01 KCC001126A_c01
gaagCCAACAATTACGCTTACCGAACAAAAGGGCAAGGCCCGCTTCCGAGGCCCAGGCTT
CCGACACCCATACCCCAAACATTTCTACAACGTGGGACCATAGTAATTGTTGTCTGGGCG
TGCGGCTTGAGCAGGAGGGGCAGGCCCCGACCAGCGAGCTGCAATGGCTTCTCAAGCAGC
AAGCCAAGCAGCAGGCCTAGGGCCACCAGCCGCGTCTCAGCCGTTTGCCGAAATCGCTGA
ACCCAGTGAGGCGGCCACTCTTCCCTCGGGCCCCGTCCTTCAAGGTCGCGTGGGCGGTCT
GCGCAGCGCTGTTATCCATATCGTGCCGGGAGAGGACCATACCGTGCATTCCAGCGAAGG
GGGCAACGAGCACTTCGGCTACGGGCTCGCCTGCACCCAGGGTCACCGCACCGGCATGGA
GGACGCTCATTCAGTGGAGCTGGATCTGGACCCGGAGACGGGGACGGCGCTCTTTGGCGT
GTTCGATGGACACGGAGGCCGTCAAGTGGCCGACTTGTGCGCCGCCAATGTGGTGGACGC
GGTGCTCTCTAGCCCGGCTACCACGAGGCGAGTGGCGAGGGCTGGCCAGGGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001126A_C01 KCC001126A_c01
         (592 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAG43835.1|AF213455_1 protein phosphatase type-2C [Zea mays]        66  4e-10
ref|NP_180079.1| protein phosphatase 2C (PP2C), putative [Arabid...    65  7e-10
ref|NP_194914.1| protein phosphatase 2C (PP2C), putative [Arabid...    63  3e-09
emb|CAD41496.1| OSJNBa0029H02.20 [Oryza sativa (japonica cultiva...    62  6e-09
gb|AAH41734.1| Similar to protein phosphatase 1G (formerly 2C), ...    61  1e-08

>gb|AAG43835.1|AF213455_1 protein phosphatase type-2C [Zea mays]
          Length = 366

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 36/70 (51%), Positives = 44/70 (62%)
 Frame = +2

Query: 350 SSEGGNEHFGYGLACTQGHRTGMEDAHSVELDLDPETGTALFGVFDGHGGRQVADLCAAN 529
           S +G N+   +GL+  QG R  MEDAHS  LDLD +  TA FGVFDGHGG+ VA  CA  
Sbjct: 14  SEDGENDKLKFGLSSMQGWRATMEDAHSALLDLDND--TASFGVFDGHGGKVVAKFCAKY 71

Query: 530 VVDAVLSSPA 559
           +   VL + A
Sbjct: 72  LHREVLHTEA 81

>ref|NP_180079.1| protein phosphatase 2C (PP2C), putative [Arabidopsis thaliana]
           gi|25355104|pir||H84643 probable protein phosphatase 2C
           [imported] - Arabidopsis thaliana
           gi|4559345|gb|AAD23006.1| putative protein phosphatase
           2C [Arabidopsis thaliana] gi|15292879|gb|AAK92810.1|
           putative protein phosphatase 2C [Arabidopsis thaliana]
           gi|18652943|dbj|BAB84700.1| protein phosphatase 2C
           [Arabidopsis thaliana] gi|20258909|gb|AAM14148.1|
           putative protein phosphatase 2C [Arabidopsis thaliana]
          Length = 355

 Score = 65.1 bits (157), Expect = 7e-10
 Identities = 33/70 (47%), Positives = 45/70 (64%)
 Frame = +2

Query: 350 SSEGGNEHFGYGLACTQGHRTGMEDAHSVELDLDPETGTALFGVFDGHGGRQVADLCAAN 529
           S +G N+   +GL+  QG R  MEDAH+  LDLD +T  + FGV+DGHGG+ VA  CA  
Sbjct: 14  SEDGENDKLRFGLSSMQGWRATMEDAHAAILDLDDKT--SFFGVYDGHGGKVVAKFCAKY 71

Query: 530 VVDAVLSSPA 559
           +   V+S+ A
Sbjct: 72  LHQQVISNEA 81

>ref|NP_194914.1| protein phosphatase 2C (PP2C), putative [Arabidopsis thaliana]
           gi|7488279|pir||T06308 protein phosphatase 2C homolog
           F11C18.60 - Arabidopsis thaliana
           gi|4584525|emb|CAB40756.1| protein phosphatase 2C-like
           protein [Arabidopsis thaliana]
           gi|7270089|emb|CAB79904.1| protein phosphatase 2C-like
           protein [Arabidopsis thaliana]
           gi|16209698|gb|AAL14406.1| AT4g31860/F11C18_60
           [Arabidopsis thaliana] gi|21360433|gb|AAM47332.1|
           AT4g31860/F11C18_60 [Arabidopsis thaliana]
          Length = 357

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = +2

Query: 350 SSEGGNEHFGYGLACTQGHRTGMEDAHSVELDLDPETGTALFGVFDGHGGRQVADLCAAN 529
           S +G N    YGL+  QG R  MEDAH+  LDLD    T+  GV+DGHGG+ V+  CA  
Sbjct: 14  SEDGENHKLRYGLSSMQGWRASMEDAHAAILDLD--DNTSFLGVYDGHGGKVVSKFCAKY 71

Query: 530 VVDAVLSSPA 559
           +   VLS  A
Sbjct: 72  LHQQVLSDEA 81

>emb|CAD41496.1| OSJNBa0029H02.20 [Oryza sativa (japonica cultivar-group)]
          Length = 330

 Score = 62.0 bits (149), Expect = 6e-09
 Identities = 33/86 (38%), Positives = 47/86 (54%)
 Frame = +2

Query: 335 DHTVHSSEGGNEHFGYGLACTQGHRTGMEDAHSVELDLDPETGTALFGVFDGHGGRQVAD 514
           D T  +  GGN    Y  +  QG+R+ MEDAH+   +LD  T T+ FGV+DGHGG  VA 
Sbjct: 12  DITKSTHSGGNTVLAYASSAMQGYRSTMEDAHATIENLDALTNTSFFGVYDGHGGSAVAR 71

Query: 515 LCAANVVDAVLSSPATTRRVARAGQG 592
           +      D +L + A ++ +   G G
Sbjct: 72  M------DEMLRNQAASKELTEYGSG 91

>gb|AAH41734.1| Similar to protein phosphatase 1G (formerly 2C),
           magnesium-dependent, gamma isoform [Xenopus laevis]
          Length = 544

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 30/67 (44%), Positives = 42/67 (61%)
 Frame = +2

Query: 350 SSEGGNEHFGYGLACTQGHRTGMEDAHSVELDLDPETGTALFGVFDGHGGRQVADLCAAN 529
           S EGG++   YG +  QG R  MEDAH+   +LD +  TA+F V+DGHGG +VA  CA  
Sbjct: 14  SGEGGSQRLTYGYSAMQGWRVSMEDAHNCIPELDSQ--TAMFSVYDGHGGEEVALYCAKY 71

Query: 530 VVDAVLS 550
           + + + S
Sbjct: 72  LPEVIKS 78



EST assemble image


clone accession position
1 HC070b11_r AV637209 1 399
2 CM054a12_r AV390030 5 365
3 CM020b02_r AV397511 9 592
4 LCL045g11_r AV628699 12 496
5 LCL022g08_r AV627213 73 547




Chlamydomonas reinhardtii
Kazusa DNA Research Institute