Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001124A_C01 KCC001124A_c01
(612 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK53449.1| unknown [Streptomyces aureofaciens] 59 4e-08
gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803] 57 2e-07
ref|NP_903634.1| conserved hypothetical protein [Chromobacterium... 54 2e-06
ref|NP_794511.1| type III effector HopPmaI(Pto) [Pseudomonas syr... 52 9e-06
emb|CAB88203.1| putative cuticular collagen [Globodera pallida] 52 9e-06
>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
Length = 579
Score = 59.3 bits (142), Expect = 4e-08
Identities = 60/156 (38%), Positives = 61/156 (38%), Gaps = 17/156 (10%)
Frame = +1
Query: 145 RGATSGRAPSRNGATAARPTGRHPRKRPMAATPHGFGKTAGADDGVRTAPN--APTAPRR 318
RGA NGA A RPT RP A P A A G R AP A T R
Sbjct: 373 RGAGVEPEGPANGAGAGRPTATSGYARPQHARP-----PARAPPGPRPAPTRAASTPART 427
Query: 319 G-----PPRRTAAPQPAPPRAPRR-------RRWQLLLLPPPPRALRFLGCAAGGGRLTP 462
G PP R AP PAP PR RR PP PRA R G AAG GR
Sbjct: 428 GSRPASPPTRPTAPSPAPAAPPRAAAAPTPARRPPPPPTPPVPRARR--GPAAGNGRPPS 485
Query: 463 GRPRTASSAPG*WSGGCPCPWAAR---*AACPPCHH 561
R RTA + G P P R PP HH
Sbjct: 486 TRDRTAGTRAPASPPGAPPPVRRRRPPPPRAPPPHH 521
Score = 48.5 bits (114), Expect = 7e-05
Identities = 44/127 (34%), Positives = 51/127 (39%), Gaps = 23/127 (18%)
Frame = +1
Query: 106 PYCSLPPPSSPP-PRGATSGRA--PSRNGATAARPTGRHPRKRPMAATPHGFGKTAGADD 276
P + PP +PP PR A + A P+R G+ A P R P A P + A A
Sbjct: 400 PQHARPPARAPPGPRPAPTRAASTPARTGSRPASPPTRPTAPSPAPAAPP---RAAAAPT 456
Query: 277 GVRTAPNAPTAP----RRGP----------------PRRTAAPQPAPPRAPRRRRWQLLL 396
R P PT P RRGP R A+P APP RRR
Sbjct: 457 PARRPPPPPTPPVPRARRGPAAGNGRPPSTRDRTAGTRAPASPPGAPPPVRRRR------ 510
Query: 397 LPPPPRA 417
PPPPRA
Sbjct: 511 -PPPPRA 516
Score = 44.7 bits (104), Expect = 0.001
Identities = 53/177 (29%), Positives = 60/177 (32%), Gaps = 30/177 (16%)
Frame = +1
Query: 31 PHIARLHGRAVTASRPGCPGQTFRLPYCSLPPPSSPPPRGATSGRAPSRNGATAARPT-G 207
P AR RA RP P + P + P+SPP R AP+ AA PT
Sbjct: 400 PQHARPPARAPPGPRPA-PTRAASTPARTGSRPASPPTRPTAPSPAPAAPPRAAAAPTPA 458
Query: 208 RHPRKRPMAATPH-------GFGKTAGADD---GVRTAPNAPTAP-----RRGPPRRT-- 336
R P P P G G+ D G R + P AP RR PP R
Sbjct: 459 RRPPPPPTPPVPRARRGPAAGNGRPPSTRDRTAGTRAPASPPGAPPPVRRRRPPPPRAPP 518
Query: 337 ------------AAPQPAPPRAPRRRRWQLLLLPPPPRALRFLGCAAGGGRLTPGRP 471
A P+P PP P PPPRA A G PG P
Sbjct: 519 PHHPSARNPSARATPRPRPPPRPSAAARP----EPPPRA------APGPSGTAPGPP 565
Score = 41.2 bits (95), Expect = 0.012
Identities = 34/101 (33%), Positives = 37/101 (35%)
Frame = +1
Query: 43 RLHGRAVTASRPGCPGQTFRLPYCSLPPPSSPPPRGATSGRAPSRNGATAARPTGRHPRK 222
R G AS PG P R PPP PP S R PS A P R P +
Sbjct: 489 RTAGTRAPASPPGAPPPVRR----RRPPPPRAPPPHHPSARNPS----ARATPRPRPPPR 540
Query: 223 RPMAATPHGFGKTAGADDGVRTAPNAPTAPRRGPPRRTAAP 345
AA P + A G TAP P+ PR P P
Sbjct: 541 PSAAARPEPPPRAAPGPSG--TAPGPPSGPRSPSPLHRRTP 579
Score = 35.8 bits (81), Expect = 0.50
Identities = 46/143 (32%), Positives = 55/143 (38%), Gaps = 9/143 (6%)
Frame = -2
Query: 548 GQAAHLAAQGQGHPPD-HYPGAEEAVRGRPGVRRPPPAAQPRKRSARGGG------GSSS 390
G A Q +G P + H A++ + R G RPP PR A G +
Sbjct: 300 GHVQQRAGQQEGPPAERHRARADDPAQRRRG--RPPATTGPRTGPAGPAGPAGPRRSAPG 357
Query: 389 NCHR-RRRGARGGAG*GAAVRRGGPRLGAVGAFGAVLTPSSAPAVLPKPCGVAAIGRFRG 213
R R RG+R GA V GP GA GA T A +P A G
Sbjct: 358 RARRIRARGSRCRCCRGAGVEPEGPANGA-GAGRPTATSGYARPQHARPPARAPPGP--- 413
Query: 212 WRPVG-RAAVAPFREGARPLVAP 147
RP RAA P R G+RP P
Sbjct: 414 -RPAPTRAASTPARTGSRPASPP 435
>gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803]
Length = 816
Score = 57.0 bits (136), Expect = 2e-07
Identities = 61/174 (35%), Positives = 69/174 (39%), Gaps = 24/174 (13%)
Frame = +1
Query: 43 RLHGRAVTASRPGCPGQTFRLPYCSLPPPSSP------PPRGATSGRAPSRNGATAARPT 204
R GR PG R+P PPP++ P RGA G AP R+G RP
Sbjct: 166 RRAGRGAPGRAPGRVPVRRRVPARPAPPPAARYRVRALPERGAPRG-APGRHGPPGLRPR 224
Query: 205 GRH--PRKRPMAATPHGFGKTAGADDGVRTAPNAPTAPR----RGPPRRTAAP------- 345
GR R+RP+ + G GVR A R RGPP R AAP
Sbjct: 225 GRGACARRRPLPVP-----RARGPPRGVRARLGRDAARRGVAARGPPARAAAPGRAGDRR 279
Query: 346 -QPAP---PRAP-RRRRWQLLLLPPPPRALRFLGCAAGGGRLTPGRPRTASSAP 492
+P P RAP R R L PPP R G A G P RPR AP
Sbjct: 280 GRPGPRPRVRAPLRPRHADGRLSPPPGRRGPPRGDARRGPPPRPRRPRPRRRAP 333
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/127 (35%), Positives = 51/127 (39%), Gaps = 8/127 (6%)
Frame = +1
Query: 136 PPPRGATSGRAPSRNGATAARPTGRHPRKRPMAATPHGFGKTAGADDGVRTAPNAPTAPR 315
PP R A GRA R G RP R P RP H G+ + G R P R
Sbjct: 265 PPARAAAPGRAGDRRGRPGPRPRVRAP-LRPR----HADGRLS-PPPGRRGPPRGDA--R 316
Query: 316 RGPPRRTAAPQP---APPRAPRR-----RRWQLLLLPPPPRALRFLGCAAGGGRLTPGRP 471
RGPP R P+P AP R+ RR RR + + PPR G G RL P
Sbjct: 317 RGPPPRPRRPRPRRRAPLRSARRGAPDARRRRRRVCRGPPRGRG--GAPRGPARLPRAPP 374
Query: 472 RTASSAP 492
A P
Sbjct: 375 PAARPGP 381
Score = 42.7 bits (99), Expect = 0.004
Identities = 57/178 (32%), Positives = 61/178 (34%), Gaps = 8/178 (4%)
Frame = -1
Query: 549 RASRSSRCPRARASA*PLSRSRRSGTRPARRKAAAASCAAEEAKRPRRRRQQQQLPSPPP 370
R R PR RA P R P RR RPRR R +++ P
Sbjct: 278 RRGRPGPRPRVRAPLRPRHADGRLSPPPGRRGPPRGDARRGPPPRPRRPRPRRRAPLRS- 336
Query: 369 RRPWRRWLRRRGAPGRTASRRRWCVWRGPDPVVGACRLAEAVWCGCHRPLPGVAASRARG 190
RRGAP RRR C RGP G A LP AR
Sbjct: 337 --------ARRGAPDARRRRRRVC--RGPPRGRGGAPRGPA-------RLPRAPPPAARP 379
Query: 189 GRPIPGGG---PAAGGAARRGARRWWKRTVGESKCLARAAGSR-----RGDRTPV*PR 40
G P PG A A RGARR R + AR R R DR PV PR
Sbjct: 380 GPPPPGRALVRARAPAARLRGARRGPPRGALRRRPRARPRVPRVLRAPRRDR-PVAPR 436
Score = 42.4 bits (98), Expect = 0.005
Identities = 56/175 (32%), Positives = 60/175 (34%), Gaps = 31/175 (17%)
Frame = +1
Query: 121 PPPSSPPPRGATSGRAPSRNGATAARPTGRHPRKRPMAATPHGFGKTAGADDGVRTAPNA 300
P P P PR RAP R+ A P R R+R P G G GA G P A
Sbjct: 321 PRPRRPRPRR----RAPLRSARRGA-PDARRRRRRVCRGPPRGRG---GAPRGPARLPRA 372
Query: 301 P------------------TAP-------RRGPPRRTAAPQP-APPRAPRRRRWQLLLLP 402
P AP RRGPPR +P A PR PR R P
Sbjct: 373 PPPAARPGPPPPGRALVRARAPAARLRGARRGPPRGALRRRPRARPRVPRVLRAPRRDRP 432
Query: 403 PPPRALRFLGCAAGGGRLTPGRPRTASSAP-----G*WSGGCPCPWAAR*AACPP 552
PR R + G PGR R P G P P AAR A P
Sbjct: 433 VAPRP-RPVRRGPPGAEARPGRRRGRRGGPPTSGLAFTQSGAPDPRAARRPATSP 486
Score = 41.6 bits (96), Expect = 0.009
Identities = 40/112 (35%), Positives = 44/112 (38%), Gaps = 1/112 (0%)
Frame = +2
Query: 38 LRGYTGVRSPRLDPAARARHLDSPTVLFHHRRA-PRRAAPPAAGPPPGMGRPPRARLAAT 214
LRG V PR P AR + L R PR+ AP A PG RPP R A
Sbjct: 76 LRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQRAPGRALGAPGRRRPPAGRRAPV 135
Query: 215 PGSGRWQPHHTASARRQAPTTGSGPRQTHQRRRDAVRPGAPRRLSQRLHGRR 370
G R A R+ P GPR RR GAP R R+ RR
Sbjct: 136 RGDRR---RGRPRAPRRGPGGRLGPRAPVCRRPRRAGRGAPGRAPGRVPVRR 184
Score = 38.1 bits (87), Expect = 0.10
Identities = 51/162 (31%), Positives = 56/162 (34%), Gaps = 17/162 (10%)
Frame = +1
Query: 55 RAVTASRPGCPGQTFRLPYCSLPPPSS-----PPPRGATSGRAPSR--NGATAARPTG-- 207
R R G P RLP PPP++ PP R RAP+ GA P G
Sbjct: 353 RGPPRGRGGAPRGPARLPRA--PPPAARPGPPPPGRALVRARAPAARLRGARRGPPRGAL 410
Query: 208 -RHPRKRPMAATPHGFGKTAGADDGVRTAP--NAPTAPRRGPPRRTAAPQPAPPRAPRRR 378
R PR RP V AP + P APR P RR A P R R
Sbjct: 411 RRRPRARPRVPR-------------VLRAPRRDRPVAPRPRPVRRGPPGAEARPGRRRGR 457
Query: 379 RWQLLLLPPPPRALRFLGCAAGGGR-----LTPGRPRTASSA 489
R PP L F A R T R R SS+
Sbjct: 458 RG-----GPPTSGLAFTQSGAPDPRAARRPATSPRSRATSSS 494
Score = 38.1 bits (87), Expect = 0.10
Identities = 52/183 (28%), Positives = 60/183 (32%), Gaps = 1/183 (0%)
Frame = -2
Query: 548 GQAAHLAAQGQGHPPDHYPGAEEAVRGRPGVRRPPPAAQPRKRSARGGGGSSSNCHRRRR 369
G+ L G P PG G PG RRPP R+ RG RRR
Sbjct: 97 GRGGGLGRLRDGRPRQRAPGR---ALGAPGRRRPPAG---RRAPVRGD---------RRR 141
Query: 368 GARGGAG*GAAVRRGGPRLGAVGAFGAVLTPSSAPAVLPKPCGVAAIGRFRGWRPVGRAA 189
G R PR G G G P + P+ G A GR G PV R
Sbjct: 142 G-----------RPRAPRRGPGGRLG----PRAPVCRRPRRAGRGAPGRAPGRVPVRRR- 185
Query: 188 VAPFREGARPLVAPRGGGLDGGGREQ*GSLNVWPGQPGRDAVTA-RPCNRAICGKKKKKK 12
P R P R L G + G PGR RP R C +++
Sbjct: 186 -VPARPAPPPAARYRVRALPERGAPR--------GAPGRHGPPGLRPRGRGACARRRPLP 236
Query: 11 KPR 3
PR
Sbjct: 237 VPR 239
Score = 36.6 bits (83), Expect = 0.29
Identities = 44/135 (32%), Positives = 48/135 (34%), Gaps = 20/135 (14%)
Frame = +1
Query: 124 PPSSPPPRGATSGRAPSRNGATAARPTGRH----PRKRPMAATPHGFGKTAGADDGVRTA 291
P + P G G R+G R GR R+RP A G+ A R
Sbjct: 89 PVARPGRVGRGGGLGRLRDGRPRQRAPGRALGAPGRRRPPA------GRRAPVRGDRRRG 142
Query: 292 PNAPTAPRRGP-------------PRRT--AAPQPAPPRAPRRRRWQLLLLPPPPRALRF 426
P APRRGP PRR AP AP R P RRR PPP R
Sbjct: 143 --RPRAPRRGPGGRLGPRAPVCRRPRRAGRGAPGRAPGRVPVRRRVPARPAPPPAARYRV 200
Query: 427 LGC-AAGGGRLTPGR 468
G R PGR
Sbjct: 201 RALPERGAPRGAPGR 215
Score = 35.0 bits (79), Expect = 0.85
Identities = 53/179 (29%), Positives = 63/179 (34%), Gaps = 24/179 (13%)
Frame = -1
Query: 501 PLSRSRRSGTRPARRKAAAASCA--AEEAKRPRR---------------RRQQQQLPSPP 373
P+ RR G A R+ A +RPRR RR+ P+PP
Sbjct: 134 PVRGDRRRGRPRAPRRGPGGRLGPRAPVCRRPRRAGRGAPGRAPGRVPVRRRVPARPAPP 193
Query: 372 PRRPWR-RWLRRRGAPGRTASRRRWCVWRGPDPVVGACRLAEAVWCGCHRPLPGVAAS-- 202
P +R R L RGAP R GP + R A C RPLP A
Sbjct: 194 PAARYRVRALPERGAPRGAPGR------HGPPGLRPRGRGA----CARRRPLPVPRARGP 243
Query: 201 ----RARGGRPIPGGGPAAGGAARRGARRWWKRTVGESKCLARAAGSRRGDRTPV*PRN 37
RAR GR G AA G R A G + G R R P+ PR+
Sbjct: 244 PRGVRARLGRDAARRGVAARGPPARAA------APGRAGDRRGRPGPRPRVRAPLRPRH 296
Score = 35.0 bits (79), Expect = 0.85
Identities = 42/133 (31%), Positives = 47/133 (34%), Gaps = 15/133 (11%)
Frame = +2
Query: 65 PRLDPAARARHLDSPTVLFHHRRAPRRAAPPAAGPPPGMGRPPRA-RLAATPGSGRWQPH 241
PR R+ +P RR R G P G R PRA AA PG P
Sbjct: 328 PRRRAPLRSARRGAPDARRRRRRVCRGPPRGRGGAPRGPARLPRAPPPAARPGP---PPP 384
Query: 242 HTASARRQAPT-----TGSGPRQTHQRRRDAVRPGAPRRLSQRLHGR---------RGGG 379
A R +AP GP + RRR RP PR L R R G
Sbjct: 385 GRALVRARAPAARLRGARRGPPRGALRRRPRARPRVPRVLRAPRRDRPVAPRPRPVRRGP 444
Query: 380 DGSCCCCRRRRGR 418
G+ RRRGR
Sbjct: 445 PGAEARPGRRRGR 457
Score = 34.3 bits (77), Expect = 1.4
Identities = 32/102 (31%), Positives = 36/102 (34%)
Frame = +1
Query: 73 RPGCPGQTFRLPYCSLPPPSSPPPRGATSGRAPSRNGATAARPTGRHPRKRPMAATPHGF 252
R PG+ P PP P R R A P GR + P+ P
Sbjct: 111 RQRAPGRALGAPGRRRPPAGRRAP--VRGDRRRGRPRAPRRGPGGRLGPRAPVCRRPRRA 168
Query: 253 GKTAGADDGVRTAPNAPTAPRRGPPRRTAAPQPAPPRAPRRR 378
G R AP AP R P RR +PAPP A R R
Sbjct: 169 G---------RGAPGR--APGRVPVRRRVPARPAPPPAARYR 199
Score = 33.1 bits (74), Expect = 3.2
Identities = 39/117 (33%), Positives = 41/117 (34%), Gaps = 10/117 (8%)
Frame = -2
Query: 494 PGAEEAVRGRPGVRRPPPAAQP-----RKRSARGGGGSSSNCHRRRRGARGGAG*GAAVR 330
PGA R R R P PA P R A G G R G G G AA
Sbjct: 15 PGAPRPGRPRGAQRAPRPAPDPPGPGRRPPRAPGALGGMLPAAGRLAGPARGRGLRAA-- 72
Query: 329 RGGPRLGAVGAFGAVLTPSSAPAVLPKPCG-VAAIGRFRGWRP----VGRAAVAPFR 174
GA+ VL P P P G +GR R RP GRA AP R
Sbjct: 73 -----SGALRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQRAPGRALGAPGR 124
Score = 32.3 bits (72), Expect = 5.5
Identities = 25/83 (30%), Positives = 35/83 (42%)
Frame = -1
Query: 552 RRASRSSRCPRARASA*PLSRSRRSGTRPARRKAAAASCAAEEAKRPRRRRQQQQLPSPP 373
R A R + PR+RA+ S +R +R+A A + A A R R + S
Sbjct: 477 RAARRPATSPRSRAT---------SSSRALKRRAVATAGAPPSASRSSTRAAAVRRRSGS 527
Query: 372 PRRPWRRWLRRRGAPGRTASRRR 304
R W R R G+P S R+
Sbjct: 528 RTRRWARTPRTTGSPTAPRSGRQ 550
Score = 32.0 bits (71), Expect = 7.2
Identities = 39/112 (34%), Positives = 45/112 (39%), Gaps = 19/112 (16%)
Frame = +1
Query: 217 RKRPMAATPHGFGKTAGADDGVRTAPNAPTAPRRGPPRRTAAPQPAPPRAPRR------- 375
R+RP A P G+ GA R AP+ P P R PPR A P A R
Sbjct: 12 RRRPGAPRP---GRPRGAQRAPRPAPDPP-GPGRRPPRAPGALGGMLPAAGRLAGPARGR 67
Query: 376 ---------RRWQLLLLP---PPPRALRFLGCAAGGGRLTPGRPRTASSAPG 495
R + +L P P R R +G G GRL GRPR APG
Sbjct: 68 GLRAASGALRGVRPVLRPRGRPVARPGR-VGRGGGLGRLRDGRPR--QRAPG 116
>ref|NP_903634.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472] gi|34105271|gb|AAQ61626.1| conserved hypothetical
protein [Chromobacterium violaceum ATCC 12472]
Length = 245
Score = 53.9 bits (128), Expect = 2e-06
Identities = 64/191 (33%), Positives = 76/191 (39%), Gaps = 20/191 (10%)
Frame = -2
Query: 548 GQAAHLAA-QGQGHPPDHYPGAEEAVRGRPGVRRPPPAAQPRKRSARGGGGSSSNCHRRR 372
G AA LAA Q GHP D PGA +A R R+ ++ + R RG + R +
Sbjct: 21 GVAAELAAHQPVGHP-DAAPGAADAAERR---RQAVELSEGKTRGGRGAAAGGTGGGRAQ 76
Query: 371 RGARGGAG*GAAVRRGGPRLGAVGAFGAVLT---PSSAPAVLP------KPCGVAAIGRF 219
R ARGGA A RRG R A G + P A L +P A GR
Sbjct: 77 RQARGGA---RAARRGIARAPARGRLPLAVDRGGPGQGRAGLAGRDGRRRPLAGAGQGRG 133
Query: 218 RGWRPVGRAAVAPFREGARPLVAPRGGGL----DGGGREQ*GSLNVWPGQ------PGRD 69
G R GRA AP + RP+ G GL G G PGQ RD
Sbjct: 134 GGRRGDGRAVPAPVGDVVRPVRRGAGRGLAAAVPGADAPGAGRRATDPGQGTEAAGGRRD 193
Query: 68 AVTARPCNRAI 36
RPC R +
Sbjct: 194 PGRRRPCRRRL 204
Score = 33.1 bits (74), Expect = 3.2
Identities = 45/155 (29%), Positives = 51/155 (32%), Gaps = 7/155 (4%)
Frame = +1
Query: 145 RGATSGRAP---SRNGATAARP--TGRHPRKRPMAATPHGFGKTAGADDGVRTAP--NAP 303
R GR P R G R GR R+RP+A G G D AP +
Sbjct: 92 RAPARGRLPLAVDRGGPGQGRAGLAGRDGRRRPLAGAGQGRGGGRRGDGRAVPAPVGDVV 151
Query: 304 TAPRRGPPRRTAAPQPAPPRAPRRRRWQLLLLPPPPRALRFLGCAAGGGRLTPGRPRTAS 483
RRG R AA P RR P + G A GGR PGR R
Sbjct: 152 RPVRRGAGRGLAAAVPGADAPGAGRR-----ATDPGQ-----GTEAAGGRRDPGRRRPCR 201
Query: 484 SAPG*WSGGCPCPWAAR*AACPPCHHEMLSAGASG 588
P P R A P +GA+G
Sbjct: 202 RR-------LPLPARQRTACRPRAAGAAAGSGAAG 229
>ref|NP_794511.1| type III effector HopPmaI(Pto) [Pseudomonas syringae pv. tomato
str. DC3000] gi|28855145|gb|AAO58206.1| type III
effector HopPmaI(Pto) [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 488
Score = 51.6 bits (122), Expect = 9e-06
Identities = 50/164 (30%), Positives = 63/164 (37%), Gaps = 24/164 (14%)
Frame = +1
Query: 70 SRPGCPGQTFRLPYCSLPPPSSPPPRGATSGRAP-------------SRNGATAARPTGR 210
+RP P +T + PPP PR A SGR +R A + P
Sbjct: 239 ARPETPPRTRPQANSTPPPPPKAEPRPA-SGRPDGAQQQARPETPPRTRPQANSTPPPPP 297
Query: 211 HPRKRPMAATPHGFGKTAGADDGVRTAPNAPTAPRRGPPRRTAAPQPAP----------- 357
RP + P G + A + RT P A +AP PP A P+PA
Sbjct: 298 KAEPRPASGRPDGAQQQARPETPPRTRPQANSAP---PPPPKAEPRPASGRPDGTQQQAR 354
Query: 358 PRAPRRRRWQLLLLPPPPRALRFLGCAAGGGRLTPGRPRTASSA 489
P P R R Q PPPP +AGG R + RP S+A
Sbjct: 355 PETPPRTRPQANSAPPPPPKAE---PSAGGERPSTARPNNTSAA 395
Score = 43.5 bits (101), Expect = 0.002
Identities = 45/149 (30%), Positives = 56/149 (37%), Gaps = 19/149 (12%)
Frame = +1
Query: 22 FFLPHIARLHGRAVTASRPGCPGQTFRLPYCSLPPPSSPP------PRGATSGRAP---- 171
F+ P+ A+ R T PG Q P PPP + P P GA P
Sbjct: 191 FWRPYGAQQQARPQTP--PGTRPQANSAPP---PPPKAEPRPASGRPDGAQQQARPETPP 245
Query: 172 -SRNGATAARPTGRHPRKRPMAATPHGFGKTAGADDGVRTAPNA---PTAPRRGPPRRTA 339
+R A + P RP + P G + A + RT P A P P + PR +
Sbjct: 246 RTRPQANSTPPPPPKAEPRPASGRPDGAQQQARPETPPRTRPQANSTPPPPPKAEPRPAS 305
Query: 340 -----APQPAPPRAPRRRRWQLLLLPPPP 411
A Q A P P R R Q PPPP
Sbjct: 306 GRPDGAQQQARPETPPRTRPQANSAPPPP 334
Score = 31.6 bits (70), Expect = 9.4
Identities = 32/104 (30%), Positives = 37/104 (34%), Gaps = 18/104 (17%)
Frame = +1
Query: 220 KRPMAATPHGFGKTAGADDGVR------TAPNAPTAPRRGPPRRTAAPQPA--------- 354
+RPM P F + GA R T P A +AP PP A P+PA
Sbjct: 184 RRPM---PEPFWRPYGAQQQARPQTPPGTRPQANSAP---PPPPKAEPRPASGRPDGAQQ 237
Query: 355 ---PPRAPRRRRWQLLLLPPPPRALRFLGCAAGGGRLTPGRPRT 477
P PR R PPPP+A G RP T
Sbjct: 238 QARPETPPRTRPQANSTPPPPPKAEPRPASGRPDGAQQQARPET 281
>emb|CAB88203.1| putative cuticular collagen [Globodera pallida]
Length = 300
Score = 51.6 bits (122), Expect = 9e-06
Identities = 52/156 (33%), Positives = 60/156 (38%), Gaps = 9/156 (5%)
Frame = +1
Query: 82 CPGQTFRLPYCSLPPPSSP-------PPRGATSGRAPSRNGATAARPTGRHPRKRPMAAT 240
CP QT P C PP P PP GA AP++ G P G +
Sbjct: 136 CPAQTVPCPRCPAGPPGRPGGQGPAGPPGGAGQPGAPAQGGGQG--PPGPPGPQGAPGQP 193
Query: 241 PHGFGKTAGADDGVRTAPNAPTAPRRGPPRRTAAP-QPAPPRAPRRRRWQLLLLPP-PPR 414
HG G G AP + P GP + AP Q P AP + PP PP
Sbjct: 194 GHGGGPGQPGQPG---APAVVSRPIPGPKGPSGAPGQNGNPGAPGQPGQPGGEGPPGPPG 250
Query: 415 ALRFLGCAAGGGRLTPGRPRTASSAPG*WSGGCPCP 522
A G G G+ PG+P PG SG CPCP
Sbjct: 251 APGQPGRPGGSGQ--PGQP-GGPGQPGKDSGYCPCP 283
Score = 32.0 bits (71), Expect = 7.2
Identities = 32/102 (31%), Positives = 39/102 (37%), Gaps = 5/102 (4%)
Frame = +1
Query: 76 PGCPGQTFRLPYCSLPPPSSPPPRGATSGRAPSRNGATAA-----RPTGRHPRKRPMAAT 240
PG PGQ S P P P G AP +NG A +P G P P A
Sbjct: 199 PGQPGQPGAPAVVSRPIPGPKGPSG-----APGQNGNPGAPGQPGQPGGEGPPGPPGA-- 251
Query: 241 PHGFGKTAGADDGVRTAPNAPTAPRRGPPRRTAAPQPAPPRA 366
P G+ G+ P P P G P + + P PPR+
Sbjct: 252 PGQPGRPGGSGQ-----PGQPGGP--GQPGKDSGYCPCPPRS 286
