Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001119A_C01 KCC001119A_c01
(718 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_875426.1| Uncharacterized membrane protein [Prochlorococc... 47 3e-04
ref|NP_440851.1| unknown protein [Synechocystis sp. PCC 6803] gi... 43 0.004
dbj|BAB32911.1| P0666G04.13 [Oryza sativa (japonica cultivar-gro... 42 0.010
ref|NP_681096.1| ORF_ID:tsr0305~hypothetical protein [Thermosyne... 41 0.016
gb|AAK49004.1| USC3-5p [Myxococcus xanthus] 40 0.036
>ref|NP_875426.1| Uncharacterized membrane protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375] gi|33238012|gb|AAQ00079.1|
Uncharacterized membrane protein [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 55
Score = 47.0 bits (110), Expect = 3e-04
Identities = 22/42 (52%), Positives = 29/42 (68%)
Frame = +1
Query: 307 KGQGTAIVTGAISAILGLAYLALVAFMDQRGGQMLPPPPEAL 432
+G+ AI+TGA S + + YL L+ +D R G MLPPPPEAL
Sbjct: 7 RGKLVAIITGAFSIFIAITYLILITILDAR-GPMLPPPPEAL 47
>ref|NP_440851.1| unknown protein [Synechocystis sp. PCC 6803] gi|7470672|pir||S77428
hypothetical protein ssr2060 - Synechocystis sp. (strain
PCC 6803) gi|1652610|dbj|BAA17531.1|
ORF_ID:ssr2060~unknown protein [Synechocystis sp. PCC
6803]
Length = 79
Score = 43.1 bits (100), Expect = 0.004
Identities = 23/44 (52%), Positives = 30/44 (67%)
Frame = +1
Query: 301 LQKGQGTAIVTGAISAILGLAYLALVAFMDQRGGQMLPPPPEAL 432
+ G+ AIVTGAIS IL +AYL LV +D R G+M+P P E +
Sbjct: 19 MDSGKIVAIVTGAISIILAVAYLVLVQILDFR-GEMVPAPMETM 61
>dbj|BAB32911.1| P0666G04.13 [Oryza sativa (japonica cultivar-group)]
Length = 162
Score = 42.0 bits (97), Expect = 0.010
Identities = 32/73 (43%), Positives = 33/73 (44%), Gaps = 1/73 (1%)
Frame = +2
Query: 158 LAAVQGAGEPPRCAPSRRRLSRPLPSRRPPPPLAKRLR*RRSTPALRCCKRARARPSSPA 337
LAA PPRC R P P R PPPP A + P R C R R RPS P
Sbjct: 20 LAAAANLIPPPRCRRPRPSPPPPQP-RLPPPPPASHAAADLAHP--RRCSRRRPRPSPPP 76
Query: 338 LFPP-SWASPTSR 373
L PP SP SR
Sbjct: 77 LQPPLPPPSPASR 89
>ref|NP_681096.1| ORF_ID:tsr0305~hypothetical protein [Thermosynechococcus elongatus
BP-1] gi|22294026|dbj|BAC07858.1|
ORF_ID:tsr0305~hypothetical protein [Thermosynechococcus
elongatus BP-1]
Length = 51
Score = 41.2 bits (95), Expect = 0.016
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 310 GQGTAIVTGAISAILGLAYLALVAFMDQRGGQMLPPPPEALIP 438
G+ AIVTGAIS +LG+ YL LV +D RG P P L+P
Sbjct: 7 GKWVAIVTGAISLLLGIGYLVLVQLLDWRGDWQ--PAPLGLLP 47
>gb|AAK49004.1| USC3-5p [Myxococcus xanthus]
Length = 575
Score = 40.0 bits (92), Expect = 0.036
Identities = 56/192 (29%), Positives = 69/192 (35%), Gaps = 30/192 (15%)
Frame = -1
Query: 595 SAQVSPLNPASVDAVRPREHCWLRRHHSTACDADPPKPPGLGYGTTVQRLPL-----RGS 431
+A+V P PA R R R C P P T P R
Sbjct: 118 TARVPPAGPA-----RRRSPSRSRNRWRLRCGTRPAPAPWAAMTTVAGSAPAPARPARAV 172
Query: 430 GPQEE-EVASAPRAGP*KQPAR---GRRGPG-----W-------RK*RR*RWPC-----P 314
P+ + +APRAGP PA G PG W R+ RR PC P
Sbjct: 173 LPRAPLQRTAAPRAGPSGCPAARCPGSCPPGAGRSSWPMQYRRARRVRRPSPPCRLPAPP 232
Query: 313 GPF----AAAERWRRPSSPQSFRQRWRGPPAWEWPAQSAPARRAPRRLTRALHSCEGAAE 146
GP A+A RW R + + R R R P + A +P R TR +S E A
Sbjct: 233 GPCQRRAASAVRWHRHAQCPARRWRSRTAPRRSVHTRDTSAACSPMRATRRRNSNETAPI 292
Query: 145 RRDCETRLEMGC 110
+C T E C
Sbjct: 293 STNCGTSCEPAC 304
