>KCC001119A_C01 KCC001119A_c01
aattCTTGAACGTTGCAGTCTACCGTTGAAGCTTCAATACTTCGCGAGCTCAGGCGACCC
CCAACCACACCTCTAAAACCTCCGCTAAGAAAATTATGATGCTCACTCAGCAGCCCATTT
CTAGCCGTGTTTCGCAATCGCGTCGCTCTGCGGCCCCCTCGCAGCTGTGCAAGGCGCGGG
TGAGCCTCCGCGGTGCGCGCCGAGCAGGCGCCGACTGAGCCGGCCACTCCCAAGCCGGAG
GCCCCCTCCACCTCTGGCGAAAAGATTGAGGTGAAGAAGGTCGACGCCAGCGCTCCGCTG
CTGCAAAAGGGCCAGGGCACGGCCATCGTCACCGGCGCTATTTCCGCCATCCTGGGCCTC
GCCTACCTCGCGCTGGTTGCTTTCATGGACCAGCGCGGGGGGCAGATGCTACCTCCTCCT
CCTGAGGCCCTGATCCCCTAAGTGGCAGGCGCTGAACAGTAGTGCCATAGCCCAGGCCTG
GGGGTTTGGGTGGGTCAGCGTCACATGCGGTTGAGTGGTGCCTACGCAGCCAACAGTGCT
CGCGTGGACGAACGGCGTCAACTGAAGCAGGGTTTAGCGGCGACACCTGTGCACTCCTCA
TCAGGGTCAGGCCATGATACAATACTGTCTGTCGGTGAAGCTGTCCACTTACTGGGTGGG
ATGCACGGGCGTGTGGCCGGTTGCGATGCCCGCGGATGGCTGCGGAGGGTAAGCTTGT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001119A_C01 KCC001119A_c01
         (718 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_875426.1| Uncharacterized membrane protein [Prochlorococc...    47  3e-04
ref|NP_440851.1| unknown protein [Synechocystis sp. PCC 6803] gi...    43  0.004
dbj|BAB32911.1| P0666G04.13 [Oryza sativa (japonica cultivar-gro...    42  0.010
ref|NP_681096.1| ORF_ID:tsr0305~hypothetical protein [Thermosyne...    41  0.016
gb|AAK49004.1| USC3-5p [Myxococcus xanthus]                            40  0.036

>ref|NP_875426.1| Uncharacterized membrane protein [Prochlorococcus marinus subsp.
           marinus str. CCMP1375] gi|33238012|gb|AAQ00079.1|
           Uncharacterized membrane protein [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 55

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 22/42 (52%), Positives = 29/42 (68%)
 Frame = +1

Query: 307 KGQGTAIVTGAISAILGLAYLALVAFMDQRGGQMLPPPPEAL 432
           +G+  AI+TGA S  + + YL L+  +D R G MLPPPPEAL
Sbjct: 7   RGKLVAIITGAFSIFIAITYLILITILDAR-GPMLPPPPEAL 47

>ref|NP_440851.1| unknown protein [Synechocystis sp. PCC 6803] gi|7470672|pir||S77428
           hypothetical protein ssr2060 - Synechocystis sp. (strain
           PCC 6803) gi|1652610|dbj|BAA17531.1|
           ORF_ID:ssr2060~unknown protein [Synechocystis sp. PCC
           6803]
          Length = 79

 Score = 43.1 bits (100), Expect = 0.004
 Identities = 23/44 (52%), Positives = 30/44 (67%)
 Frame = +1

Query: 301 LQKGQGTAIVTGAISAILGLAYLALVAFMDQRGGQMLPPPPEAL 432
           +  G+  AIVTGAIS IL +AYL LV  +D R G+M+P P E +
Sbjct: 19  MDSGKIVAIVTGAISIILAVAYLVLVQILDFR-GEMVPAPMETM 61

>dbj|BAB32911.1| P0666G04.13 [Oryza sativa (japonica cultivar-group)]
          Length = 162

 Score = 42.0 bits (97), Expect = 0.010
 Identities = 32/73 (43%), Positives = 33/73 (44%), Gaps = 1/73 (1%)
 Frame = +2

Query: 158 LAAVQGAGEPPRCAPSRRRLSRPLPSRRPPPPLAKRLR*RRSTPALRCCKRARARPSSPA 337
           LAA      PPRC   R     P P R PPPP A       + P  R C R R RPS P 
Sbjct: 20  LAAAANLIPPPRCRRPRPSPPPPQP-RLPPPPPASHAAADLAHP--RRCSRRRPRPSPPP 76

Query: 338 LFPP-SWASPTSR 373
           L PP    SP SR
Sbjct: 77  LQPPLPPPSPASR 89

>ref|NP_681096.1| ORF_ID:tsr0305~hypothetical protein [Thermosynechococcus elongatus
           BP-1] gi|22294026|dbj|BAC07858.1|
           ORF_ID:tsr0305~hypothetical protein [Thermosynechococcus
           elongatus BP-1]
          Length = 51

 Score = 41.2 bits (95), Expect = 0.016
 Identities = 22/43 (51%), Positives = 27/43 (62%)
 Frame = +1

Query: 310 GQGTAIVTGAISAILGLAYLALVAFMDQRGGQMLPPPPEALIP 438
           G+  AIVTGAIS +LG+ YL LV  +D RG     P P  L+P
Sbjct: 7   GKWVAIVTGAISLLLGIGYLVLVQLLDWRGDWQ--PAPLGLLP 47

>gb|AAK49004.1| USC3-5p [Myxococcus xanthus]
          Length = 575

 Score = 40.0 bits (92), Expect = 0.036
 Identities = 56/192 (29%), Positives = 69/192 (35%), Gaps = 30/192 (15%)
 Frame = -1

Query: 595 SAQVSPLNPASVDAVRPREHCWLRRHHSTACDADPPKPPGLGYGTTVQRLPL-----RGS 431
           +A+V P  PA     R R     R      C   P   P     T     P      R  
Sbjct: 118 TARVPPAGPA-----RRRSPSRSRNRWRLRCGTRPAPAPWAAMTTVAGSAPAPARPARAV 172

Query: 430 GPQEE-EVASAPRAGP*KQPAR---GRRGPG-----W-------RK*RR*RWPC-----P 314
            P+   +  +APRAGP   PA    G   PG     W       R+ RR   PC     P
Sbjct: 173 LPRAPLQRTAAPRAGPSGCPAARCPGSCPPGAGRSSWPMQYRRARRVRRPSPPCRLPAPP 232

Query: 313 GPF----AAAERWRRPSSPQSFRQRWRGPPAWEWPAQSAPARRAPRRLTRALHSCEGAAE 146
           GP     A+A RW R +   + R R R  P      +   A  +P R TR  +S E A  
Sbjct: 233 GPCQRRAASAVRWHRHAQCPARRWRSRTAPRRSVHTRDTSAACSPMRATRRRNSNETAPI 292

Query: 145 RRDCETRLEMGC 110
             +C T  E  C
Sbjct: 293 STNCGTSCEPAC 304

EST assemble image

clone accession position 1 LC037h04_r AV621565 1 509 2 HC017b12_r AV633137 5 507 3 MX008d10_r BP086418 5 317 4 MX021g07_r BP086972 5 496 5 HC012f12_r AV632797 5 486 6 CM096f01_r AV392758 17 429 7 MX055d06_r BP088253 25 369 8 CM019f06_r AV387361 26 611 9 LC001d12_r AV618925 40 524 10 HC011g08_r AV632720 281 665 11 HC084a03_r AV638257 282 723

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