Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001116A_C01 KCC001116A_c01
(563 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||I84499 zinc finger protein RIZ - rat gi|949996|gb|AAA74468.... 44 0.001
ref|NP_496431.1| ankyrin and PDZ/DHR/GLGF domain and sterile alp... 44 0.002
ref|NP_056950.2| retinoblastoma protein-binding zinc finger prot... 44 0.002
pir||I38902 retinoblastoma binding protein RIZ - human 44 0.002
ref|NP_036363.2| retinoblastoma protein-binding zinc finger prot... 44 0.002
>pir||I84499 zinc finger protein RIZ - rat gi|949996|gb|AAA74468.1| zinc finger
protein RIZ
Length = 1706
Score = 44.3 bits (103), Expect = 0.001
Identities = 36/94 (38%), Positives = 51/94 (53%), Gaps = 1/94 (1%)
Frame = -3
Query: 306 AVPKHCPAGYALRPAATPSPKPLLPSSSSVPPAP-PLPDAGPLLLAAAPAPYLLSSIQSH 130
A P+ CP+ ++ A SP P+L S +V P+P P+P PL+ AA+P P LSS S
Sbjct: 994 ASPQQCPSPFSNTTAQ--SPLPIL--SPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSS 1049
Query: 129 NSHCWLCFSARSAGTGGGSRSTLSKLSKLEVSSG 28
+S F + S + S LS +S + VSSG
Sbjct: 1050 SS----SFPSSSCSSTSPSPPPLSAVSSV-VSSG 1078
>ref|NP_496431.1| ankyrin and PDZ/DHR/GLGF domain and sterile alpha motif SAM (122.6
kD) (2L676) [Caenorhabditis elegans]
gi|7496894|pir||T19673 hypothetical protein C33B4.3 -
Caenorhabditis elegans gi|3874621|emb|CAA88324.1|
Hypothetical protein C33B4.3 [Caenorhabditis elegans]
Length = 1110
Score = 43.9 bits (102), Expect = 0.002
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 13/112 (11%)
Frame = -3
Query: 438 PCPPRSYGVLHC*QHAANNM*HAHPQLLGSAQRLGRTQRGRQSLAVPK------HCPAGY 277
P PP + H + HP L SA Q+ + S+ P HC
Sbjct: 726 PPPPMQHQ-----NHQNHQYQQQHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHCEPTM 780
Query: 276 A---LRPAAT----PSPKPLLPSSSSVPPAPPLPDAGPLLLAAAPAPYLLSS 142
P +T P P PL P SS PP PP P G L+ AA AP L+S+
Sbjct: 781 VHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAASAPVLMSN 832
>ref|NP_056950.2| retinoblastoma protein-binding zinc finger protein isoform b;
retinoblastoma protein-binding zinc finger protein;
zinc-finger DNA-binding protein; retinoblastoma
protein-interacting zinc finger protein; MTE-binding
protein [Homo sapiens]
Length = 1682
Score = 43.5 bits (101), Expect = 0.002
Identities = 39/96 (40%), Positives = 52/96 (53%), Gaps = 1/96 (1%)
Frame = -3
Query: 312 SLAVPKHCPAGYALRPAATPSPKPLLPSSSSVPPAP-PLPDAGPLLLAAAPAPYLLSSIQ 136
S A P CP+ L A SP P+L S +V P+P P+P PL+ AA+P P LSS
Sbjct: 1000 SSASPHPCPS--PLSNATAQSPLPIL--SPTVSPSPSPIPPVEPLMSAASPGPPTLSSSS 1055
Query: 135 SHNSHCWLCFSARSAGTGGGSRSTLSKLSKLEVSSG 28
S +S FS+ S+ + S LS +S + VSSG
Sbjct: 1056 SSSSSS-SSFSS-SSSSSSPSPPPLSAISSV-VSSG 1088
>pir||I38902 retinoblastoma binding protein RIZ - human
Length = 1721
Score = 43.5 bits (101), Expect = 0.002
Identities = 39/96 (40%), Positives = 52/96 (53%), Gaps = 1/96 (1%)
Frame = -3
Query: 312 SLAVPKHCPAGYALRPAATPSPKPLLPSSSSVPPAP-PLPDAGPLLLAAAPAPYLLSSIQ 136
S A P CP+ L A SP P+L S +V P+P P+P PL+ AA+P P LSS
Sbjct: 1003 SSASPHPCPS--PLSNATAQSPLPIL--SPTVSPSPSPIPPVEPLMSAASPGPPTLSSSS 1058
Query: 135 SHNSHCWLCFSARSAGTGGGSRSTLSKLSKLEVSSG 28
S +S FS+ S+ + S LS +S + VSSG
Sbjct: 1059 SSSSSS-SSFSS-SSSSSSPSPPPLSAISSV-VSSG 1091
>ref|NP_036363.2| retinoblastoma protein-binding zinc finger protein isoform a;
retinoblastoma protein-binding zinc finger protein;
zinc-finger DNA-binding protein; retinoblastoma
protein-interacting zinc finger protein; MTE-binding
protein [Homo sapiens]
Length = 1718
Score = 43.5 bits (101), Expect = 0.002
Identities = 39/96 (40%), Positives = 52/96 (53%), Gaps = 1/96 (1%)
Frame = -3
Query: 312 SLAVPKHCPAGYALRPAATPSPKPLLPSSSSVPPAP-PLPDAGPLLLAAAPAPYLLSSIQ 136
S A P CP+ L A SP P+L S +V P+P P+P PL+ AA+P P LSS
Sbjct: 1000 SSASPHPCPS--PLSNATAQSPLPIL--SPTVSPSPSPIPPVEPLMSAASPGPPTLSSSS 1055
Query: 135 SHNSHCWLCFSARSAGTGGGSRSTLSKLSKLEVSSG 28
S +S FS+ S+ + S LS +S + VSSG
Sbjct: 1056 SSSSSS-SSFSS-SSSSSSPSPPPLSAISSV-VSSG 1088
