KCC001092A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001092A_C01 KCC001092A_c01
AAGGCAAACTGTCAACAGTCGCAAACCCAAGTACCAAATTCTCAAGAAAAATCTGTTGCA
ATTGAAACGCCAGCAAAATTCGCACTTCTCGGCTGACAAAGCAAGCCCTAACCAGCCAAG
CTTCGCGTGCCGAAGCATCCTCGCTCGCTTGTCCAAAACGTCAGAATGACTTCCGAGGTT
CCCACCACCAGCCGGCAAGGCAGCGTGGTGCCCTTCACTCGCATTGAGGGCCCCGACGCC
TGGGTTGCGGCCGACTTCCCGAACCTTGAGAAGGAAATGTTTCACCTGACGCCCGAGCAC
ATCGCCGAGCTTGATGCAGCCGTGGACAAGGTCATTGCAAGCGGCAAGCCCCTGCAGGAG
GTGTCCCTGGCTGATGTCCACCTGCCCACGCTATCGCTGCCGCTGATTGATGTGGGTCAG
CAGGCTCAGCACGGCCGCGGCTGGTCGCTGCTGCGCGGCGTGCCCGTGCAGCGCTACAGC
CGCCAGCAGCAGCTGACGGCCTGGTGGATCCTGGGGCTGCACTGGGGCCGCGCCGTGCCC
CAGAACGCCAAGGGCCACCTGATCGGACACATCAAGGACCTGGGTCGCGACCCCGCTGAC
CCCAACACTCGCCTCTACGCCACCAACGCCGCACAGCCCTGGCACAACGACGGCCCGGCA
GACCTCGTGGGCCTGCTGTGCCTGTCTGACGGCGCTGAGGGCGGCGAGAGCGGCTGGTCG
TCTTCAATCTCCGTGCACAACGAGATCCTGCGGACCGCGCCGCACCTGGCGCGCGTGCTG
GCTGACTCGTGGTTCTTTGACCGCAAGGGCGAGGTGCCTGCGGGCAAGAAGCCCTTCTTC
GAGATCCCCGTGTTCAACTACCACAAGGGCTACCTGTCCGTCAACTACAGCGACAACTAC
TACCACCTCAGCCAGCGCCACGCCGAGGTGCCGCGCCTGGGACCCGACCACCACGCCGCC
ATGGAGCTGTTCAACTCGCTGGCGTGCTCGCAGCAGCTGTCGCTGCGCCACATCCTGCAG
CCGGGGGACGTGCAGCTGCTCAGCAACCACACCTGCCTGCACTACCGCGGCGCGTTCAGG
GACAGCCCCGAGCACACGCGGCACCTGCTGCGGCTGTGGGTGTCGCCGCCCGACGACCGG
CCGCTTGCCGAGGTGTACAGCGAAATCATGGGCCGGCAGTGTGGTGCCGCGGCAAGCGCG
GAGGCATCTTCATCCAGAACGGAGCCGACCACAACCCCATCCCGCTGGAGGCCGAGTAAG
GCCGGAGTACGGAATGACAGAACCCCAGAGGCCGCAGCATGAGGGTATGCCCACGGGGTA
TGCCAGCTAAACTTATTTGCTAACTTATCCAGAGTTTGTGCAACGTTGATTGATTATTTT
GAGGGGCTGGTGCGCAATTGTGCCGCACGCTTGGGCAACCTGCCAGATGGCCAAAATGGT
ATTGAGAGGTGACATTTATTGTTCCGTATGGCCGTTCATCAATCAAGCGGCTGCTTGGTA
TTCATGTAC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001092A_C01 KCC001092A_c01
(1509 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_879728.1| conserved hypothetical protein [Bordetella pert... 214 3e-54
ref|NP_885326.1| conserved hypothetical protein [Bordetella para... 214 4e-54
ref|NP_890089.1| conserved hypothetical protein [Bordetella bron... 214 4e-54
ref|XP_326550.1| predicted protein [Neurospora crassa] gi|183761... 177 3e-43
ref|NP_929451.1| hypothetical protein [Photorhabdus luminescens ... 129 1e-28
>ref|NP_879728.1| conserved hypothetical protein [Bordetella pertussis]
gi|33571728|emb|CAE41228.1| conserved hypothetical
protein [Bordetella pertussis]
Length = 357
Score = 214 bits (546), Expect = 3e-54
Identities = 126/306 (41%), Positives = 170/306 (55%), Gaps = 10/306 (3%)
Frame = +1
Query: 259 PNLEKE----MFHLTPEHIAELDAAVDKVIASGKPLQEVSLADVHLPTLSLPLIDVGQQA 426
P L+K + HLT + +LD AV + A GK + E+S D L L L V +
Sbjct: 24 PQLDKHPEYWVHHLTGPELEQLDRAVRRADAGGKDITELSQDDFELGELGQRLQHVKHEV 83
Query: 427 QHGRGWSLLRGVPVQRYSRQQQLTAWWILGLHWGRAVPQNAKGHLIGHIKDLGRDPADPN 606
HGRG L+RGVPV++Y+ +Q A+W LG + G V QN KGH++GH+ +LG D AD
Sbjct: 84 LHGRGLYLIRGVPVEQYTMRQSAIAFWALGTNLGLPVSQNGKGHVLGHVANLGLDYADAA 143
Query: 607 TRLYATNAAQPWHNDGPADLVGLLCLSDGAEGGESGWSSSISVHNEILRTAPHLARVLAD 786
R Y T+ P+H D +D+VGLLC+ GG S SS +V NE+ P AR L D
Sbjct: 144 VRGYQTSNRLPYHTDS-SDIVGLLCVRPAKAGGLSSVVSSTTVWNELAARHPEHARTLLD 202
Query: 787 SWFFDRKGEVPAGKKPFFEIPVFNYHKGYLSVNYSDNYYHLSQRHAEVPRLGPDHHAAME 966
S+ R GE+P G+KP+ PVF ++G + NY + +Q VPRL + A++
Sbjct: 203 SFHRTRWGEIPEGQKPYSSSPVFAPYQGRMYANYVRSAIRKAQALPSVPRLSAQQNEALD 262
Query: 967 LFNSLACSQQLSLRHILQPGDVQLLSNHTCLHYRGAFRDSP--EHTRHLLRLWVS----P 1128
++L C L L +PGDVQLLSN T H R A+ D P E RHLLRLW++ P
Sbjct: 263 CLDALTCDPALYLDMDFKPGDVQLLSNFTIFHSRTAYEDWPETERRRHLLRLWLACEGGP 322
Query: 1129 PDDRPL 1146
P PL
Sbjct: 323 PIPEPL 328
>ref|NP_885326.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33574111|emb|CAE38438.1| conserved hypothetical
protein [Bordetella parapertussis]
Length = 357
Score = 214 bits (544), Expect = 4e-54
Identities = 126/306 (41%), Positives = 169/306 (55%), Gaps = 10/306 (3%)
Frame = +1
Query: 259 PNLEKE----MFHLTPEHIAELDAAVDKVIASGKPLQEVSLADVHLPTLSLPLIDVGQQA 426
P L+K + HLT + +LD AV A GK + E+S D L L L V +
Sbjct: 24 PQLDKHPEYWVHHLTGPELEQLDRAVRHADAGGKDITELSQDDFELGELGQRLQQVKHEV 83
Query: 427 QHGRGWSLLRGVPVQRYSRQQQLTAWWILGLHWGRAVPQNAKGHLIGHIKDLGRDPADPN 606
HGRG L+RGVPV++Y+ +Q A+W LG + G V QN KGH++GH+ +LG D AD
Sbjct: 84 LHGRGLYLIRGVPVEQYTMRQSAIAFWALGTNLGLPVSQNGKGHVLGHVANLGLDYADAA 143
Query: 607 TRLYATNAAQPWHNDGPADLVGLLCLSDGAEGGESGWSSSISVHNEILRTAPHLARVLAD 786
R Y T+ P+H D +D+VGLLC+ GG S SS +V NE+ P AR L D
Sbjct: 144 VRGYQTSNRLPYHTDS-SDIVGLLCVRPAKAGGLSSVVSSTTVWNELAARHPEHARTLLD 202
Query: 787 SWFFDRKGEVPAGKKPFFEIPVFNYHKGYLSVNYSDNYYHLSQRHAEVPRLGPDHHAAME 966
S+ R GE+P G+KP+ PVF ++G + NY + +Q VPRL + A++
Sbjct: 203 SFHRTRWGEIPEGQKPYSSSPVFAPYQGRMYANYVRSAIRKAQALPSVPRLSAQQNEALD 262
Query: 967 LFNSLACSQQLSLRHILQPGDVQLLSNHTCLHYRGAFRDSP--EHTRHLLRLWVS----P 1128
++L C L L +PGDVQLLSN T H R A+ D P E RHLLRLW++ P
Sbjct: 263 CLDALTCDPALYLDMDFKPGDVQLLSNFTIFHSRTAYEDWPETERRRHLLRLWLACEGGP 322
Query: 1129 PDDRPL 1146
P PL
Sbjct: 323 PIPEPL 328
>ref|NP_890089.1| conserved hypothetical protein [Bordetella bronchiseptica]
gi|33576968|emb|CAE34048.1| conserved hypothetical
protein [Bordetella bronchiseptica]
Length = 357
Score = 214 bits (544), Expect = 4e-54
Identities = 126/306 (41%), Positives = 169/306 (55%), Gaps = 10/306 (3%)
Frame = +1
Query: 259 PNLEKE----MFHLTPEHIAELDAAVDKVIASGKPLQEVSLADVHLPTLSLPLIDVGQQA 426
P L+K + HLT + +LD AV A GK + E+S D L L L V +
Sbjct: 24 PQLDKHPEYWVHHLTGPELEQLDRAVRHADAGGKDITELSQDDFELGELGQRLQQVKHEV 83
Query: 427 QHGRGWSLLRGVPVQRYSRQQQLTAWWILGLHWGRAVPQNAKGHLIGHIKDLGRDPADPN 606
HGRG L+RGVPV++Y+ +Q A+W LG + G V QN KGH++GH+ +LG D AD
Sbjct: 84 LHGRGLYLIRGVPVEQYTMRQSAIAFWALGTNLGLPVSQNGKGHVLGHVANLGLDYADAA 143
Query: 607 TRLYATNAAQPWHNDGPADLVGLLCLSDGAEGGESGWSSSISVHNEILRTAPHLARVLAD 786
R Y T+ P+H D +D+VGLLC+ GG S SS +V NE+ P AR L D
Sbjct: 144 VRGYQTSNRLPYHTDS-SDIVGLLCVRPAKAGGLSSVVSSTTVWNELTARHPEHARTLLD 202
Query: 787 SWFFDRKGEVPAGKKPFFEIPVFNYHKGYLSVNYSDNYYHLSQRHAEVPRLGPDHHAAME 966
S+ R GE+P G+KP+ PVF ++G + NY + +Q VPRL + A++
Sbjct: 203 SFHRTRWGEIPEGQKPYSSSPVFAPYQGRMYANYVRSAIRKAQALPSVPRLSAQQNEALD 262
Query: 967 LFNSLACSQQLSLRHILQPGDVQLLSNHTCLHYRGAFRDSP--EHTRHLLRLWVS----P 1128
++L C L L +PGDVQLLSN T H R A+ D P E RHLLRLW++ P
Sbjct: 263 CLDALTCDPALYLDMDFKPGDVQLLSNFTIFHSRTAYEDWPETERRRHLLRLWLACEGGP 322
Query: 1129 PDDRPL 1146
P PL
Sbjct: 323 PIPEPL 328
>ref|XP_326550.1| predicted protein [Neurospora crassa] gi|18376172|emb|CAD21289.1|
conserved hypothetical protein [Neurospora crassa]
gi|28923217|gb|EAA32433.1| predicted protein [Neurospora
crassa]
Length = 409
Score = 177 bits (450), Expect = 3e-43
Identities = 114/315 (36%), Positives = 164/315 (51%), Gaps = 11/315 (3%)
Frame = +1
Query: 223 IEGPDAWVAADFPNLEKEMFH-LTPEHIAELDAAVDKVIASGKPLQEVSLADVHLPTLSL 399
I GP W DF N + H T E + EL D IASG PL +S + LP L
Sbjct: 64 IAGPTVWKREDFVNNPERWVHPFTDEEVQELSDTADAFIASGTPLTGISQENFPLPKLGT 123
Query: 400 PLIDVGQQAQHGRGWSLLRGVPVQRYSRQQQLTAWWILGLHWGRAVPQNAKGHLIGHIKD 579
L ++ +G+G+ L + P + ++ A+ LG + G + QN +GH++GH+KD
Sbjct: 124 VLTNLRDDLLNGKGFILFKRFPADVWGAEKNAVAYMGLGTYLGYFLSQNGRGHVLGHVKD 183
Query: 580 LGRDPADPNT-RLYATNAAQPWHNDGPADLVGLLCLSDGAEGGESGWSSSISVHNEILRT 756
+G DP +T R+Y T A Q +H D D+VGLLC+ EGGES S V N + +
Sbjct: 184 VGDDPTQIHTVRIYRTTARQFFHAD-DGDIVGLLCVHRAQEGGESDIVSVHHVWNTLQQE 242
Query: 757 APHLARVLADS-WFFDRKGEVPAGKKPFFEIPVF---NYHKGYLSVNYSDNYYHLSQRHA 924
P +A +L W+FDRKGEV G++ + PV N KG L + Y R +
Sbjct: 243 HPDVAELLTKPIWYFDRKGEVSEGQQEWVRQPVVYLENGGKGRLYCKWDPYYVKSLTRFS 302
Query: 925 E---VPRLGPDHHAAMELFNSLACSQQLSLRHILQPGDVQLLSNHTCLHYRGAFRD--SP 1089
+ +P L + AM++ Q+L+L IL+ GD+Q LSN LH R A++D P
Sbjct: 303 DKGLIPALSEEQLRAMQILEETC--QRLALHMILEVGDIQFLSNAHLLHARTAYKDFAPP 360
Query: 1090 EHTRHLLRLWVSPPD 1134
RHLLRLW++ P+
Sbjct: 361 APRRHLLRLWLATPE 375
>ref|NP_929451.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36785537|emb|CAE14486.1| unnamed protein product
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 335
Score = 129 bits (324), Expect = 1e-28
Identities = 84/311 (27%), Positives = 157/311 (50%), Gaps = 4/311 (1%)
Frame = +1
Query: 226 EGPDAWVAADFPNLEKEMFHLTPEHIAELDAAVDKVIASGKPLQEVSLADVHLPTLSLPL 405
+ P W +A + + + ++ E I + + +P + + +D +++
Sbjct: 10 DDPAVWCSAQLESKKDVLLPVSDEQIEAFRHHLSAM--EDRPSEAFNASDFSFEEITILQ 67
Query: 406 IDVGQQAQHGRGWSLLRGVPVQRYSRQQQLTAWWILGLHWGRAVPQNAKGHLIGHIKDLG 585
+ Q+ GRG ++ G+P + ++ +W +G GR V QN++GH IGH+++
Sbjct: 68 ERIHQRLTEGRGVVVVSGIPREMFTDSILSHLFWGIGTGLGRPVVQNSQGHRIGHVRN-- 125
Query: 586 RDPADPNTRLYATNAAQPWHNDGPADLVGLLCLSDGAEGGESGWSSSISVHNEILRTAPH 765
+ +PN R Y +N +H+D ++VGL+CL + A GG + S ++++N++LR P
Sbjct: 126 -EKNNPNNRGYMSNRELGFHSDA-FEIVGLMCLREAASGGLTQIVSGLAIYNQMLREKPE 183
Query: 766 LARVLADSWFFDRKGEVPAGKKPF--FEIPVFNYHKGYLSVNYSDNYYHLSQRHAEVPRL 939
L L + + + E + K P+ ++IP+F+ G +S Y + A++ L
Sbjct: 184 LLDALFEGYHY-ATAERSSSKLPYTSYKIPIFSKMSGRVSSMCLGAYMRAA---AKLQGL 239
Query: 940 G-PDH-HAAMELFNSLACSQQLSLRHILQPGDVQLLSNHTCLHYRGAFRDSPEHTRHLLR 1113
PD A + F + + L +L+PG++ L+N+T LH R F+D + RHLLR
Sbjct: 240 ALPDALDAGLHAFYEICSRPEFRLEFMLEPGEILFLNNYTTLHSRTEFQDDALNQRHLLR 299
Query: 1114 LWVSPPDDRPL 1146
LW+ D RP+
Sbjct: 300 LWIELSDGRPV 310
EST assemble image
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clone |
accession |
position |
| 1 |
LC016b05_r |
AV620006 |
1 |
503 |
| 2 |
LCL015g08_r |
AV626807 |
122 |
593 |
| 3 |
MX057h07_r |
BP088336 |
124 |
486 |
| 4 |
LC090d12_r |
AV625288 |
142 |
633 |
| 5 |
MX254h09_r |
BP092495 |
142 |
631 |
| 6 |
MX232c02_r |
BP090995 |
170 |
485 |
| 7 |
MX249d11_r |
BP092076 |
189 |
632 |
| 8 |
HCL054e03_r |
AV642598 |
191 |
642 |
| 9 |
LC036f06_r |
AV621475 |
390 |
928 |
| 10 |
MX005c10_r |
BP086264 |
402 |
645 |
| 11 |
HC040b08_r |
AV634962 |
637 |
1158 |
| 12 |
CM016h01_r |
AV387445 |
728 |
1338 |
| 13 |
CM028a10_r |
AV387726 |
728 |
1320 |
| 14 |
HCL021d05_r |
AV640728 |
1109 |
1605 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute