KCC001090A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001090A_C01 KCC001090A_c01
TGAGGCCGACGCAAGCGTTTGGCCTGAAGAACCCTCGCGCGCTTTCTGCACCGGAAACTT
GTGCTCTTTCGACACGCCCGCGTCCTTTAAAAGAAGATTTCGGAAACTGGCATCAAAGAT
GGCGCCCATTACAGGCGTGTTTGTCAACTCGCGCAAGCAGAAGCTGCACACGCTCAAATA
CGCGGCAAAGGGTACCCCGGTGGCCGAGCTCTTCATCCACCACGGTCTCGCGGAGCACTG
CGGCCGCTATGACAACGTGTGCCAGACGCTGGCAGACCAGTGCATCGAGGTGAACACCTA
CGATGCGCACGGGCACGGCAAGTCGGAGCCGACGGAGGAGGCCGGGCGCGCCTTCATTGG
CAACTACAAGCACCTGGTGGATGACATGTGCGACTTCATGGACTTTGTCCACAAGAATGA
GTCCGCGTCCGCGGCCCCGGCACCCGATGCCGGCTCGGCCGCCGAGGCCTCCGCCCCTGC
TGCTGnCGCCCCCGCGCACGGGCAGCTGGCAGTGTTTGTGCTGGGGCACAGCATGGGTGG
CTGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001090A_C01 KCC001090A_c01
         (544 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_612511.1| monoglyceride lipase [Rattus norvegicus] gi|196...    63  3e-09
ref|NP_035974.1| monoglyceride lipase; EST AA589436 [Mus musculu...    61  8e-09
ref|NP_009214.1| monoglyceride lipase; lysophospholipase-like [H...    55  5e-07
emb|CAC43316.1| monoglyceride lipase [Homo sapiens]                    55  5e-07
gb|AAH49487.1| Unknown (protein for MGC:56561) [Danio rerio]           52  4e-06

>ref|NP_612511.1| monoglyceride lipase [Rattus norvegicus] gi|19697886|gb|AAL87453.1|
           monoglyceride lipase [Rattus norvegicus]
          Length = 303

 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 41/133 (30%), Positives = 61/133 (45%)
 Frame = +2

Query: 143 VNSRKQKLHTLKYAAKGTPVAELFIHHGLAEHCGRYDNVCQTLADQCIEVNTYDAHGHGK 322
           VN+  Q L    +   GTP A +F+ HG  EHCGRYD + Q L    + V  +D  GHG+
Sbjct: 23  VNADGQYLFCRYWKPSGTPKALIFVSHGAGEHCGRYDELAQMLKRLDMLVFAHDHVGHGQ 82

Query: 323 SEPTEEAGRAFIGNYKHLVDDMCDFMDFVHKNESASAAPAPDAGSAAEASAPAAXAPAHG 502
           S    E  R  + +++  V D+   ++ V K+                          + 
Sbjct: 83  S----EGERMVVSDFQVFVRDLLQHVNTVQKD--------------------------YP 112

Query: 503 QLAVFVLGHSMGG 541
           ++ VF+LGHSMGG
Sbjct: 113 EVPVFLLGHSMGG 125

>ref|NP_035974.1| monoglyceride lipase; EST AA589436 [Mus musculus]
           gi|2632162|emb|CAA04544.1| monoglyceride lipase [Mus
           musculus] gi|15617372|emb|CAC69874.1| monoglyceride
           lipase [Mus musculus] gi|34786023|gb|AAH57965.1| Mgll
           protein [Mus musculus]
          Length = 303

 Score = 61.2 bits (147), Expect = 8e-09
 Identities = 39/133 (29%), Positives = 59/133 (44%)
 Frame = +2

Query: 143 VNSRKQKLHTLKYAAKGTPVAELFIHHGLAEHCGRYDNVCQTLADQCIEVNTYDAHGHGK 322
           VN+  Q L    +   GTP A +F+ HG  EHCGRYD +   L    + V  +D  GHG+
Sbjct: 23  VNADGQYLFCRYWKPSGTPKALIFVSHGAGEHCGRYDELAHMLKGLDMLVFAHDHVGHGQ 82

Query: 323 SEPTEEAGRAFIGNYKHLVDDMCDFMDFVHKNESASAAPAPDAGSAAEASAPAAXAPAHG 502
           S    E  R  + +++  V D+   +D + K+                          + 
Sbjct: 83  S----EGERMVVSDFQVFVRDVLQHVDTIQKD--------------------------YP 112

Query: 503 QLAVFVLGHSMGG 541
            + +F+LGHSMGG
Sbjct: 113 DVPIFLLGHSMGG 125

>ref|NP_009214.1| monoglyceride lipase; lysophospholipase-like [Homo sapiens]
           gi|1763011|gb|AAB39616.1| lysophospholipase homolog
           [Homo sapiens] gi|12653555|gb|AAH00551.1| Monoglyceride
           lipase [Homo sapiens] gi|13623261|gb|AAH06230.1|AAH06230
           lysophospholipase-like [Homo sapiens]
          Length = 313

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 39/133 (29%), Positives = 58/133 (43%)
 Frame = +2

Query: 143 VNSRKQKLHTLKYAAKGTPVAELFIHHGLAEHCGRYDNVCQTLADQCIEVNTYDAHGHGK 322
           VN+  Q L    +   GTP A +F+ HG  EH GRY+ + + L    + V  +D  GHG+
Sbjct: 33  VNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQ 92

Query: 323 SEPTEEAGRAFIGNYKHLVDDMCDFMDFVHKNESASAAPAPDAGSAAEASAPAAXAPAHG 502
           S    E  R  + ++   V D+   +D + K+                          + 
Sbjct: 93  S----EGERMVVSDFHVFVRDVLQHVDSMQKD--------------------------YP 122

Query: 503 QLAVFVLGHSMGG 541
            L VF+LGHSMGG
Sbjct: 123 GLPVFLLGHSMGG 135

>emb|CAC43316.1| monoglyceride lipase [Homo sapiens]
          Length = 303

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 39/133 (29%), Positives = 58/133 (43%)
 Frame = +2

Query: 143 VNSRKQKLHTLKYAAKGTPVAELFIHHGLAEHCGRYDNVCQTLADQCIEVNTYDAHGHGK 322
           VN+  Q L    +   GTP A +F+ HG  EH GRY+ + + L    + V  +D  GHG+
Sbjct: 23  VNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQ 82

Query: 323 SEPTEEAGRAFIGNYKHLVDDMCDFMDFVHKNESASAAPAPDAGSAAEASAPAAXAPAHG 502
           S    E  R  + ++   V D+   +D + K+                          + 
Sbjct: 83  S----EGERMVVSDFHVFVRDVLQHVDSMQKD--------------------------YP 112

Query: 503 QLAVFVLGHSMGG 541
            L VF+LGHSMGG
Sbjct: 113 GLPVFLLGHSMGG 125

>gb|AAH49487.1| Unknown (protein for MGC:56561) [Danio rerio]
          Length = 300

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 37/133 (27%), Positives = 56/133 (41%)
 Frame = +2

Query: 143 VNSRKQKLHTLKYAAKGTPVAELFIHHGLAEHCGRYDNVCQTLADQCIEVNTYDAHGHGK 322
           VN+    L    +   G P A +++ HG  EHCG Y ++  +L    I V  +D  GHG+
Sbjct: 23  VNADGLHLFCRYWEPDGPPKALVYVAHGAGEHCGGYADIAHSLTQHGILVFAHDHVGHGQ 82

Query: 323 SEPTEEAGRAFIGNYKHLVDDMCDFMDFVHKNESASAAPAPDAGSAAEASAPAAXAPAHG 502
           S    E  R  + N++  V D    +D +                             + 
Sbjct: 83  S----EGERMELKNFQIYVRDSLQHIDIMKAR--------------------------YP 112

Query: 503 QLAVFVLGHSMGG 541
           +LAVF++GHSMGG
Sbjct: 113 KLAVFIVGHSMGG 125



EST assemble image


clone accession position
1 MX246e05_r BP091926 1 571
2 HC082c09_r AV638128 90 505
3 CM016g09_r AV387486 92 645




Chlamydomonas reinhardtii
Kazusa DNA Research Institute