Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001089A_C01 KCC001089A_c01
(926 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_079268.1| hypothetical protein FLJ12547 [Homo sapiens] gi... 44 0.005
ref|XP_284582.1| RIKEN cDNA B230220N19 gene [Mus musculus] 40 0.055
dbj|BAC31276.1| unnamed protein product [Mus musculus] 40 0.055
ref|NP_042981.1| Hypothetical protein [Human herpesvirus 6] gi|8... 38 0.28
gb|AAL55824.1|AF318317_1 unknown [Homo sapiens] 37 0.36
>ref|NP_079268.1| hypothetical protein FLJ12547 [Homo sapiens]
gi|10434098|dbj|BAB14128.1| unnamed protein product
[Homo sapiens]
Length = 307
Score = 43.5 bits (101), Expect = 0.005
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLCDSFNTRCECMHVQGVHMQT 583
CVC+CVWV ++C C LC +W H+C C C+ V G QT
Sbjct: 230 CVCLCVWV--HICVCVCLC--VWVHICVCV---CACVCVAGPGCQT 268
Score = 41.6 bits (96), Expect = 0.019
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLC 526
CVC CVWV + VC +C +W H+C
Sbjct: 214 CVCACVWVHICVCVPVCVCLCVWVHIC 240
Score = 40.4 bits (93), Expect = 0.042
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTC------AVLCPVIWPHLC 526
CVC+CVWV + VC C +C +W H+C
Sbjct: 192 CVCLCVWVHICVCVCLCVWVHICVCACVWVHIC 224
Score = 38.5 bits (88), Expect = 0.16
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLCDSFNTR 544
CVC+CVWV + VC CA +C V P C + N R
Sbjct: 242 CVCLCVWVHICVCVCACVC-VAGPG-CQTLNKR 272
Score = 35.8 bits (81), Expect = 1.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 449 VCVCVWVRLYVCTCAVLCPVIWPHLCDSFNTRCECMHV 562
VCVC+ V +++C C LC +W H+C C C+ V
Sbjct: 191 VCVCLCVWVHICVCVCLC--VWVHIC-----VCACVWV 221
Score = 35.0 bits (79), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (58%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLC 526
CVC CVW +VC CA +C + +C
Sbjct: 156 CVCACVWGCTFVCVCACVCGCTFVCVC 182
Score = 33.9 bits (76), Expect = 4.0
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIW 514
CVCVC+ V ++C C +C +W
Sbjct: 128 CVCVCLCVGAHLCVCLCVCACVW 150
Score = 33.9 bits (76), Expect = 4.0
Identities = 14/29 (48%), Positives = 18/29 (61%), Gaps = 2/29 (6%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVI--WPHLC 526
CVC CVWV ++C CA +C + HLC
Sbjct: 63 CVCACVWV--HICVCASVCVPVCGGAHLC 89
Score = 32.7 bits (73), Expect = 8.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +2
Query: 449 VCVCVWVRLYVCTCAVLCP----VIWPHLC 526
VC+CVWV ++C C +C +W H+C
Sbjct: 3 VCLCVWV--HICVCVPVCVGAHLCVWVHIC 30
Score = 32.7 bits (73), Expect = 8.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 8/35 (22%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCP--------VIWPHLC 526
CVC CV +VC CA +C +W H+C
Sbjct: 168 CVCACVCGCTFVCVCACVCGCTFVCVCLCVWVHIC 202
Score = 32.7 bits (73), Expect = 8.8
Identities = 16/44 (36%), Positives = 23/44 (51%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLCDSFNTRCECMHVQGVHM 577
CVC CV +VC CA +C + +C + C C+ V G H+
Sbjct: 99 CVCACVCGCTFVCVCACVCGCLC--VCGAHLCVCVCLCV-GAHL 139
>ref|XP_284582.1| RIKEN cDNA B230220N19 gene [Mus musculus]
Length = 111
Score = 40.0 bits (92), Expect = 0.055
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLC-------DSFNTRCEC 553
CVCVC++V +YVC C LC + +C +N +CEC
Sbjct: 54 CVCVCMYVCMYVCLCVHLCVCVCVCVCVCVYTWTCRYNGKCEC 96
Score = 36.6 bits (83), Expect = 0.61
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Frame = +2
Query: 446 CVCVCVW----VRLYVCTCAVLC--PVIWPHLCDSFNTRCECMHV 562
CVCVC++ V +YVC C LC ++ H+C C CM+V
Sbjct: 22 CVCVCIYMCVCVHIYVCFCMYLCEYECVYVHVC-----VCVCMYV 61
>dbj|BAC31276.1| unnamed protein product [Mus musculus]
Length = 134
Score = 40.0 bits (92), Expect = 0.055
Identities = 16/35 (45%), Positives = 19/35 (53%), Gaps = 8/35 (22%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVL--------CPVIWPHLC 526
CVC CVW+ +YVC CA L C +W LC
Sbjct: 56 CVCECVWIPVYVCVCACLWVPVYVCVCASVWVPLC 90
Score = 35.4 bits (80), Expect = 1.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLC 526
CVC CVWV +YVC C + ++ +C
Sbjct: 44 CVCACVWVPVYVCVCECVWIPVYVCVC 70
>ref|NP_042981.1| Hypothetical protein [Human herpesvirus 6]
gi|854065|emb|CAA58337.1| U88 [Human herpesvirus 6]
Length = 413
Score = 37.7 bits (86), Expect = 0.28
Identities = 17/37 (45%), Positives = 20/37 (53%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLCDSFNTRCECM 556
CVCVCV V L VC C LC + +C + C CM
Sbjct: 272 CVCVCVCVCLCVCLCVCLCVCVCVCVCLLCMSLCMCM 308
Score = 33.1 bits (74), Expect = 6.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLCDSFNTRCECMHV 562
CVC+CV V L VC C LC + +C C C+ V
Sbjct: 254 CVCLCVCVCLCVCLCVCLCVCVCVCVC-----LCVCLCV 287
Score = 33.1 bits (74), Expect = 6.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLCDSFNTRCECMHV 562
CVCVCV V + VC C +C + LC C C+ V
Sbjct: 238 CVCVCVCVCVCVCVCVCVCLCVCVCLCVCL---CVCLCV 273
Score = 33.1 bits (74), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 446 CVCVCVWVRLYVCTCAVLCPVIWPHLC 526
CVCVCV V + VC C +C + LC
Sbjct: 232 CVCVCVCVCVCVCVCVCVCVCVCVCLC 258
>gb|AAL55824.1|AF318317_1 unknown [Homo sapiens]
Length = 400
Score = 37.4 bits (85), Expect = 0.36
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 449 VCVCVWVRLYVCTCAVLCPVIWPHLC 526
VCVC+ V LYVC C LC ++ +C
Sbjct: 74 VCVCICVHLYVCVCVCLCACVYACVC 99
Score = 35.4 bits (80), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (52%), Gaps = 4/43 (9%)
Frame = +2
Query: 446 CVCVCVWVRLY----VCTCAVLCPVIWPHLCDSFNTRCECMHV 562
C+C+CV V +Y VC C +C + H+C +C+HV
Sbjct: 121 CMCICVHVSMYVCASVCACVCVCVCVCVHVCMRVCAH-QCLHV 162
