KCC001067A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001067A_C01 KCC001067A_c01
AGACCTCATAGATCACTGCCTGAAGAGAGATGGCCCCTCTTCCTTTCGCTGTGGTGCTTC
CCGGCTTGGGCGAGGTTTCTAGCTTTGAAGACGTGGGCAAGAAGTGGCACGCCTGGCTGG
ACACTCAGGATGTAGCGGTTCAGGTCCTTGTTACCGGCCTGCAGTCGTCGATTCAGGGTG
GCGCCATCGGCTATATGTTTGGCAGCATCAGCGCCATCGACCCCACTCAGAATGGCACTG
CGCCCAAGCCGGCGAACCCAGCTCTGGACAGCATGATGAAGGCAGGGCCGTGGGGCACCG
CGCGCAATCTGGCGGCCCCTGACGGGTGTGCAAGCCGCCGCTACCCTGGCGATCAAGAAG
GCGCGCAACGGCAAGGAGGATGTGTACAGCTCGATGGCCGCCTCGTTTCTGTCGGGTGTG
GCCTACTCGCTCGTGAGCGGCTCGCCCAACCCGATCCAGAGCGCTATCACCACCGGTGCC
GCGTTCGGCCTGTTCAACGGCCTAATCTACCAGGTGGGCCAGGCGTTCAAGCCTGAGTTT
GCCGACACGGAGTACGACCGCGGCAAGTACATGCTCAAGACCCTGGGCCTGACGAAATAC
GTGGACAACCTCAAGAAGGGTCTGCTGACCGACAACACCATCATGCTGTGGAACGACATC
GCCCTGGCCGAGGTGCGCATCCCGCCCGGCCCCCGGCTGCTCATCCTGCACCACCTGGAC
ACCTACCGCAACCCCAGCTCCGTGCTCAAACCCGCGCTGCCACTGCCGCCGCTGCCACCC
CCGCCGCCTCCCATGGCGGCGGCCGCCGCCGGCGCGTCAGGGCGGTAGATGCTGCCAGGA
CGAGCCGCGGAGCTGCGCCCTGGTGCGACAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001067A_C01 KCC001067A_c01
         (872 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_190525.1| expressed protein [Arabidopsis thaliana] gi|112...   116  7e-33
emb|CAE05370.1| OJ000315_02.15 [Oryza sativa (japonica cultivar-...   131  2e-29
gb|AAM65866.1| unknown [Arabidopsis thaliana]                         122  8e-27
ref|NP_197853.1| expressed protein [Arabidopsis thaliana] gi|101...   122  8e-27
gb|AAF23950.1| NTR [Herpesvirus papio]                                 40  4e-06

>ref|NP_190525.1| expressed protein [Arabidopsis thaliana] gi|11285728|pir||T46233
           hypothetical protein T9C5.150 - Arabidopsis thaliana
           gi|6561956|emb|CAB62460.1| putative protein [Arabidopsis
           thaliana] gi|13430558|gb|AAK25901.1|AF360191_1 unknown
           protein [Arabidopsis thaliana]
           gi|21553682|gb|AAM62775.1| unknown [Arabidopsis
           thaliana] gi|25054947|gb|AAN71950.1| unknown protein
           [Arabidopsis thaliana]
          Length = 261

 Score =  116 bits (290), Expect(2) = 7e-33
 Identities = 66/135 (48%), Positives = 86/135 (62%), Gaps = 2/135 (1%)
 Frame = +1

Query: 319 LTGVQAAATLAIKKARNGKEDVYSSMAASFLSGVAYSLVS-GSPNPIQSAITTGAAFGLF 495
           +TGV A     +K+ R GKED+ S++ A+  SG AYSLVS G      +AITT A F +F
Sbjct: 117 ITGVNAGIASVMKRIR-GKEDIESAVVAALGSGFAYSLVSQGLQGQPMNAITTAAGFAVF 175

Query: 496 NGLIYQVGQAF-KPEFADTEYDRGKYMLKTLGLTKYVDNLKKGLLTDNTIMLWNDIALAE 672
            G+ +++G+ F KP   D  + RG+ ML  LGL KY  N KKGLLTD T+ L  D AL +
Sbjct: 176 QGVFFKLGERFSKPSTEDPFFTRGRTMLVKLGLEKYEKNFKKGLLTDPTLPLLTDSALKD 235

Query: 673 VRIPPGPRLLILHHL 717
             IPPGPRL+IL H+
Sbjct: 236 ANIPPGPRLMILDHI 250

 Score = 47.4 bits (111), Expect(2) = 7e-33
 Identities = 31/86 (36%), Positives = 43/86 (49%), Gaps = 5/86 (5%)
 Frame = +3

Query: 84  FEDVGKKWHAWLDTQDVAVQVLVTGLQSSIQGGAIGYMFGSISAIDPTQNGTAPKPANPA 263
           F++V   +  WL  Q + V+  V    S +QG  IG + G++S   P Q G  P+    A
Sbjct: 39  FKEVETNFKTWLSKQSIPVEAAVVSTMSGVQGAFIGGLMGTLSPEMP-QAGVDPQ----A 93

Query: 264 LDSMMKA-----GPWGTARNLAAPDG 326
           + SM +A     GPW  ARN AA  G
Sbjct: 94  IASMKQAQALVGGPWVQARNFAAITG 119

>emb|CAE05370.1| OJ000315_02.15 [Oryza sativa (japonica cultivar-group)]
          Length = 275

 Score =  131 bits (329), Expect = 2e-29
 Identities = 73/144 (50%), Positives = 94/144 (64%), Gaps = 8/144 (5%)
 Frame = +1

Query: 319 LTGVQAAATLAIKKARNGKEDV-----YSSMAASFLSGVAYSLVSG--SPNPIQSAITTG 477
           +TG  A  +  +++ R G EDV     + SMAA+F SG  +S+VSG  SPNP+ +AITTG
Sbjct: 122 MTGANAGISCVMRRIR-GVEDVQGSAHFDSMAAAFGSGALFSIVSGMGSPNPVANAITTG 180

Query: 478 AAFGLFNGLIYQVGQAF-KPEFADTEYDRGKYMLKTLGLTKYVDNLKKGLLTDNTIMLWN 654
            AF +F G  + +GQ F +P   D  Y RG+ MLK LGL  Y  N KKGLLTD T+ L N
Sbjct: 181 VAFAVFQGGFFMIGQKFSQPPSEDIYYSRGRNMLKQLGLQNYEKNFKKGLLTDQTLPLLN 240

Query: 655 DIALAEVRIPPGPRLLILHHLDTY 726
           D AL +V+IPPGPRLLIL H+  +
Sbjct: 241 DSALRDVKIPPGPRLLILDHIQRF 264

 Score = 38.1 bits (87), Expect = 0.19
 Identities = 36/123 (29%), Positives = 47/123 (37%), Gaps = 17/123 (13%)
 Frame = +3

Query: 111 AWLDTQDVAVQVLVTGLQSSIQGGAIGYMFGSISAIDPTQNGTAPKPANP------ALDS 272
           AWL  Q   V+  V     ++QGGA+G + G+++   P      P P  P      AL S
Sbjct: 45  AWLAKQPTHVEAAVATAVGAVQGGALGGLMGTLA---PDGGSPFPVPQPPPGADPNALAS 101

Query: 273 MMKA-----GPWGTARNLAAPDG------CASRRYPGDQEGAQRQGGCVQLDGRLVSVGC 419
             +A     GP   ARN A   G      C  RR      G +   G    D    + G 
Sbjct: 102 FKQAQALAGGPLVQARNFAVMTGANAGISCVMRRI----RGVEDVQGSAHFDSMAAAFGS 157

Query: 420 GLL 428
           G L
Sbjct: 158 GAL 160

>gb|AAM65866.1| unknown [Arabidopsis thaliana]
          Length = 246

 Score =  122 bits (306), Expect = 8e-27
 Identities = 70/135 (51%), Positives = 88/135 (64%), Gaps = 2/135 (1%)
 Frame = +1

Query: 319 LTGVQAAATLAIKKARNGKEDVYSSMAASFLSGVAYSLVS-GSPNPIQSAITTGAAFGLF 495
           +TGV A     +K+ R GKED+ S++ A+F SGVAYSLVS G      +AITT A F +F
Sbjct: 99  ITGVNAGIACVMKRIR-GKEDLESAVVAAFGSGVAYSLVSAGLQGQPMNAITTAAGFAVF 157

Query: 496 NGLIYQVGQAF-KPEFADTEYDRGKYMLKTLGLTKYVDNLKKGLLTDNTIMLWNDIALAE 672
            G+ +++G+ F KP   D  Y RG+ ML  LGL KY  N KKGLL D T+ L  D AL +
Sbjct: 158 QGVFFKLGERFSKPSVEDPYYTRGRSMLLKLGLEKYEKNFKKGLLADPTLPLLTDSALRD 217

Query: 673 VRIPPGPRLLILHHL 717
           V IPPGPRLLIL H+
Sbjct: 218 VSIPPGPRLLILDHI 232

 Score = 38.5 bits (88), Expect = 0.15
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
 Frame = +3

Query: 84  FEDVGKKWHAWLDTQDVAVQVLVTGLQSSIQGGAIGYMFGSISAIDPTQNGTAPKP-ANP 260
           F+++   + +WL  Q + V+  V      +QG  IG + G++S   P Q G  P+  A+ 
Sbjct: 21  FKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTLSPEMP-QAGIDPQAMASL 79

Query: 261 ALDSMMKAGPWGTARNLAAPDG------CASRRYPGDQE 359
                +  GP   ARN AA  G      C  +R  G ++
Sbjct: 80  KQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGKED 118

>ref|NP_197853.1| expressed protein [Arabidopsis thaliana]
           gi|10177865|dbj|BAB11217.1|
           emb|CAB62460.1~gene_id:K18P6.19~similar to unknown
           protein [Arabidopsis thaliana]
           gi|17979479|gb|AAL50076.1| AT5g24650/K18P6_19
           [Arabidopsis thaliana] gi|22655440|gb|AAM98312.1|
           At5g24650/K18P6_19 [Arabidopsis thaliana]
          Length = 259

 Score =  122 bits (306), Expect = 8e-27
 Identities = 70/135 (51%), Positives = 88/135 (64%), Gaps = 2/135 (1%)
 Frame = +1

Query: 319 LTGVQAAATLAIKKARNGKEDVYSSMAASFLSGVAYSLVS-GSPNPIQSAITTGAAFGLF 495
           +TGV A     +K+ R GKED+ S++ A+F SGVAYSLVS G      +AITT A F +F
Sbjct: 112 ITGVNAGIACVMKRIR-GKEDLESAVVAAFGSGVAYSLVSAGLQGQPMNAITTAAGFAVF 170

Query: 496 NGLIYQVGQAF-KPEFADTEYDRGKYMLKTLGLTKYVDNLKKGLLTDNTIMLWNDIALAE 672
            G+ +++G+ F KP   D  Y RG+ ML  LGL KY  N KKGLL D T+ L  D AL +
Sbjct: 171 QGVFFKLGERFSKPSVEDPYYTRGRSMLLKLGLEKYEKNFKKGLLADPTLPLLTDSALRD 230

Query: 673 VRIPPGPRLLILHHL 717
           V IPPGPRLLIL H+
Sbjct: 231 VSIPPGPRLLILDHI 245

 Score = 38.5 bits (88), Expect = 0.15
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
 Frame = +3

Query: 84  FEDVGKKWHAWLDTQDVAVQVLVTGLQSSIQGGAIGYMFGSISAIDPTQNGTAPKP-ANP 260
           F+++   + +WL  Q + V+  V      +QG  IG + G++S   P Q G  P+  A+ 
Sbjct: 34  FKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTLSPEMP-QAGIDPQAMASL 92

Query: 261 ALDSMMKAGPWGTARNLAAPDG------CASRRYPGDQE 359
                +  GP   ARN AA  G      C  +R  G ++
Sbjct: 93  KQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGKED 131

>gb|AAF23950.1| NTR [Herpesvirus papio]
          Length = 608

 Score = 40.4 bits (93), Expect(2) = 3e-05
 Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 497 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 550

Query: 762 TAAAATPAASHG-------GGRRRRVRAVDAARTSRGAAP 860
           +A    P    G       GG      A       RG+ P
Sbjct: 551 SAQRGHPPPGAGQRPSGPTGGHPAAPGAPGPPNPERGSGP 590

 Score = 39.7 bits (91), Expect = 0.066
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 87  PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 140

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 141 SAQRGHPPP--GAGQR 154

 Score = 39.7 bits (91), Expect(2) = 4e-05
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 333 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 386

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 387 SAQRGHPPP--GAGQR 400

 Score = 39.7 bits (91), Expect = 0.066
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 415 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 468

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 469 SAQRGHPPP--GAGQR 482

 Score = 39.7 bits (91), Expect = 0.066
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 210 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 263

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 264 SAQRGHPPP--GAGQR 277

 Score = 39.7 bits (91), Expect = 0.066
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 374 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 427

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 428 SAQRGHPPP--GAGQR 441

 Score = 39.7 bits (91), Expect = 0.066
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 128 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 181

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 182 SAQRGHPPP--GAGQR 195

 Score = 39.7 bits (91), Expect(2) = 4e-06
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 169 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 222

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 223 SAQRGHPPP--GAGQR 236

 Score = 39.7 bits (91), Expect(2) = 4e-05
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 456 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 509

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 510 SAQRGHPPP--GAGQR 523

 Score = 39.7 bits (91), Expect(2) = 4e-05
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 251 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 304

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 305 SAQRGHPPP--GAGQR 318

 Score = 39.7 bits (91), Expect(2) = 4e-05
 Identities = 26/76 (34%), Positives = 32/76 (41%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG       R + R  
Sbjct: 292 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPRTERRRG 345

Query: 762 TAAAATPAASHGGGRR 809
           +A    P    G G+R
Sbjct: 346 SAQRGHPPP--GAGQR 359

 Score = 38.5 bits (88), Expect = 0.15
 Identities = 24/66 (36%), Positives = 28/66 (42%)
 Frame = +3

Query: 582 PGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLRAQTRAA 761
           PGP   R + + GSA R H        PG G  P+ P   HPA PG    P     +  A
Sbjct: 538 PGPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPPNPERGSGPA 591

Query: 762 TAAAAT 779
              AAT
Sbjct: 592 DPPAAT 597

 Score = 37.7 bits (86), Expect = 0.25
 Identities = 28/82 (34%), Positives = 34/82 (41%)
 Frame = +3

Query: 564 QVHAQDPGPDEIRGQPQEGSADRQHHHAVERHRPGRGAHPARPPAAHPAPPGHLPQPQLR 743
           QVH    GP   R + + GSA R H        PG G  P+ P   HPA PG       R
Sbjct: 44  QVH----GPRSPRTERRRGSAQRGHPP------PGAGQRPSGPTGGHPAAPGAPGPRSPR 93

Query: 744 AQTRAATAAAATPAASHGGGRR 809
            + R  +A    P    G G+R
Sbjct: 94  TERRRGSAQRGHPPP--GAGQR 113

 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 39/133 (29%), Positives = 50/133 (37%), Gaps = 2/133 (1%)
 Frame = +2

Query: 95  GQEVARLAGHSGCSGSGPCYRPAVVDSGWRHRLYVWQHQRHRPHSEWHCAQAGEP--SSG 268
           G+E  R AG +     GPC  P+   +   H     + +R R       AQ G P   +G
Sbjct: 20  GREAGREAGRTW----GPCPAPSPPPAFQVHGPRSPRTERRRGS-----AQRGHPPPGAG 70

Query: 269 QHDEGRAVGHRAQSGGP*RVCKPPLPWRSRRRATARRMCTARWPPRFCRVWPTRS*AARP 448
           Q   G   GH A  G P     P  P   RRR +A+R      PP      P+      P
Sbjct: 71  QRPSGPTGGHPAAPGAP----GPRSPRTERRRGSAQR----GHPPPGAGQRPSGPTGGHP 122

Query: 449 TRSRALSPPVPRS 487
               A  P  PR+
Sbjct: 123 AAPGAPGPRSPRT 135

 Score = 30.0 bits (66), Expect(2) = 4e-05
 Identities = 27/84 (32%), Positives = 32/84 (37%), Gaps = 2/84 (2%)
 Frame = +2

Query: 242 AQAGEP--SSGQHDEGRAVGHRAQSGGP*RVCKPPLPWRSRRRATARRMCTARWPPRFCR 415
           AQ G P   +GQ   G   GH A  G P     P  P   RRR +A+R      PP    
Sbjct: 265 AQRGHPPPGAGQRPSGPTGGHPAAPGAP----GPRSPRTERRRGSAQR----GHPPPGAG 316

Query: 416 VWPTRS*AARPTRSRALSPPVPRS 487
             P+      P    A  P  PR+
Sbjct: 317 QRPSGPTGGHPAAPGAPGPRSPRT 340

 Score = 30.0 bits (66), Expect(2) = 4e-05
 Identities = 27/84 (32%), Positives = 32/84 (37%), Gaps = 2/84 (2%)
 Frame = +2

Query: 242 AQAGEP--SSGQHDEGRAVGHRAQSGGP*RVCKPPLPWRSRRRATARRMCTARWPPRFCR 415
           AQ G P   +GQ   G   GH A  G P     P  P   RRR +A+R      PP    
Sbjct: 142 AQRGHPPPGAGQRPSGPTGGHPAAPGAP----GPRSPRTERRRGSAQR----GHPPPGAG 193

Query: 416 VWPTRS*AARPTRSRALSPPVPRS 487
             P+      P    A  P  PR+
Sbjct: 194 QRPSGPTGGHPAAPGAPGPRSPRT 217

 Score = 30.0 bits (66), Expect(2) = 3e-05
 Identities = 27/84 (32%), Positives = 32/84 (37%), Gaps = 2/84 (2%)
 Frame = +2

Query: 242 AQAGEP--SSGQHDEGRAVGHRAQSGGP*RVCKPPLPWRSRRRATARRMCTARWPPRFCR 415
           AQ G P   +GQ   G   GH A  G P     P  P   RRR +A+R      PP    
Sbjct: 429 AQRGHPPPGAGQRPSGPTGGHPAAPGAP----GPRSPRTERRRGSAQR----GHPPPGAG 480

Query: 416 VWPTRS*AARPTRSRALSPPVPRS 487
             P+      P    A  P  PR+
Sbjct: 481 QRPSGPTGGHPAAPGAPGPRSPRT 504

 Score = 30.0 bits (66), Expect(2) = 4e-05
 Identities = 27/84 (32%), Positives = 32/84 (37%), Gaps = 2/84 (2%)
 Frame = +2

Query: 242 AQAGEP--SSGQHDEGRAVGHRAQSGGP*RVCKPPLPWRSRRRATARRMCTARWPPRFCR 415
           AQ G P   +GQ   G   GH A  G P     P  P   RRR +A+R      PP    
Sbjct: 183 AQRGHPPPGAGQRPSGPTGGHPAAPGAP----GPRSPRTERRRGSAQR----GHPPPGAG 234

Query: 416 VWPTRS*AARPTRSRALSPPVPRS 487
             P+      P    A  P  PR+
Sbjct: 235 QRPSGPTGGHPAAPGAPGPRSPRT 258

 Score = 30.0 bits (66), Expect(2) = 4e-05
 Identities = 27/84 (32%), Positives = 32/84 (37%), Gaps = 2/84 (2%)
 Frame = +2

Query: 242 AQAGEP--SSGQHDEGRAVGHRAQSGGP*RVCKPPLPWRSRRRATARRMCTARWPPRFCR 415
           AQ G P   +GQ   G   GH A  G P     P  P   RRR +A+R      PP    
Sbjct: 347 AQRGHPPPGAGQRPSGPTGGHPAAPGAP----GPRSPRTERRRGSAQR----GHPPPGAG 398

Query: 416 VWPTRS*AARPTRSRALSPPVPRS 487
             P+      P    A  P  PR+
Sbjct: 399 QRPSGPTGGHPAAPGAPGPRSPRT 422



EST assemble image


clone accession position
1 HC077c05_r AV637768 1 574
2 HCL042a12_r AV641896 10 548
3 HC022b04_r AV633548 10 501
4 CM092h06_r AV392711 10 469
5 MX231a02_r BP090918 82 366
6 CM013h08_r AV387085 192 787
7 HC065c08_r AV636863 298 792
8 CM091c06_r AV397572 594 891




Chlamydomonas reinhardtii
Kazusa DNA Research Institute