KCC001052A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001052A_C01 KCC001052A_c01
ggagcacattgagcaggccggcatccactcgggcgactcggcgtgcagcctgcccacgca
gtccatcaaggccgaggtgcTCAAGACCATCCGCGAGTGGACTGTGGCAGTGGCCAAGGA
GCTCAAGGTGGTGGGCCTCATCAACATCCAGTTCGCGGTGCAGGACGACGTGCCCTACAT
CATCGAGGCCAACCCCCGCGCCTCGCGCACGGTGCCGTTTGTGGCCAAGGCCGTGGGCCA
CCCCATCGCCAAGTACGCCTCGCTGCTCATGAGCGGCAAGACGCTGGCTGAGATTGGGTT
CACGGAGGAGCCCATCCCGCCGCACGTGGCTGTCAAGGAGGTGGTGCTGCCCTTCAACAA
GTTCCCCGGCGCCGACACGCTGCTGGGCCCCGAGATGCGCTCCACCGGAGAGGTGATGGG
CATTGACAAGGACTTTGCGGCGGCGTTCGCCAAGGCGCAGATCGCCGCGGGCCAGAAGCT
GCCCAAGACCGGCAAGGTGTTTGTGTCCATGGCCGACAAGTACAAGCCCGACATCATCGA
GATTGCGCGCAACCTGGGCAACCTGGGCTTCGGCCTGGTGGCCACAACCGGCACCGCGCT
GGCGCTGCGCAACGCGGGCGTGCCGTGCGAGCAGGTGTTCAAGATCCAGGAGGGCCGTCC
CAACCCCGCCGACCTCATGCGCAACGGCGA
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001052A_C01 KCC001052A_c01
(690 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB90007.1| putative carbamoyl phosphate synthetase [Oryza s... 292 3e-78
ref|ZP_00070947.1| COG0458: Carbamoylphosphate synthase large su... 288 5e-77
ref|NP_683122.1| carbamoyl-phosphate synthase pyrimidine-specifi... 288 7e-77
sp|Q55756|CARB_SYNY3 Carbamoyl-phosphate synthase large chain (C... 287 9e-77
ref|NP_442333.1| carbamoyl-phosphate synthase, pyrimidine-specif... 287 9e-77
>dbj|BAB90007.1| putative carbamoyl phosphate synthetase [Oryza sativa (japonica
cultivar-group)]
Length = 1092
Score = 292 bits (748), Expect = 3e-78
Identities = 144/230 (62%), Positives = 177/230 (76%), Gaps = 1/230 (0%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKVVGLINIQFAVQDDVP-Y 178
EHIEQAGIHSGDSACSLPT+++ A+ L IR WT +AK L V GL+N Q+A+ +
Sbjct: 783 EHIEQAGIHSGDSACSLPTRTVSAKCLDIIRSWTTKLAKRLNVCGLMNCQYAITTSGEVF 842
Query: 179 IIEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEIGFTEEPIPPHVAVKEVVLPFN 358
++EANPRASRTVPFV+KA+GHP+AKYASL+MSG TL E+G+T+E +P HV+VKE VLPF
Sbjct: 843 LLEANPRASRTVPFVSKAIGHPLAKYASLVMSGVTLPELGYTQEVVPKHVSVKEAVLPFE 902
Query: 359 KFPGADTLLGPEMRSTGEVMGIDKDFAAAFAKAQIAAGQKLPKTGKVFVSMADKYKPDII 538
KF G D LLGPEMRSTGEVMGID +F+ AFAKAQIAAGQKLP G VF+S+ D K +
Sbjct: 903 KFQGCDILLGPEMRSTGEVMGIDYEFSGAFAKAQIAAGQKLPLNGTVFLSLNDLTKRHLA 962
Query: 539 EIARNLGNLGFGLVATTGTALALRNAGVPCEQVFKIQEGRPNPADLMRNG 688
EI R LGF ++AT+GTA L+ G+P E V KI EGRPN D+++NG
Sbjct: 963 EIGRGFRELGFNIIATSGTAKVLQLEGIPVEPVLKIHEGRPNARDMLKNG 1012
Score = 97.8 bits (242), Expect = 1e-19
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 11/163 (6%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKV-VGLINIQFAVQ--DDV 172
E+I+ G+H+GDS P Q++ + + +R+++VA+ +E+ V G N+QFAV D
Sbjct: 226 ENIDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSVAIIREIGVECGGSNVQFAVNPADGE 285
Query: 173 PYIIEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEI--------GFTEEPIPPHV 328
+IE NPR SR+ +KA G PIAK A+ L G TL +I + EP +V
Sbjct: 286 VMVIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYTLDQIPNDITKKTPASFEPSIDYV 345
Query: 329 AVKEVVLPFNKFPGADTLLGPEMRSTGEVMGIDKDFAAAFAKA 457
K F KFPG++ +L +M+S GE M + + F +F KA
Sbjct: 346 VTKIPRFAFEKFPGSEPVLTTQMKSVGEAMALGRTFQESFQKA 388
>ref|ZP_00070947.1| COG0458: Carbamoylphosphate synthase large subunit (split gene in MJ)
[Trichodesmium erythraeum IMS101]
Length = 1076
Score = 288 bits (737), Expect = 5e-77
Identities = 142/229 (62%), Positives = 179/229 (78%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKVVGLINIQFAVQDDVPYI 181
EHIE+AGIHSGDSACS+P Q++ + ++TIR+WTVA+AK L V+GL+NIQFAVQ + YI
Sbjct: 785 EHIEEAGIHSGDSACSIPYQTLTSAAVETIRQWTVALAKALNVIGLMNIQFAVQGETVYI 844
Query: 182 IEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEIGFTEEPIPPHVAVKEVVLPFNK 361
+EANPRASRTVPFV+KA+G P+AK AS +MSGK L E+GF +E IP HV+VKE VLPF K
Sbjct: 845 LEANPRASRTVPFVSKAIGIPLAKIASRVMSGKNLEELGFIDEQIPDHVSVKEAVLPFAK 904
Query: 362 FPGADTLLGPEMRSTGEVMGIDKDFAAAFAKAQIAAGQKLPKTGKVFVSMADKYKPDIIE 541
FPG DT+LGPEMRSTGE MGID DF AFAKAQ++AGQKLP G VFVSM+D+YK ++
Sbjct: 905 FPGIDTVLGPEMRSTGEAMGIDVDFGKAFAKAQLSAGQKLPLEGTVFVSMSDRYKEAVVP 964
Query: 542 IARNLGNLGFGLVATTGTALALRNAGVPCEQVFKIQEGRPNPADLMRNG 688
+ ++L +LG +VAT GT LR + + K+ EGRPN D ++NG
Sbjct: 965 VVKDLVDLGLKVVATEGTRKILRLHDLEVGLMLKLHEGRPNVLDGIKNG 1013
Score = 94.7 bits (234), Expect = 1e-18
Identities = 63/164 (38%), Positives = 89/164 (53%), Gaps = 12/164 (7%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKV-VGLINIQFAVQD---D 169
E+I+ GIH+GDS P Q++ + + +R+ ++ + +E+ V G NIQFAV D
Sbjct: 236 ENIDPMGIHTGDSVTVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVHPLNGD 295
Query: 170 VPYIIEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEI--------GFTEEPIPPH 325
V +IE NPR SR+ +KA G PIAK A+ L G TL EI + EP +
Sbjct: 296 V-IVIEMNPRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIPNDITKKTPASFEPTIDY 354
Query: 326 VAVKEVVLPFNKFPGADTLLGPEMRSTGEVMGIDKDFAAAFAKA 457
V K F KFPG+ +L +M+S GE M I + F +F KA
Sbjct: 355 VVTKIPRFAFEKFPGSQPVLTTQMKSVGEAMAIGRTFQESFQKA 398
>ref|NP_683122.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
[Thermosynechococcus elongatus BP-1]
gi|22296060|dbj|BAC09884.1| carbamoyl-phosphate synthase
pyrimidine-specific large chain [Thermosynechococcus
elongatus BP-1]
Length = 1100
Score = 288 bits (736), Expect = 7e-77
Identities = 146/230 (63%), Positives = 179/230 (77%), Gaps = 1/230 (0%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKVVGLINIQFAVQDDVPYI 181
EHIEQAGIHSGDSACSLPTQS+ VL+TIR W++A+A+ LKVVGL+N+Q AVQ D YI
Sbjct: 804 EHIEQAGIHSGDSACSLPTQSLSPAVLQTIRTWSIALAQALKVVGLMNLQLAVQGDQVYI 863
Query: 182 IEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEIGFTEEPIPPHVAVKEVVLPFNK 361
+EANPRASRTVPFV+KA+G P+AK A+ LMSGKTLAE+ F E IP HVAVKE VLPF K
Sbjct: 864 LEANPRASRTVPFVSKAIGIPLAKVAARLMSGKTLAELNFLNEKIPNHVAVKEAVLPFEK 923
Query: 362 FPGADTLLGPEMRSTGEVMGIDKDFAAAFAKAQIAAGQKLPKTGKVFVSMADKYKPDIIE 541
F G DT+LGPEMRSTGE MGID F AA+AK+Q+AA Q+LP G VFVSM+D+ K I+
Sbjct: 924 FAGTDTVLGPEMRSTGEAMGIDMTFGAAYAKSQLAANQRLPLKGTVFVSMSDRDKAAIVP 983
Query: 542 IARNLGNLGFGLVATTGTALALRNAGVP-CEQVFKIQEGRPNPADLMRNG 688
+ + L +LGF ++AT GT AL AG+ E + K+ EGRP+ D ++NG
Sbjct: 984 VVQELQSLGFRMIATEGTRNALLEAGLSNIELILKLHEGRPHVLDAIKNG 1033
Score = 93.2 bits (230), Expect = 3e-18
Identities = 61/163 (37%), Positives = 87/163 (52%), Gaps = 11/163 (6%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKV-VGLINIQFAVQDDVP- 175
E+I+ GIH+GDS P Q++ + + +R+ + + +E+ V G NIQFAV +
Sbjct: 236 ENIDPMGIHTGDSITVAPAQTLTDKEYQRLRDAAIKIIREIGVETGGSNIQFAVNPETGE 295
Query: 176 -YIIEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEI--GFTE------EPIPPHV 328
+IE NPR SR+ +KA G PIAK A+ L G TL EI T+ EP +V
Sbjct: 296 VIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLPEIPNDITQKTPASFEPTIDYV 355
Query: 329 AVKEVVLPFNKFPGADTLLGPEMRSTGEVMGIDKDFAAAFAKA 457
K F KFPG+ +L +M+S GE M I + F + KA
Sbjct: 356 VTKIPRFAFEKFPGSPPVLTTQMKSVGEAMAIGRTFQESLQKA 398
>sp|Q55756|CARB_SYNY3 Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
synthetase ammonia chain)
Length = 1081
Score = 287 bits (735), Expect = 9e-77
Identities = 148/230 (64%), Positives = 177/230 (76%), Gaps = 1/230 (0%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKVVGLINIQFAVQDDVPYI 181
EHIE+AGIHSGDSACS+P S+ VL TIR+WT +A+ L VVGL+NIQ+AVQ D YI
Sbjct: 788 EHIEEAGIHSGDSACSIPYTSLSDNVLTTIRQWTEQLARALNVVGLMNIQYAVQGDQVYI 847
Query: 182 IEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEIGFTEEPIPPHVAVKEVVLPFNK 361
+EANPRASRTVP+V+KA G P+AK ASL+MSGKTL E+G TEE IP HVAVKE VLPF+K
Sbjct: 848 LEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGVTEEFIPQHVAVKEAVLPFSK 907
Query: 362 FPGADTLLGPEMRSTGEVMGIDKDFAAAFAKAQIAAGQKLPKTGKVFVSMADKYKPDIIE 541
FPGADTLLGPEMRSTGEVMGID DF AFAKA++ AG L TG VFVSM+D+ K +
Sbjct: 908 FPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAELGAGVILATTGTVFVSMSDRTKEAAVP 967
Query: 542 IARNLGNLGFGLVATTGTALALRNAGVP-CEQVFKIQEGRPNPADLMRNG 688
+ R L +LGF +VAT+GT LR G+ E V K+ EGRP+ D ++NG
Sbjct: 968 VVRELIDLGFKVVATSGTQKVLREHGIEGVEVVLKLHEGRPHVIDWIKNG 1017
Score = 100 bits (249), Expect = 2e-20
Identities = 62/164 (37%), Positives = 92/164 (55%), Gaps = 12/164 (7%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKV-VGLINIQFAVQD---D 169
E+ + G+H+GDS P Q++ + + +R++++A+ +E+ V G NIQF+V D
Sbjct: 236 ENFDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVETGGSNIQFSVNPANGD 295
Query: 170 VPYIIEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEIG--------FTEEPIPPH 325
V +IE NPR SR+ +KA G PIAK+A+ L G TL EI + EP +
Sbjct: 296 V-IVIEMNPRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITKKTPASFEPTIDY 354
Query: 326 VAVKEVVLPFNKFPGADTLLGPEMRSTGEVMGIDKDFAAAFAKA 457
V K F KFPGA+ +L +M+S GE M I + F +F KA
Sbjct: 355 VVTKIPRFAFEKFPGAEPILNTQMKSVGEAMAIGRTFQESFQKA 398
>ref|NP_442333.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
[Synechocystis sp. PCC 6803] gi|7438086|pir||S76557
carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC
6.3.5.5) large chain [similarity] - Synechocystis sp.
(strain PCC 6803) gi|1001668|dbj|BAA10403.1|
carbamoyl-phosphate synthase, pyrimidine-specific, large
chain [Synechocystis sp. PCC 6803]
Length = 1105
Score = 287 bits (735), Expect = 9e-77
Identities = 148/230 (64%), Positives = 177/230 (76%), Gaps = 1/230 (0%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKVVGLINIQFAVQDDVPYI 181
EHIE+AGIHSGDSACS+P S+ VL TIR+WT +A+ L VVGL+NIQ+AVQ D YI
Sbjct: 812 EHIEEAGIHSGDSACSIPYTSLSDNVLTTIRQWTEQLARALNVVGLMNIQYAVQGDQVYI 871
Query: 182 IEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEIGFTEEPIPPHVAVKEVVLPFNK 361
+EANPRASRTVP+V+KA G P+AK ASL+MSGKTL E+G TEE IP HVAVKE VLPF+K
Sbjct: 872 LEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGVTEEFIPQHVAVKEAVLPFSK 931
Query: 362 FPGADTLLGPEMRSTGEVMGIDKDFAAAFAKAQIAAGQKLPKTGKVFVSMADKYKPDIIE 541
FPGADTLLGPEMRSTGEVMGID DF AFAKA++ AG L TG VFVSM+D+ K +
Sbjct: 932 FPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAELGAGVILATTGTVFVSMSDRTKEAAVP 991
Query: 542 IARNLGNLGFGLVATTGTALALRNAGVP-CEQVFKIQEGRPNPADLMRNG 688
+ R L +LGF +VAT+GT LR G+ E V K+ EGRP+ D ++NG
Sbjct: 992 VVRELIDLGFKVVATSGTQKVLREHGIEGVEVVLKLHEGRPHVIDWIKNG 1041
Score = 100 bits (249), Expect = 2e-20
Identities = 62/164 (37%), Positives = 92/164 (55%), Gaps = 12/164 (7%)
Frame = +2
Query: 2 EHIEQAGIHSGDSACSLPTQSIKAEVLKTIREWTVAVAKELKV-VGLINIQFAVQD---D 169
E+ + G+H+GDS P Q++ + + +R++++A+ +E+ V G NIQF+V D
Sbjct: 260 ENFDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVETGGSNIQFSVNPANGD 319
Query: 170 VPYIIEANPRASRTVPFVAKAVGHPIAKYASLLMSGKTLAEIG--------FTEEPIPPH 325
V +IE NPR SR+ +KA G PIAK+A+ L G TL EI + EP +
Sbjct: 320 V-IVIEMNPRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITKKTPASFEPTIDY 378
Query: 326 VAVKEVVLPFNKFPGADTLLGPEMRSTGEVMGIDKDFAAAFAKA 457
V K F KFPGA+ +L +M+S GE M I + F +F KA
Sbjct: 379 VVTKIPRFAFEKFPGAEPILNTQMKSVGEAMAIGRTFQESFQKA 422
EST assemble image
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clone |
accession |
position |
| 1 |
MXL005g01_r |
BP093254 |
1 |
439 |
| 2 |
HC096a10_r |
AV639186 |
151 |
542 |
| 3 |
CM012h09_r |
AV387156 |
163 |
690 |
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Chlamydomonas reinhardtii
Kazusa DNA Research Institute