KCC001048A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001048A_C01 KCC001048A_c01
ctgtatacatagcagtgcaattgaagccaggtgcagccgagtttgcacattggtgctgag
ggttctgacactgcgcaacgTCCGCGCAAGTCGCGGGTTTACGCGAGCGAGCCTGACGGG
GCCCAGATCAACCTTGGTTAGAGTCGTGTCAGTCCTTTATATTTAGTCATACACCGGCCC
TGAGTTTGGCCTGTACAAGGAAGCAAACAACATCATGTTGGGCCAGCTCTTTAACAAGGA
GACGCAGGCGATTTTCTTCAACTACAAGGAGAAGCCTGTGCAGCGCATGCTTGATTTTGA
CTTCGTTTGCGGGCGCGAGACTCCATCTGTCGCTGCTCTGGTGACACCCGGCAGCTCGGG
CGGCTTCCAGAAGCTGTTCTTCGGCAAGAACGAGATAGCCATCCCTGTGTACGGCAGCAT
CGCCGAGGCCACCCGCAAGCACCCCAAGGCGGATGTGTTCATCAACTACGCCTCCTTCCG
CAGCGCCTACGAGAGCTCGCTGCAGGCGCTCAACAGCGCCACCCTGCGTGTGATCGCCAT
CATCGCGGAGGGTGTCCCCGAGAAGGACACCAAGCACCTCATCGCGGTGGCCCGCGCCAA
CAACAAGGTCATCATCGGGCCCGCCACCGTGGGCGGCGTGCAGGCCGGCGCCTTCAAGAT
CGGCGACACGGCCGGCACGCTGGACAACATCGTGGCCTGCAAGCTGCACCGCCCCGGCTC
CGTGGGCTTCGTGTCCAAGTCCGGCGGCATGAGTAACGAGATGTACAACGTGCTGGCACG
TGCCACCGACGGCCTGTACGAGGGCATCGCCATCGGCGGCGACGCCTTCCCCGGCTCCAC
TCTGTCCGATCACTGCCTGCGATACGAGCACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001048A_C01 KCC001048A_c01
         (872 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus]           338  7e-92
ref|NP_187317.1| ATP citrate lyase -related [Arabidopsis thalian...   338  7e-92
dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japoni...   338  9e-92
ref|NP_199757.1| ATP citrate lyase [Arabidopsis thaliana] gi|975...   337  2e-91
emb|CAB46076.1| ATP citrate lyase [Cyanophora paradoxa]               329  3e-89

>emb|CAC86995.1| ATP citrate lyase a-subunit [Lupinus albus]
          Length = 608

 Score =  338 bits (867), Expect = 7e-92
 Identities = 162/217 (74%), Positives = 190/217 (86%)
 Frame = +2

Query: 221 GQLFNKETQAIFFNYKEKPVQRMLDFDFVCGRETPSVAALVTPGSSGGFQKLFFGKNEIA 400
           GQLF++ TQA+F+NYK+ PVQRMLDFDF+CGRETPSVA ++ PGS G FQKLFFG+ EIA
Sbjct: 4   GQLFSRTTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINPGSEG-FQKLFFGQEEIA 62

Query: 401 IPVYGSIAEATRKHPKADVFINYASFRSAYESSLQALNSATLRVIAIIAEGVPEKDTKHL 580
           IPV+ +I  A  +HP ADVFIN+ASFRSA  SS+ AL  +T+RV+AIIAEGVPE DTK L
Sbjct: 63  IPVHATIEAACARHPTADVFINFASFRSAAASSMAALKQSTIRVVAIIAEGVPESDTKQL 122

Query: 581 IAVARANNKVIIGPATVGGVQAGAFKIGDTAGTLDNIVACKLHRPGSVGFVSKSGGMSNE 760
           IA AR+NNKV+IGPATVGG+QAGAFKIGDTAGT+DNI+ CKL+RPGSVGFVSKSGGMSNE
Sbjct: 123 IAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNE 182

Query: 761 MYNVLARATDGLYEGIAIGGDAFPGSTLSDHCLRYEH 871
           +YN +AR TDG+YEGIAIGGD FPGSTLSDH LR+ +
Sbjct: 183 LYNTIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNN 219

>ref|NP_187317.1| ATP citrate lyase -related [Arabidopsis thaliana]
           gi|12321918|gb|AAG50997.1|AC036106_10 ATP citrate lyase,
           putative; 38389-41775 [Arabidopsis thaliana]
           gi|12322674|gb|AAG51326.1|AC020580_6 ATP citrate lyase,
           putative; 3734-7120 [Arabidopsis thaliana]
           gi|27754223|gb|AAO22565.1| putative ATP citrate lyase
           [Arabidopsis thaliana]
          Length = 608

 Score =  338 bits (867), Expect = 7e-92
 Identities = 164/217 (75%), Positives = 188/217 (86%)
 Frame = +2

Query: 221 GQLFNKETQAIFFNYKEKPVQRMLDFDFVCGRETPSVAALVTPGSSGGFQKLFFGKNEIA 400
           GQLF++ TQA+F+NYK+ P+QRMLDFDF+CGRETPSVA ++ PGS G FQKLFFG+ EIA
Sbjct: 4   GQLFSRNTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEG-FQKLFFGQEEIA 62

Query: 401 IPVYGSIAEATRKHPKADVFINYASFRSAYESSLQALNSATLRVIAIIAEGVPEKDTKHL 580
           IPV+ +I  A   HP ADVFIN+ASFRSA  SS+ AL   T++V+AIIAEGVPE DTK L
Sbjct: 63  IPVHAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTKQL 122

Query: 581 IAVARANNKVIIGPATVGGVQAGAFKIGDTAGTLDNIVACKLHRPGSVGFVSKSGGMSNE 760
           IA ARANNKVIIGPATVGGVQAGAFKIGDTAGT+DNI+ CKL+RPGSVGFVSKSGGMSNE
Sbjct: 123 IAYARANNKVIIGPATVGGVQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNE 182

Query: 761 MYNVLARATDGLYEGIAIGGDAFPGSTLSDHCLRYEH 871
           MYN +AR TDG+YEGIAIGGD FPGSTLSDH LR+ +
Sbjct: 183 MYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNN 219

>dbj|BAB60936.1| putative ATP citrate lyase [Oryza sativa (japonica cultivar-group)]
           gi|15623805|dbj|BAB67865.1| putative ATP citrate lyase
           [Oryza sativa (japonica cultivar-group)]
          Length = 608

 Score =  338 bits (866), Expect = 9e-92
 Identities = 163/217 (75%), Positives = 188/217 (86%)
 Frame = +2

Query: 221 GQLFNKETQAIFFNYKEKPVQRMLDFDFVCGRETPSVAALVTPGSSGGFQKLFFGKNEIA 400
           GQ+F+K TQA+F+NYK+ P+QRMLDFDF+CGRETPSVA ++ PGS G FQKLFFG+ EIA
Sbjct: 4   GQIFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSDG-FQKLFFGQEEIA 62

Query: 401 IPVYGSIAEATRKHPKADVFINYASFRSAYESSLQALNSATLRVIAIIAEGVPEKDTKHL 580
           IPV+ +I  A   HP ADVFIN+ASFRSA  SS+ AL   T+RV+AIIAEGVPE DTK L
Sbjct: 63  IPVHPTIEAACNAHPTADVFINFASFRSAAASSMSALKQPTIRVVAIIAEGVPESDTKQL 122

Query: 581 IAVARANNKVIIGPATVGGVQAGAFKIGDTAGTLDNIVACKLHRPGSVGFVSKSGGMSNE 760
           I+ ARANNKVIIGPATVGG+QAGAFKIGDTAGT+DNI+ CKL+RPGSVGFVSKSGGMSNE
Sbjct: 123 ISYARANNKVIIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNE 182

Query: 761 MYNVLARATDGLYEGIAIGGDAFPGSTLSDHCLRYEH 871
           MYN +AR TDG+YEGIAIGGD FPGSTLSDH LR+ +
Sbjct: 183 MYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNN 219

>ref|NP_199757.1| ATP citrate lyase [Arabidopsis thaliana] gi|9759429|dbj|BAB09916.1|
           ATP citrate lyase [Arabidopsis thaliana]
           gi|14334788|gb|AAK59572.1| putative ATP citrate lyase
           [Arabidopsis thaliana] gi|16648644|gb|AAL25638.1|
           ATP-citrate lyase subunit B [Arabidopsis thaliana]
           gi|17065616|gb|AAL33788.1| putative ATP citrate lyase
           [Arabidopsis thaliana]
          Length = 608

 Score =  337 bits (864), Expect = 2e-91
 Identities = 163/217 (75%), Positives = 188/217 (86%)
 Frame = +2

Query: 221 GQLFNKETQAIFFNYKEKPVQRMLDFDFVCGRETPSVAALVTPGSSGGFQKLFFGKNEIA 400
           GQLF++ TQA+F+NYK+ PVQRMLDFDF+CGRETPSVA ++ PGS G FQKLFFG+ EIA
Sbjct: 4   GQLFSRTTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINPGSEG-FQKLFFGQEEIA 62

Query: 401 IPVYGSIAEATRKHPKADVFINYASFRSAYESSLQALNSATLRVIAIIAEGVPEKDTKHL 580
           IPV+ +I  A   HP ADVFIN+ASFRSA  SS+ AL   T++V+AIIAEGVPE DTK L
Sbjct: 63  IPVHAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTKQL 122

Query: 581 IAVARANNKVIIGPATVGGVQAGAFKIGDTAGTLDNIVACKLHRPGSVGFVSKSGGMSNE 760
           IA ARANNKV+IGPATVGG+QAGAFKIGDTAGT+DNI+ CKL+RPGSVGFVSKSGGMSNE
Sbjct: 123 IAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNE 182

Query: 761 MYNVLARATDGLYEGIAIGGDAFPGSTLSDHCLRYEH 871
           MYN +AR TDG+YEGIAIGGD FPGSTLSDH LR+ +
Sbjct: 183 MYNTVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNN 219

>emb|CAB46076.1| ATP citrate lyase [Cyanophora paradoxa]
          Length = 524

 Score =  329 bits (844), Expect = 3e-89
 Identities = 154/218 (70%), Positives = 186/218 (84%)
 Frame = +2

Query: 218 LGQLFNKETQAIFFNYKEKPVQRMLDFDFVCGRETPSVAALVTPGSSGGFQKLFFGKNEI 397
           + QLF++ TQA+ FNYK  PVQRMLDFDF+  RETPSVA L+  GS GGF+K+FFG  EI
Sbjct: 6   MAQLFSRSTQALIFNYKPNPVQRMLDFDFLARRETPSVAGLINVGSKGGFEKVFFGTKEI 65

Query: 398 AIPVYGSIAEATRKHPKADVFINYASFRSAYESSLQALNSATLRVIAIIAEGVPEKDTKH 577
           A+PVY S  +A R HP ADVFIN+ASFRSAY+SSL+AL   ++RV+ IIAEGVPE D K 
Sbjct: 66  AVPVYASTQDAVRAHPNADVFINFASFRSAYQSSLEALEIPSIRVVVIIAEGVPEGDVKK 125

Query: 578 LIAVARANNKVIIGPATVGGVQAGAFKIGDTAGTLDNIVACKLHRPGSVGFVSKSGGMSN 757
           LIAV++   K+IIGPATVGGVQAGAFKIGDTAGT+DNI++CKLHRPGSVGFVSKSGG+SN
Sbjct: 126 LIAVSKKKGKIIIGPATVGGVQAGAFKIGDTAGTVDNIISCKLHRPGSVGFVSKSGGLSN 185

Query: 758 EMYNVLARATDGLYEGIAIGGDAFPGSTLSDHCLRYEH 871
           E YN+L+R TDGL+EGIA+GGDAFPG+TL+DH +R++H
Sbjct: 186 ECYNILSRTTDGLFEGIAVGGDAFPGTTLADHVIRFQH 223



EST assemble image


clone accession position
1 LCL063f04_r AV629682 1 490
2 MXL014d11_r BP093833 122 388
3 CM012g09_r AV387155 271 765
4 LCL029a04_r AV627583 351 872




Chlamydomonas reinhardtii
Kazusa DNA Research Institute