KCC001042A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001042A_C01 KCC001042A_c01
cacgctctgcaCGCAAATACCTTCAGCATGCCTCTCAAGCTGCACTACTTCGCAGGCGCC
GGCCGCGCCGAGGTGTCGCGCCTGCTCTTCACCATTGGCAACGTGCCGTTTGAGGATGTC
ACTTACACATACGCCACCTTTGCCGAGTTCAAGGCCAAGACACCCTTTGGCCAAGTGCCT
GTTCTGGAGTTTGAGGATGGGAGCATGCTGGCACAGAGCGGCGCCATTGACCGCTATGTG
GCCAAGCTGACGGGTCTGTACCCGGAGGACCCCAAGGACGCCGCGTTTGCGGACATGGTG
GTCTTCCACGTGACCGACTTCATGGACTTGTTCATGCCCACCTGGACCATGCCCGCTGAG
GAGAAGGTGAAGGCGCGTCAGGACATCCTGGCCGGCAAGGGCGGCGACAAACTGAAGCAG
CTGGAGAAGATTATTGAGAAGGCCAATGCCGAGGGCGGCGGCTGGCTGGCGGGCGGCAAG
CTTTCTTTCGCCGACGTGGTGGTGTTCACCTACCTCAGCGGCATCACCAGCCCCATCATG
GAGGGCATTCCCAAGGACCTGCTAAACTCCTA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001042A_C01 KCC001042A_c01
         (572 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_497119.1| glutathione S-transferase family member (2P458)...    97  2e-19
ref|NP_497123.2| predicted CDS, glutathione S-Transferase (gst-3...    92  5e-18
ref|NP_497115.1| glutathione S-Transferase (gst-26) [Caenorhabdi...    92  7e-18
ref|NP_741061.2| glutathione S-Transferase (gst-35) [Caenorhabdi...    91  9e-18
ref|NP_741060.2| predicted CDS, glutathione S-Transferase (gst-3...    91  1e-17

>ref|NP_497119.1| glutathione S-transferase family member (2P458) [Caenorhabditis
           elegans] gi|6434557|emb|CAB61107.1| C. elegans GST-39
           protein (corresponding sequence Y53F4B.33)
           [Caenorhabditis elegans]
          Length = 209

 Score = 97.1 bits (240), Expect = 2e-19
 Identities = 68/172 (39%), Positives = 93/172 (53%), Gaps = 8/172 (4%)
 Frame = +1

Query: 28  MPL-KLHYFAGAGRAEVSRLLFTIGNVPFED--VTYTYATFAEFKAKTPFGQVPVLEFED 198
           MPL KL YF   G AE +R+LF +  VPFED  +T+   ++ + K KTPFGQVPVL   D
Sbjct: 1   MPLYKLTYFDARGYAEPARILFHLAGVPFEDNRLTHGDGSWEKIKDKTPFGQVPVLSV-D 59

Query: 199 GSMLAQSGAIDRYVAKLTGLYPEDPKDAAFADMVVFHVTDFMDLFMPTWT-----MPAEE 363
           G  + QS AI RY+A   G   + P++ A+AD +V    DFM  F           PAEE
Sbjct: 60  GFDIPQSAAIIRYLANKFGYAGKTPEEQAWADAIVDQFKDFMGAFRQLIMAQRSGKPAEE 119

Query: 364 KVKARQDILAGKGGDKLKQLEKIIEKANAEGGGWLAGGKLSFADVVVFTYLS 519
             K   ++         K L  ++EK+ +   G+L G  L+FAD+VV   L+
Sbjct: 120 IAKISSEVAIPARDSYFKILNGLLEKSKS---GFLVGDGLTFADIVVVENLT 168

>ref|NP_497123.2| predicted CDS, glutathione S-Transferase (gst-32) [Caenorhabditis
           elegans] gi|24817612|emb|CAB97240.2| C. elegans GST-32
           protein (corresponding sequence Y53F4B.37)
           [Caenorhabditis elegans]
          Length = 209

 Score = 92.0 bits (227), Expect = 5e-18
 Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
 Frame = +1

Query: 37  KLHYFAGAGRAEVSRLLFTIGNVPFEDVTYTYA--TFAEFKAKTPFGQVPVLEFEDGSML 210
           KL YF     AE +R+LF +  VPFED  +T    T+ + K KTPFGQVPVL   DG  +
Sbjct: 5   KLTYFNSRWFAEPARILFQLAGVPFEDFRFTRGNGTWEKLKDKTPFGQVPVLTV-DGFDI 63

Query: 211 AQSGAIDRYVAKLTGLYPEDPKDAAFADMVVFHVTDFMDLFMPTWT-----MPAEEKVKA 375
            QS AI RY+A   G   + P++ A+AD +   V DF+D F            AEE  K 
Sbjct: 64  PQSSAIIRYLANKFGYAGKTPEEQAWADAICDQVKDFIDSFKQIVIAKRDGKTAEEIEKI 123

Query: 376 RQDILAGKGGDKLKQLEKIIEKANAEGGGWLAGGKLSFADVVV 504
             +I         K +  I+EK+ +   G+L G  L+FAD+VV
Sbjct: 124 HTEIFLPAKDSYFKIINGILEKSKS---GFLVGDSLTFADIVV 163

>ref|NP_497115.1| glutathione S-Transferase (gst-26) [Caenorhabditis elegans]
           gi|6434553|emb|CAB61103.1| C. elegans GST-26 protein
           (corresponding sequence Y53F4B.29) [Caenorhabditis
           elegans]
          Length = 209

 Score = 91.7 bits (226), Expect = 7e-18
 Identities = 63/163 (38%), Positives = 85/163 (51%), Gaps = 7/163 (4%)
 Frame = +1

Query: 37  KLHYFAGAGRAEVSRLLFTIGNVPFEDVTYTYA--TFAEFKAKTPFGQVPVLEFEDGSML 210
           KL YF   G  E +R+LF + +VPFED   T+   T+ + K KTP GQVPVL   DG  +
Sbjct: 5   KLTYFNARGYGEAARILFHLADVPFEDFRMTHGDGTWEKLKEKTPLGQVPVLSV-DGFEI 63

Query: 211 AQSGAIDRYVAKLTGLYPEDPKDAAFADMVVFHVTDFMDLFMPTWT-----MPAEEKVKA 375
            QS AI RY+A   G   + P++ A+AD +V    DFM  F           PAEE  K 
Sbjct: 64  PQSAAIIRYLANKFGYAGKTPEEQAWADAIVDQFKDFMGSFREVGKAHAAGKPAEEIAKI 123

Query: 376 RQDILAGKGGDKLKQLEKIIEKANAEGGGWLAGGKLSFADVVV 504
            Q  +          +  I+EK+ +   G+L G  L+FAD+VV
Sbjct: 124 MQSDVVPARDAFFVIINGILEKSKS---GFLVGDGLTFADIVV 163

>ref|NP_741061.2| glutathione S-Transferase (gst-35) [Caenorhabditis elegans]
           gi|26251563|gb|AAM19064.2|AC119287_2 Hypothetical
           protein Y1H11.2 [Caenorhabditis elegans]
          Length = 218

 Score = 91.3 bits (225), Expect = 9e-18
 Identities = 59/174 (33%), Positives = 91/174 (51%), Gaps = 14/174 (8%)
 Frame = +1

Query: 37  KLHYFAGAGRAEVSRLLFTIGNVPFEDVTYTYAT---------FAEFKAKTPFGQVPVLE 189
           KL YF     AE +R+LF +G VPFED                F   K KTPFG+ P+LE
Sbjct: 5   KLTYFDIRAFAEPARMLFHLGGVPFEDARMPTDDIVPGIQSDQFLALKEKTPFGRFPILE 64

Query: 190 FEDGSMLAQSGAIDRYVAKLTGLYPEDPKDAAFADMVVFHVTDFMDLFMPTW-----TMP 354
           F DG  +AQS AI RY+A+  G   + P++ A+AD +V  + ++++ F P         P
Sbjct: 65  F-DGFKIAQSAAIQRYLARKFGFAGKTPEEEAYADSIVDQMKEYIESFRPVLYAQKSGKP 123

Query: 355 AEEKVKARQDILAGKGGDKLKQLEKIIEKANAEGGGWLAGGKLSFADVVVFTYL 516
            EE  K   D+      + +K L ++++   +   G+L G  L++AD+VV  ++
Sbjct: 124 EEEVKKIHDDVYIPAKNNLIKILNRLLKDNKS---GFLVGNGLTYADLVVADHM 174

>ref|NP_741060.2| predicted CDS, glutathione S-Transferase (gst-34) [Caenorhabditis
           elegans] gi|28275045|gb|AAO38568.1| Hypothetical protein
           Y1H11.1 [Caenorhabditis elegans]
          Length = 218

 Score = 90.9 bits (224), Expect = 1e-17
 Identities = 68/188 (36%), Positives = 98/188 (51%), Gaps = 14/188 (7%)
 Frame = +1

Query: 37  KLHYFAGAGRAEVSRLLFTIGNVPFEDVTYTYA---------TFAEFKAKTPFGQVPVLE 189
           KL YF     AE +RLLF +G VP+EDV               F   K KTPFG+ PVL 
Sbjct: 5   KLTYFDIRAFAEPARLLFHLGGVPYEDVRMPTDDIVPGIQSDAFLALKDKTPFGRFPVLS 64

Query: 190 FEDGSMLAQSGAIDRYVAKLTGLYPEDPKDAAFADMVVFHVTDFMDLFMPTW-----TMP 354
             DG  LAQS AI RY+A+  G   + P+D AFAD +V  V ++++ F P         P
Sbjct: 65  I-DGFDLAQSTAIHRYLARKFGYAGKSPEDEAFADSIVDQVKEYLESFRPLLYAQKSGKP 123

Query: 355 AEEKVKARQDILAGKGGDKLKQLEKIIEKANAEGGGWLAGGKLSFADVVVFTYLSGITSP 534
            EE  +   ++         K L +I++++ +E   +L G  L++AD+VV  +L  +T+ 
Sbjct: 124 EEEVKRIHDEVYIPVKNLLFKILTRILKESKSE---YLVGDGLTWADLVVADHLYSLTN- 179

Query: 535 IMEGIPKD 558
           I E  P+D
Sbjct: 180 IKELDPED 187



EST assemble image


clone accession position
1 MX210f12_r BP089616 1 286
2 MXL032a01_r BP094900 12 423
3 CM012e04_r AV387187 12 572




Chlamydomonas reinhardtii
Kazusa DNA Research Institute