Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001016A_C01 KCC001016A_c01
(583 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O81220|DCUP_MAIZE Uroporphyrinogen decarboxylase, chloroplast... 249 2e-65
pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Mode... 246 2e-64
sp|Q42855|DCUP_HORVU Uroporphyrinogen decarboxylase (URO-D) (UPD... 246 2e-64
sp|Q42967|DCUP_TOBAC Uroporphyrinogen decarboxylase, chloroplast... 246 2e-64
ref|NP_181581.1| uroporphyrinogen decarboxylase (UPD), putative ... 242 3e-63
>sp|O81220|DCUP_MAIZE Uroporphyrinogen decarboxylase, chloroplast precursor (URO-D) (UPD)
gi|7436552|pir||T01653 uroporphyrinogen decarboxylase
(EC 4.1.1.37) - maize gi|3420233|gb|AAC31883.1|
uroporphyrinogen decarboxylase [Zea mays]
Length = 393
Score = 249 bits (637), Expect = 2e-65
Identities = 120/193 (62%), Positives = 152/193 (78%)
Frame = +3
Query: 3 ATYIVEGGSSKNFAHIKKMAFSTPEILHALLDKLADNVADYVRYQADAGAQVVQIFDSWA 182
A+Y VEGGSSKNF IKKMAFS P ILH LL K ++A+Y++YQAD GAQ VQIFDSWA
Sbjct: 198 ASYCVEGGSSKNFTLIKKMAFSEPAILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWA 257
Query: 183 SELQPQDFDVFSGPYIKKVIDSVRKTHPDLPIILYISGSGGLLERMASCSPDIISLDQSV 362
+EL P DF+ FS PY+K+++DSVR+THPDLP+ILY SGSGGLLER+ D++SLD +V
Sbjct: 258 TELSPADFEEFSLPYLKQIVDSVRETHPDLPLILYASGSGGLLERLPLTGVDVVSLDWTV 317
Query: 363 DFTDGVKRCGTNFAFQGNMDPGVLFGSKDFIEKRVMDTIKAARDADVRHVMNLCHGVLPG 542
D +G KR G+N A QGN+DPGVLFGSK+FI +R+ DT++ A +V HV+NL HG+ G
Sbjct: 318 DMAEGRKRLGSNTAVQGNVDPGVLFGSKEFITRRIYDTVQKA--GNVGHVLNLGHGIKVG 375
Query: 543 TPEDHVGHYFHVA 581
TPE++V H+F VA
Sbjct: 376 TPEENVAHFFEVA 388
>pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
Uroporphyrinogen-Iii Decarboxylase From Nicotiana
Tabacum: Implications For The Catalytic Mechanism
Length = 353
Score = 246 bits (628), Expect = 2e-64
Identities = 114/193 (59%), Positives = 151/193 (78%)
Frame = +3
Query: 3 ATYIVEGGSSKNFAHIKKMAFSTPEILHALLDKLADNVADYVRYQADAGAQVVQIFDSWA 182
A+Y+VEGGSSKNF IK++AF+ P++LHALL K A ++A Y+RYQAD+GAQ VQIFDSWA
Sbjct: 158 ASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWA 217
Query: 183 SELQPQDFDVFSGPYIKKVIDSVRKTHPDLPIILYISGSGGLLERMASCSPDIISLDQSV 362
+EL P DF+ FS PY+K+++DSV+ THP+LP+ILY SGSGGLLER+ D++SLD +V
Sbjct: 218 TELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLERLPLTGVDVVSLDWTV 277
Query: 363 DFTDGVKRCGTNFAFQGNMDPGVLFGSKDFIEKRVMDTIKAARDADVRHVMNLCHGVLPG 542
D DG +R G N A QGN+DPGVLFGSK+FI R+ DT+K A +H++NL HG+ G
Sbjct: 278 DMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKG--KHILNLGHGIKVG 335
Query: 543 TPEDHVGHYFHVA 581
TPE++ H+F +A
Sbjct: 336 TPEENFAHFFEIA 348
>sp|Q42855|DCUP_HORVU Uroporphyrinogen decarboxylase (URO-D) (UPD) gi|1362169|pir||S55733
uroporphyrinogen decarboxylase - barley
gi|1016347|emb|CAA58039.1| uroporphyrinogen
decarboxylase [Hordeum vulgare subsp. vulgare]
Length = 330
Score = 246 bits (628), Expect = 2e-64
Identities = 117/193 (60%), Positives = 151/193 (77%)
Frame = +3
Query: 3 ATYIVEGGSSKNFAHIKKMAFSTPEILHALLDKLADNVADYVRYQADAGAQVVQIFDSWA 182
A+Y VEGGSSKNF+ IK+MAF+ P ILH LL K ++A+Y++YQAD GAQ VQIFDSWA
Sbjct: 135 ASYCVEGGSSKNFSKIKRMAFAEPAILHNLLQKFTTSMANYIKYQADNGAQAVQIFDSWA 194
Query: 183 SELQPQDFDVFSGPYIKKVIDSVRKTHPDLPIILYISGSGGLLERMASCSPDIISLDQSV 362
+EL P DF+ FS PY+K+++DSV++THPDLP+ILY SGSGGLLER+ D++SLD +V
Sbjct: 195 TELSPVDFEEFSLPYLKQIVDSVKETHPDLPLILYASGSGGLLERLPLTGVDVVSLDWTV 254
Query: 363 DFTDGVKRCGTNFAFQGNMDPGVLFGSKDFIEKRVMDTIKAARDADVRHVMNLCHGVLPG 542
D +G KR G+N A QGN+DPGVLFGSK+FI KR+ DT++ A HV+NL HG+ G
Sbjct: 255 DMAEGRKRLGSNIAVQGNVDPGVLFGSKEFITKRIYDTVQKA--GSQGHVLNLGHGIKVG 312
Query: 543 TPEDHVGHYFHVA 581
TPE++V H+F VA
Sbjct: 313 TPEENVAHFFEVA 325
>sp|Q42967|DCUP_TOBAC Uroporphyrinogen decarboxylase, chloroplast precursor (URO-D) (UPD)
gi|1362120|pir||S55732 uroporphyrinogen decarboxylase -
common tobacco gi|1009429|emb|CAA58040.1|
uroporphyrinogen decarboxylase [Nicotiana tabacum]
Length = 391
Score = 246 bits (628), Expect = 2e-64
Identities = 114/193 (59%), Positives = 151/193 (78%)
Frame = +3
Query: 3 ATYIVEGGSSKNFAHIKKMAFSTPEILHALLDKLADNVADYVRYQADAGAQVVQIFDSWA 182
A+Y+VEGGSSKNF IK++AF+ P++LHALL K A ++A Y+RYQAD+GAQ VQIFDSWA
Sbjct: 196 ASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWA 255
Query: 183 SELQPQDFDVFSGPYIKKVIDSVRKTHPDLPIILYISGSGGLLERMASCSPDIISLDQSV 362
+EL P DF+ FS PY+K+++DSV+ THP+LP+ILY SGSGGLLER+ D++SLD +V
Sbjct: 256 TELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLERLPLTGVDVVSLDWTV 315
Query: 363 DFTDGVKRCGTNFAFQGNMDPGVLFGSKDFIEKRVMDTIKAARDADVRHVMNLCHGVLPG 542
D DG +R G N A QGN+DPGVLFGSK+FI R+ DT+K A +H++NL HG+ G
Sbjct: 316 DMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKG--KHILNLGHGIKVG 373
Query: 543 TPEDHVGHYFHVA 581
TPE++ H+F +A
Sbjct: 374 TPEENFAHFFEIA 386
>ref|NP_181581.1| uroporphyrinogen decarboxylase (UPD), putative [Arabidopsis
thaliana] gi|6014937|sp|O22886|DCUP_ARATH
Uroporphyrinogen decarboxylase, chloroplast precursor
(URO-D) (UPD) gi|25291014|pir||B84830 probable
uroporphyrinogen decarboxylase [imported] - Arabidopsis
thaliana gi|2651307|gb|AAB87587.1| putative
uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|23297097|gb|AAN13092.1| putative uroporphyrinogen
decarboxylase [Arabidopsis thaliana]
Length = 394
Score = 242 bits (617), Expect = 3e-63
Identities = 112/194 (57%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Frame = +3
Query: 3 ATYIVEGGSSKNFAHIKKMAFSTPEILHALLDKLADNVADYVRYQADAGAQVVQIFDSWA 182
++Y++EGGSSKNF IK++AFS P++LHALL K ++ Y+RYQAD+GAQ VQIFDSWA
Sbjct: 199 SSYVIEGGSSKNFTQIKRLAFSQPKVLHALLQKFTTSMITYIRYQADSGAQAVQIFDSWA 258
Query: 183 SELQPQDFDVFSGPYIKKVIDSVRKTHPDLPIILYISGSGGLLERMASCSPDIISLDQSV 362
+EL P DF+ FS PY+K+++++V++THP+LP+ILY SGSGGLLER+A D++SLD +V
Sbjct: 259 TELSPVDFEEFSLPYLKQIVEAVKQTHPNLPLILYASGSGGLLERLARTGVDVVSLDWTV 318
Query: 363 DFTDGVKRCGTNFAFQGNMDPGVLFGSKDFIEKRVMDTI-KAARDADVRHVMNLCHGVLP 539
D +G R G + A QGN+DPGVLFGSK+FI R+ DT+ KA RD +H++NL HG+
Sbjct: 319 DMAEGRDRLGRDIAVQGNVDPGVLFGSKEFITSRIHDTVKKAGRD---KHILNLGHGIKV 375
Query: 540 GTPEDHVGHYFHVA 581
GTPE++V H+F VA
Sbjct: 376 GTPEENVAHFFEVA 389
