Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001013A_C01 KCC001013A_c01
(831 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL92198.1| similar to Cricetulus griseus (Chinese hamster). ... 67 4e-10
ref|ZP_00054198.1| COG2009: Succinate dehydrogenase/fumarate red... 58 2e-07
gb|AAM29561.1| RH04289p [Drosophila melanogaster] 57 5e-07
ref|NP_797222.1| succinate dehydrogenase, cytochrome b556 subuni... 57 5e-07
gb|AAL49350.1| RH44771p [Drosophila melanogaster] 56 6e-07
>gb|AAL92198.1| similar to Cricetulus griseus (Chinese hamster). Succinate
dehydrogenase cytochrome b560 subunit, mitochondrial
precursor (Integral membrane protein CII-3) (QPS1)
(QPs-1) [Dictyostelium discoideum]
Length = 192
Score = 67.0 bits (162), Expect = 4e-10
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Frame = +1
Query: 232 YTGGTDFLGTPKNHLDLIKKRPLSPDVMEIDN-------KSAH---YKFPLGALSSITNR 381
Y T+ TP ++ KK P + ID S H YKFPL A+ SI +R
Sbjct: 35 YLSQTNTTNTPLSYSTQAKK-PFTITEKRIDELKTPYQPTSPHLTIYKFPLPAVMSIMHR 93
Query: 382 VTGVALSVGFAG-AGV--FALRGSLDGVVAACAGSFLIGFPLKFLVSYAIIYHWLGGLRH 552
TG+ L++G G AGV FA ++ + + +P KF V+ + YH+ G+RH
Sbjct: 94 ATGICLALGITGLAGVTLFAPHDAIHYIQLLHTQYPALVYPAKFAVALPLTYHFCTGVRH 153
Query: 553 IVWDVSKIGNQADRTSLLELPKVEMSSKVLLGASAALALI 672
I+WD + G L + ++E S KVLL A L+ I
Sbjct: 154 IIWDETVKG--------LSISQIESSGKVLLAVVAVLSTI 185
>ref|ZP_00054198.1| COG2009: Succinate dehydrogenase/fumarate reductase, cytochrome b
subunit [Magnetospirillum magnetotacticum]
Length = 125
Score = 57.8 bits (138), Expect = 2e-07
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Frame = +1
Query: 286 KKRPLSPDVMEIDNKSAHYKFPLGALSSITNRVTGVALSVGFAGAGVFALRGSLDGVVAA 465
+ RPLSP V Y+ P A+ SI++R+TGVAL+VG + L + G VA
Sbjct: 4 RTRPLSPHVQV-------YRMPFTAILSISHRITGVALAVGTI-VLAYWLASAAYGPVAY 55
Query: 466 CAGSFLIGFPLKFLVSY----AIIYHWLGGLRHIVWDVSKIGNQADRTSLLELPKVEMSS 633
++G L LV + A+ YH G+RH+ WD + E+ + + S
Sbjct: 56 GHAQAVLGSVLGKLVLFGWTAALFYHLCNGIRHLFWDKGR---------GYEIAEADKSG 106
Query: 634 KVLLGASAALALIAAV 681
++++GA+A L ++A V
Sbjct: 107 RMVVGAAALLTVLAWV 122
>gb|AAM29561.1| RH04289p [Drosophila melanogaster]
Length = 171
Score = 56.6 bits (135), Expect = 5e-07
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Frame = +1
Query: 103 ALLRSPATQEAMQQLAASTSFGAQQFRFIGGDRVPEFWGKPSPYTGGTDFLGTPKNHLDL 282
+L+RSPA ++ +Q AAS + + F+ K + LG
Sbjct: 7 SLIRSPALRQGLQMAAASRQVSMKVVSVAETQKDESFFEK-------NERLG-------- 51
Query: 283 IKKRPLSPDVMEIDNKSAHYKFPLGALSSITNRVTGVALSVGFAGAGVFALRGSLD--GV 456
R LSP + Y+ L ++ SI +R TG+AL VG G G+ AL S D
Sbjct: 52 ---RELSPHL-------TIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHY 101
Query: 457 VAACAGSFLIGFPL---KFLVSYAIIYHWLGGLRHIVWDVSKIGNQADRTSLLELPKVEM 627
V G L G L KF+++Y YH G+RH++WD + L++ +V
Sbjct: 102 VTMVEGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGR---------FLKIKEVYS 152
Query: 628 SSKVLLGASAALALIAAVL 684
+ ++ S L+ I A+L
Sbjct: 153 TGYAMVATSFVLSAILALL 171
>ref|NP_797222.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|28805829|dbj|BAC59106.1| succinate dehydrogenase,
cytochrome b556 subunit [Vibrio parahaemolyticus]
Length = 130
Score = 56.6 bits (135), Expect = 5e-07
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Frame = +1
Query: 286 KKRPLSPDVMEIDNKSAHYKFPLGALSSITNRVTGVALSVGFAGAGVFALRGSLDGVVAA 465
K RP++ D+ I +FP+ A++SI +RV+GV V G ++ L SL +
Sbjct: 9 KSRPVNLDLQTI-------RFPITAIASILHRVSGVITFVA-VGILLWLLSISLSSHMGF 60
Query: 466 CAGSFLI-GFPLKFL---VSYAIIYHWLGGLRHIVWDVSKIGNQADRTSLLELPKVEMSS 633
+ ++ GF +KF+ + A+ YH GG+RH++ D+ EL MS+
Sbjct: 61 MEAADIVDGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFE---------ELDSGAMSA 111
Query: 634 KVLLGASAALALIAAVL 684
KV GA+A L+L+A +L
Sbjct: 112 KVAFGATAVLSLLAGIL 128
>gb|AAL49350.1| RH44771p [Drosophila melanogaster]
Length = 171
Score = 56.2 bits (134), Expect = 6e-07
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Frame = +1
Query: 103 ALLRSPATQEAMQQLAASTSFGAQQFRFIGGDRVPEFWGKPSPYTGGTDFLGTPKNHLDL 282
+L+RSPA ++ +Q AAS + + F+ K + LG
Sbjct: 7 SLIRSPALRQGLQMAAASRPVSMKVVSVAETQKDESFFEK-------NERLG-------- 51
Query: 283 IKKRPLSPDVMEIDNKSAHYKFPLGALSSITNRVTGVALSVGFAGAGVFALRGSLD--GV 456
R LSP + Y+ L ++ SI +R TG+AL VG G G+ AL S D
Sbjct: 52 ---RELSPHL-------TIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHY 101
Query: 457 VAACAGSFLIGFPL---KFLVSYAIIYHWLGGLRHIVWDVSKIGNQADRTSLLELPKVEM 627
V G L G L KF+++Y YH G+RH++WD + L++ +V
Sbjct: 102 VTMVEGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGR---------FLKIKEVYS 152
Query: 628 SSKVLLGASAALALIAAVL 684
+ ++ S L+ I A+L
Sbjct: 153 TGYAMVATSFVLSAILALL 171