KCC001011A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001011A_C01 KCC001011A_c01
ccgcttccactaGTCAACACGAGAAATGCAGGCATAACCATGGCATTTAGGGAGGCCAGG
ACCGTAGTGAGAGCACTGGGGTGAAAACAGAGATTTCATTCAGTAGTCGCCGCCCTAGTT
CACGCAACCTAGCCCGGCACCATGGGAGCCTATCTATCGTCGCCTATTACTGATAAGGAA
GTGTTTGAGGGAGATGGGCATGGCCTACGCTTCGGGGGCGGCGCTATGCAGGGTTGGCGC
CGCACCATGGAGGATGCGCACGTCGCCGAGGTCAACGTCGCAAACGACCCCAACGTGGCC
ATGTTTGGCGTGTTTGACGGTCACGGAGGAGCAGAGGTAGCAAAGTTCTGCCAGAAGTAT
ATGGCCGCGGAGCTGCAGCGGTTTGAGGAGTTTGGCAAGGGCAGCGTAGAGGACAGCCTC
GTCAAGGTCTTCCACCGAATGGACGAGATGCTTCGCGACCAGCGGTACGCGGAGGAGCTG
GAAAAGCTCAAGTCGAAAGAGTCCACGAGGACGAGGGGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001011A_C01 KCC001011A_c01
         (520 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_194914.1| protein phosphatase 2C (PP2C), putative [Arabid...   112  3e-24
ref|NP_180079.1| protein phosphatase 2C (PP2C), putative [Arabid...   111  5e-24
gb|AAG43835.1|AF213455_1 protein phosphatase type-2C [Zea mays]       109  2e-23
sp|P49444|P2C_PARTE Protein phosphatase 2C (PP2C) gi|1078808|pir...   100  9e-21
gb|AAB17351.1| protein phosphatase type 2C [Saccharomyces cerevi...    95  6e-19

>ref|NP_194914.1| protein phosphatase 2C (PP2C), putative [Arabidopsis thaliana]
           gi|7488279|pir||T06308 protein phosphatase 2C homolog
           F11C18.60 - Arabidopsis thaliana
           gi|4584525|emb|CAB40756.1| protein phosphatase 2C-like
           protein [Arabidopsis thaliana]
           gi|7270089|emb|CAB79904.1| protein phosphatase 2C-like
           protein [Arabidopsis thaliana]
           gi|16209698|gb|AAL14406.1| AT4g31860/F11C18_60
           [Arabidopsis thaliana] gi|21360433|gb|AAM47332.1|
           AT4g31860/F11C18_60 [Arabidopsis thaliana]
          Length = 357

 Score =  112 bits (280), Expect = 3e-24
 Identities = 58/119 (48%), Positives = 76/119 (63%)
 Frame = +1

Query: 142 MGAYLSSPITDKEVFEGDGHGLRFGGGAMQGWRRTMEDAHVAEVNVANDPNVAMFGVFDG 321
           MG YLS+P TDK   +G+ H LR+G  +MQGWR +MEDAH A +++  D N +  GV+DG
Sbjct: 1   MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDL--DDNTSFLGVYDG 58

Query: 322 HGGAEVAKFCQKYMAAELQRFEEFGKGSVEDSLVKVFHRMDEMLRDQRYAEELEKLKSK 498
           HGG  V+KFC KY+  ++   E +  G V  SL K F RMDEM++ QR   EL  L  K
Sbjct: 59  HGGKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDK 117

>ref|NP_180079.1| protein phosphatase 2C (PP2C), putative [Arabidopsis thaliana]
           gi|25355104|pir||H84643 probable protein phosphatase 2C
           [imported] - Arabidopsis thaliana
           gi|4559345|gb|AAD23006.1| putative protein phosphatase
           2C [Arabidopsis thaliana] gi|15292879|gb|AAK92810.1|
           putative protein phosphatase 2C [Arabidopsis thaliana]
           gi|18652943|dbj|BAB84700.1| protein phosphatase 2C
           [Arabidopsis thaliana] gi|20258909|gb|AAM14148.1|
           putative protein phosphatase 2C [Arabidopsis thaliana]
          Length = 355

 Score =  111 bits (278), Expect = 5e-24
 Identities = 59/119 (49%), Positives = 76/119 (63%)
 Frame = +1

Query: 142 MGAYLSSPITDKEVFEGDGHGLRFGGGAMQGWRRTMEDAHVAEVNVANDPNVAMFGVFDG 321
           MG YLSSP T+K   +G+   LRFG  +MQGWR TMEDAH A +++  D   + FGV+DG
Sbjct: 1   MGTYLSSPKTEKLSEDGENDKLRFGLSSMQGWRATMEDAHAAILDL--DDKTSFFGVYDG 58

Query: 322 HGGAEVAKFCQKYMAAELQRFEEFGKGSVEDSLVKVFHRMDEMLRDQRYAEELEKLKSK 498
           HGG  VAKFC KY+  ++   E +  G VE SL + F RMD+M++ QR   EL  L  K
Sbjct: 59  HGGKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMDDMMQGQRGWRELAVLGDK 117

>gb|AAG43835.1|AF213455_1 protein phosphatase type-2C [Zea mays]
          Length = 366

 Score =  109 bits (272), Expect = 2e-23
 Identities = 58/119 (48%), Positives = 76/119 (63%)
 Frame = +1

Query: 142 MGAYLSSPITDKEVFEGDGHGLRFGGGAMQGWRRTMEDAHVAEVNVANDPNVAMFGVFDG 321
           M  YLS+P TDK   +G+   L+FG  +MQGWR TMEDAH A +++ ND   A FGVFDG
Sbjct: 1   MVIYLSTPKTDKVSEDGENDKLKFGLSSMQGWRATMEDAHSALLDLDND--TASFGVFDG 58

Query: 322 HGGAEVAKFCQKYMAAELQRFEEFGKGSVEDSLVKVFHRMDEMLRDQRYAEELEKLKSK 498
           HGG  VAKFC KY+  E+   E +  G +  ++ + + RMDEM+R QR   EL+ L  K
Sbjct: 59  HGGKVVAKFCAKYLHREVLHTEAYAAGDLGAAVHRAYLRMDEMMRGQRGWRELQALGDK 117

>sp|P49444|P2C_PARTE Protein phosphatase 2C (PP2C) gi|1078808|pir||A55804 phosphoprotein
           phosphatase (EC 3.1.3.16) 2c, membrane-bound -
           Paramecium tetraurelia gi|2654382|emb|CAA85448.1| PP2C
           [Paramecium tetraurelia]
          Length = 300

 Score =  100 bits (250), Expect = 9e-21
 Identities = 51/121 (42%), Positives = 73/121 (60%)
 Frame = +1

Query: 142 MGAYLSSPITDKEVFEGDGHGLRFGGGAMQGWRRTMEDAHVAEVNVANDPNVAMFGVFDG 321
           MG YLS P  DK    G G  + F    MQGWR TMEDAH+   ++  D  V++FGVFDG
Sbjct: 1   MGPYLSQPKRDKTTTTGQGKSVIFAASEMQGWRNTMEDAHIHRHDIIQD--VSVFGVFDG 58

Query: 322 HGGAEVAKFCQKYMAAELQRFEEFGKGSVEDSLVKVFHRMDEMLRDQRYAEELEKLKSKE 501
           HGG EVA+F +K+   EL + + F +   E++L + F +MDE+L      +EL + K+ +
Sbjct: 59  HGGREVAQFVEKHFVDELLKNKNFKEQKFEEALKETFLKMDELLLTPEGQKELNQYKATD 118

Query: 502 S 504
           +
Sbjct: 119 T 119

>gb|AAB17351.1| protein phosphatase type 2C [Saccharomyces cerevisiae]
          Length = 468

 Score = 94.7 bits (234), Expect = 6e-19
 Identities = 49/116 (42%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
 Frame = +1

Query: 142 MGAYLSSPITDKEVFEGDGHGLRFGGGAMQGWRRTMEDAHVAEVNV---ANDPNVAMFGV 312
           MG  LS+PI DKE   G      FG  AMQGWR +MEDAH+ E N+   +++ ++A +G+
Sbjct: 1   MGQILSNPIIDKEHHSGTDCLTAFGLCAMQGWRMSMEDAHIVEPNLLAESDEEHLAFYGI 60

Query: 313 FDGHGGAEVAKFCQKYMAAELQRFEEFGKGSVEDSLVKVFHRMD-EMLRDQRYAEE 477
           FDGHGG+ VA+FC   M + L++ E F  G +E  L+  F   D E+L+D++  ++
Sbjct: 61  FDGHGGSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATDVELLKDEKLKDD 116



EST assemble image


clone accession position
1 LC021b05_r AV620364 1 525
2 CM010a06_r AV386961 6 482
3 HCL020b12_r AV640666 13 504
4 MX244h05_r BP091826 236 510




Chlamydomonas reinhardtii
Kazusa DNA Research Institute