KCC001010A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001010A_C01 KCC001010A_c01
gtagacaTAAAATATGCAGGCCACCGGGCTCCAGGCCCCTGCCACTCGGGCAGGTCGCGG
CATCACTCGCGGCCGCGCGCTCTGCGTGGCTCCTAGGGCCACAGCAACCATGGAGCCTTC
CACTTCTACCTCTTCTGCTCCTAGCTCGACTCAGTTCCTGCGCAAGCACATTCTGAAGCT
GGCGCCTTACACGCCAATTGAGCCGTTTGAGGTGCTTTCCTCTCGTTACAACCGCAAGCC
TGAGGATATTATTAAGCTAGACGCAAATGAGAACCCATATGGACCGCCCCCGGAGGTGCG
GGAAGCACTGGCGACCATGCCTTTCCCTCACATCTACCCGGACCCGGAGACCCGCGCCCT
GCGGAGAGCGCTTGCGGAGATGCACAATATCCCGATGGAGAACCTGCTGGTGGGCTGCGG
CGCGGACGAGCTAATCGACCTGCTCATGCGCTGTGTGCTGGAGCCCGGTGACAAGATCGT
GGACTGCCCGCCCACCTTCACCATGTACGTGTTTGATGCCGACGTCAACGACGCGCGGGT
GGTGACGGTGCCGCGCCTGGACGGCTTCCGCATTGACGTGGAGGCCGTCAAGCGTGCGGT
GGTGGAGCACACGCCACAGTGGTGTCCTGAGCAGCCCAAAACCCGACGCTCATGATCGGA
GCGACTGTCTCCTCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001010A_C01 KCC001010A_c01
         (675 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC20728.1| histidinol phosphate aminotransferase [Nicotiana...   223  2e-57
pir||T03270 probable histidinol-phosphate transaminase (EC 2.6.1...   223  2e-57
ref|NP_568226.1| histidinol-phosphate aminotransferase, putative...   208  5e-53
gb|AAL87150.1|AF480496_4 putative histidinol phosphate aminotran...   208  7e-53
ref|NP_177337.1| histidinol-phosphate aminotransferase, putative...   199  2e-50

>emb|CAC20728.1| histidinol phosphate aminotransferase [Nicotiana plumbaginifolia]
          Length = 413

 Score =  223 bits (568), Expect = 2e-57
 Identities = 111/186 (59%), Positives = 133/186 (70%)
 Frame = +2

Query: 68  RGRALCVAPRATATMEPSTSTSSAPSSTQFLRKHILKLAPYTPIEPFEVLSSRYNRKPED 247
           R R +C+A  ++  ++  +      +   F+R H+LKL+PY PI PFEVLS+R  RKPED
Sbjct: 29  RRRIICMA--SSVPVQEESQQKQRVTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPED 86

Query: 248 IIKLDANENPYGPPPEVREALATMPFPHIYPDPETRALRRALAEMHNIPMENLLVGCGAD 427
           I+KLDANENPYGPPPEV EAL  M FP+IYPDPE+R LR ALAE   +  E +L GCGAD
Sbjct: 87  IVKLDANENPYGPPPEVIEALGAMKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGAD 146

Query: 428 ELIDLLMRCVLEPGDKIVDCPPTFTMYVFDADVNDARVVTVPRLDGFRIDVEAVKRAVVE 607
           ELIDL+MRCVL+PGD IVDCPPTFTMY FDA VN A V+ VPR   F +DVE +   VVE
Sbjct: 147 ELIDLIMRCVLDPGDMIVDCPPTFTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAE-VVE 205

Query: 608 HTPQWC 625
           H    C
Sbjct: 206 HEKPKC 211

>pir||T03270 probable histidinol-phosphate transaminase (EC 2.6.1.9) - common
           tobacco gi|3355626|emb|CAA70403.1| histidinol-phosphate
           aminotransferase [Nicotiana tabacum]
          Length = 413

 Score =  223 bits (568), Expect = 2e-57
 Identities = 111/186 (59%), Positives = 133/186 (70%)
 Frame = +2

Query: 68  RGRALCVAPRATATMEPSTSTSSAPSSTQFLRKHILKLAPYTPIEPFEVLSSRYNRKPED 247
           R R +C+A  ++  ++  +      +   F+R H+LKL+PY PI PFEVLS+R  RKPED
Sbjct: 29  RRRIICMA--SSVPVQEESQQKQRVTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPED 86

Query: 248 IIKLDANENPYGPPPEVREALATMPFPHIYPDPETRALRRALAEMHNIPMENLLVGCGAD 427
           I+KLDANENPYGPPPEV EAL  M FP+IYPDPE+R LR ALAE   +  E +L GCGAD
Sbjct: 87  IVKLDANENPYGPPPEVIEALGAMKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGAD 146

Query: 428 ELIDLLMRCVLEPGDKIVDCPPTFTMYVFDADVNDARVVTVPRLDGFRIDVEAVKRAVVE 607
           ELIDL+MRCVL+PGD IVDCPPTFTMY FDA VN A V+ VPR   F +DVE +   VVE
Sbjct: 147 ELIDLIMRCVLDPGDMIVDCPPTFTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAE-VVE 205

Query: 608 HTPQWC 625
           H    C
Sbjct: 206 HEKPKC 211

>ref|NP_568226.1| histidinol-phosphate aminotransferase, putative [Arabidopsis
           thaliana] gi|15292797|gb|AAK92767.1| putative
           histidinol-phosphate aminotransferase [Arabidopsis
           thaliana] gi|21436321|gb|AAM51330.1| putative
           histidinol-phosphate aminotransferase [Arabidopsis
           thaliana]
          Length = 417

 Score =  208 bits (530), Expect = 5e-53
 Identities = 103/184 (55%), Positives = 133/184 (71%)
 Frame = +2

Query: 68  RGRALCVAPRATATMEPSTSTSSAPSSTQFLRKHILKLAPYTPIEPFEVLSSRYNRKPED 247
           R R  C A  ++A ++ S + +   S   F+R H+ +LA Y PI PFEVLS++  RKPED
Sbjct: 35  RNRVYC-AQSSSAAVDESKNITMGDS---FIRPHLRQLAAYQPILPFEVLSAQLGRKPED 90

Query: 248 IIKLDANENPYGPPPEVREALATMPFPHIYPDPETRALRRALAEMHNIPMENLLVGCGAD 427
           I+KLDANENPYGPPPEV EAL  M FP++YPDP++R LR ALA+   +  E +LVGCGAD
Sbjct: 91  IVKLDANENPYGPPPEVFEALGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGAD 150

Query: 428 ELIDLLMRCVLEPGDKIVDCPPTFTMYVFDADVNDARVVTVPRLDGFRIDVEAVKRAVVE 607
           ELIDL+MRCVL+PG+KI+DCPPTF+MYVFDA VN A V+ VPR   F ++V+ +   V  
Sbjct: 151 ELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVEL 210

Query: 608 HTPQ 619
             P+
Sbjct: 211 EKPK 214

>gb|AAL87150.1|AF480496_4 putative histidinol phosphate aminotransferase [Oryza sativa
           (japonica cultivar-group)]
          Length = 378

 Score =  208 bits (529), Expect = 7e-53
 Identities = 102/172 (59%), Positives = 120/172 (69%)
 Frame = +2

Query: 104 ATMEPSTSTSSAPSSTQFLRKHILKLAPYTPIEPFEVLSSRYNRKPEDIIKLDANENPYG 283
           A    +  T   PS   F+R+H+  LAPY PI PFEVLS+R  RKPEDIIKLDANENPYG
Sbjct: 12  AAAAAAAETKRGPSGASFIREHLRSLAPYQPILPFEVLSARLGRKPEDIIKLDANENPYG 71

Query: 284 PPPEVREALATMPFPHIYPDPETRALRRALAEMHNIPMENLLVGCGADELIDLLMRCVLE 463
           PPPEV +AL  + FP++YPDPE+R LR ALAE   +  E +L GCGADELIDL+MRCVLE
Sbjct: 72  PPPEVAKALGNLKFPYVYPDPESRQLRAALAEDSGLESEYILAGCGADELIDLIMRCVLE 131

Query: 464 PGDKIVDCPPTFTMYVFDADVNDARVVTVPRLDGFRIDVEAVKRAVVEHTPQ 619
           PGDKIVDCPPTFTMY FDA VN A V+          DV  + + V +  P+
Sbjct: 132 PGDKIVDCPPTFTMYEFDASVNGALVIK---------DVAQIVKVVEQEKPK 174

>ref|NP_177337.1| histidinol-phosphate aminotransferase, putative [Arabidopsis
           thaliana] gi|11280235|pir||T50821 histidinol-phosphate
           aminotransferase-like protein - Arabidopsis thaliana
           gi|8953414|emb|CAB96689.1| histidinol-phosphate
           aminotransferase-like protein [Arabidopsis thaliana]
           gi|12324546|gb|AAG52232.1|AC021665_15 putative
           histidinol-phosphate aminotransferase; 39506-41337
           [Arabidopsis thaliana]
          Length = 415

 Score =  199 bits (507), Expect = 2e-50
 Identities = 100/184 (54%), Positives = 130/184 (70%)
 Frame = +2

Query: 68  RGRALCVAPRATATMEPSTSTSSAPSSTQFLRKHILKLAPYTPIEPFEVLSSRYNRKPED 247
           R R  C A  ++A ++ S + +   S   F+R H+ +LA Y PI PFEVLS++  RKPED
Sbjct: 35  RNRVYC-AQSSSAAVDESKNITMGDS---FIRPHLRQLAAYQPILPFEVLSAQLGRKPED 90

Query: 248 IIKLDANENPYGPPPEVREALATMPFPHIYPDPETRALRRALAEMHNIPMENLLVGCGAD 427
           I+KLDANENPYGPPPE    L  M FP++YPDP++R LR ALA+   +  E +LVGCGAD
Sbjct: 91  IVKLDANENPYGPPPEA--TLGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGAD 148

Query: 428 ELIDLLMRCVLEPGDKIVDCPPTFTMYVFDADVNDARVVTVPRLDGFRIDVEAVKRAVVE 607
           ELIDL+MRCVL+PG+KI+DCPPTF+MYVFDA VN A V+ VPR   F ++V+ +   V  
Sbjct: 149 ELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVEL 208

Query: 608 HTPQ 619
             P+
Sbjct: 209 EKPK 212



EST assemble image


clone accession position
1 LC071h11_r AV624028 1 486
2 CM013d05_r AV387056 7 544
3 LC060g01_r AV623229 8 530
4 MX225g05_r BP090568 10 304
5 CM010a03_r AV386988 95 528
6 CM010a02_r AV387024 95 675




Chlamydomonas reinhardtii
Kazusa DNA Research Institute