Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000997A_C01 KCC000997A_c01
(1507 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK30367.1|AF305080_1 cytochrome c oxidase subunit II [Chlamy... 518 e-146
gb|AAK30365.1|AF305078_1 cytochrome c oxidase subunit II [Polyto... 298 1e-79
dbj|BAB21506.1| cytochrome c oxidase subunit 2 [Chlamydomonas re... 254 2e-66
ref|NP_057974.1| cytochrome oxidase subunit 2 [Scenedesmus obliq... 148 3e-34
gb|AAF43635.1|AF207677_1 cytochrome oxidase subunit 2 [Teramnus ... 145 2e-33
>gb|AAK30367.1|AF305080_1 cytochrome c oxidase subunit II [Chlamydomonas reinhardtii]
gi|17226674|gb|AAL37900.1|AF443624_1 cytochrome c
oxidase subunit II [Chlamydomonas reinhardtii]
Length = 284
Score = 518 bits (1333), Expect(2) = e-146
Identities = 266/278 (95%), Positives = 269/278 (96%)
Frame = +2
Query: 152 LGQQACFAATCCRAQQKEGNKLVWNAMLFSSKAEGSAVQQVVASEGVAQAVPQFSSEAAA 331
L F + ++QQKEGNKLVWNAMLFSSKAEGSAVQQVVASEGVAQAVPQFSSEAAA
Sbjct: 7 LSANKLFCSNLLQSQQKEGNKLVWNAMLFSSKAEGSAVQQVVASEGVAQAVPQFSSEAAA 66
Query: 332 ALAAKRRGLIGSGMSLAPSKPFAARGLTSAAKPAAAAAAGAAEAAQPADKYAGLKKVLKA 511
ALAAKRRGLIGSGMSLAPSKPFAARGLTSAAKPAAAAAAGAAEAAQPADKYAGLKKVLKA
Sbjct: 67 ALAAKRRGLIGSGMSLAPSKPFAARGLTSAAKPAAAAAAGAAEAAQPADKYAGLKKVLKA 126
Query: 512 AAALAAALGLTTTTAAADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMM 691
AAALAAALGLTTTTAAADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMM
Sbjct: 127 AAALAAALGLTTTTAAADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMM 186
Query: 692 FQIITKFHYSKVLKPEKLTHHTTMEVIWTIIPTLIVVMIAIPSLTLIYSLDQHTERPGLT 871
FQIITKFHYSKVLKPEKLTHHTTMEVIWTIIPTLIVVMIAIPSLTLIYSLDQHTERPGLT
Sbjct: 187 FQIITKFHYSKVLKPEKLTHHTTMEVIWTIIPTLIVVMIAIPSLTLIYSLDQHTERPGLT 246
Query: 872 VKIIGRQWYWSYEMHDHLQHKLLDPDRLVGIAEKALVK 985
VKIIGRQWYWSYEMHDHLQHKLLDPDRLVGIAEKALVK
Sbjct: 247 VKIIGRQWYWSYEMHDHLQHKLLDPDRLVGIAEKALVK 284
Score = 24.6 bits (52), Expect(2) = e-146
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 132 MLRQSGLSANK 164
MLRQSGLSANK
Sbjct: 1 MLRQSGLSANK 11
>gb|AAK30365.1|AF305078_1 cytochrome c oxidase subunit II [Polytomella sp. 'Pringsheim
198.80'] gi|13604155|gb|AAK32115.1|AF305541_1 cytochrome
c oxidase subunit II [Polytomella sp. 'Pringsheim
198.80']
Length = 271
Score = 298 bits (764), Expect = 1e-79
Identities = 146/258 (56%), Positives = 189/258 (72%)
Frame = +2
Query: 212 KLVWNAMLFSSKAEGSAVQQVVASEGVAQAVPQFSSEAAAALAAKRRGLIGSGMSLAPSK 391
K +WNA SK + + V AS + QFS + A+A+A+K++ ++GSG+SLA +
Sbjct: 16 KYMWNAAQMGSKNIATVSETVQASTAAPEVGAQFSFKEASAMASKKQNVVGSGLSLASRQ 75
Query: 392 PFAARGLTSAAKPAAAAAAGAAEAAQPADKYAGLKKVLKAAAALAAALGLTTTTAAADSP 571
F+ G +A+ P+ A A A+ + + +KK +KAAAA+ AALGLT TA+A++P
Sbjct: 76 TFS--GSFAASAPSGARAIATQAEAKAQTETSSIKKFIKAAAAVVAALGLTAGTASAEAP 133
Query: 572 QPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMMFQIITKFHYSKVLKPEKLTH 751
WQL FQD+ATS AQA DLHHDIFFFL+ V LVFY ++ I TKFHY+K PEKLTH
Sbjct: 134 VAWQLGFQDSATSQAQAAFDLHHDIFFFLLNTVVLVFYFLYHIATKFHYTKQALPEKLTH 193
Query: 752 HTTMEVIWTIIPTLIVVMIAIPSLTLIYSLDQHTERPGLTVKIIGRQWYWSYEMHDHLQH 931
HT +EVIWT+IPT+IVV+IAIPSLTL+Y++D H ++PGLTVK+IGRQWYWSYEMHDHLQH
Sbjct: 194 HTAIEVIWTVIPTIIVVLIAIPSLTLVYAIDSHNDKPGLTVKVIGRQWYWSYEMHDHLQH 253
Query: 932 KLLDPDRLVGIAEKALVK 985
KLLD DRLV IAEK + K
Sbjct: 254 KLLDADRLVAIAEKTITK 271
>dbj|BAB21506.1| cytochrome c oxidase subunit 2 [Chlamydomonas reinhardtii]
Length = 132
Score = 254 bits (650), Expect = 2e-66
Identities = 131/132 (99%), Positives = 131/132 (99%)
Frame = +2
Query: 371 MSLAPSKPFAARGLTSAAKPAAAAAAGAAEAAQPADKYAGLKKVLKAAAALAAALGLTTT 550
MSLAPSKPFAARGLTSAAKPAAAAAAGAAEAAQPADKYAGLKKVLKAAAALAAALGLTTT
Sbjct: 1 MSLAPSKPFAARGLTSAAKPAAAAAAGAAEAAQPADKYAGLKKVLKAAAALAAALGLTTT 60
Query: 551 TAAADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMMFQIITKFHYSKVL 730
TAAADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMMFQIITKFHYSKVL
Sbjct: 61 TAAADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMMFQIITKFHYSKVL 120
Query: 731 KPEKLTHHTTME 766
KPEKLT HTTME
Sbjct: 121 KPEKLTQHTTME 132
>ref|NP_057974.1| cytochrome oxidase subunit 2 [Scenedesmus obliquus]
gi|7711036|emb|CAB90360.1| cytochrome oxidase subunit 2
[Scenedesmus obliquus]
gi|8099197|gb|AAF72052.1|AF204057_7 cytochrome c oxidase
subunit 2 [Scenedesmus obliquus]
Length = 149
Score = 148 bits (373), Expect = 3e-34
Identities = 62/126 (49%), Positives = 92/126 (72%)
Frame = +2
Query: 560 ADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMMFQIITKFHYSKVLKPE 739
AD+P WQ LFQD ATS + ++DLH DI FFLI ++ LV ++ +I+ FH++ PE
Sbjct: 13 ADAPMAWQKLFQDPATSNMEGIVDLHADICFFLIVILVLVLWLGARILVSFHHNLQPVPE 72
Query: 740 KLTHHTTMEVIWTIIPTLIVVMIAIPSLTLIYSLDQHTERPGLTVKIIGRQWYWSYEMHD 919
+ HHT++E++W I+P++IV +IA+PSL+L+Y+ D +P LTVK+ GRQWYWSY M++
Sbjct: 73 RFNHHTSLELVWAILPSVIVTLIALPSLSLVYTYDDLVSKPALTVKVTGRQWYWSYAMNE 132
Query: 920 HLQHKL 937
H+Q L
Sbjct: 133 HVQMNL 138
>gb|AAF43635.1|AF207677_1 cytochrome oxidase subunit 2 [Teramnus uncinatus]
Length = 253
Score = 145 bits (366), Expect = 2e-33
Identities = 63/130 (48%), Positives = 90/130 (68%)
Frame = +2
Query: 533 LGLTTTTAAADSPQPWQLLFQDTATSTAQAMIDLHHDIFFFLITVVTLVFYMMFQIITKF 712
L L T A D+ +PWQL FQD AT Q +IDLHHDIFFFLI ++ V +++ + + F
Sbjct: 4 LWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWILVRALWHF 63
Query: 713 HYSKVLKPEKLTHHTTMEVIWTIIPTLIVVMIAIPSLTLIYSLDQHTERPGLTVKIIGRQ 892
HY K P+++ H TT+E++WTI P++I++ IAIPS L+YS+D+ P +T+K IG Q
Sbjct: 64 HYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQ 123
Query: 893 WYWSYEMHDH 922
WYW+YE D+
Sbjct: 124 WYWTYEYSDY 133
