KCC000994A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000994A_C01 KCC000994A_c01
gcaccaggcgaccctggcgccgcccgcccccgcccccgcccccatctcgggcgcctcctc
ctccggctccggcttcctggCCAACAACATCGTGCAGGCGGCGCCCAAGGGGGCCATCGC
GCTGGGCGCCTCGGACCCCGTGCGCGACTACGAGGAGGCAGACAAGTTCCAGGTGGTGGA
GGTGGGCGCCGTCGTGGAGACCGCTGGCGCCACCGCCACGCTCAAGGCCACCGCGCCCGT
CGCCGCCAAGAAGGCCCTGGACGTCCTGACGGTGTCGGAGCTCAAGTCCGAGCTCAAGCG
CCGCGGCCTGTCGTCGCTGGGCACCCGCCGCGAGCTCATTACGCGCCTGCAGCAGGCCGG
CCTGTGAGCGAGGCGTGCGCCTGGATAGCTGGCGGCTGGAGGCGGGTGGTGGAGGCGGAG
CCGGGAGGTTAGGGCGGGGCAGGCGTGAGGCGAGTGCGCGGCGGTACCGGCGTGTACACG
CGAGAGCGGCCAGGGAGGGTTGGACTGCGTGTGCTGGCGCGGCGCCTGGCGTGGGCGTGC
ATGTGGGTGGGTGCCGGCCCGCCTTGGGGCTGTAGCGGGCACGGGGTTGTGTTCATTCGG
TGTTGGTTTTGGTCTTCTGCGGTGTTTCGGTCGACATGGTGAGATGGCTGGTTGCATCAC
CTCGATGCGCGTACTGGCATCGACGGTACACAGGACATGCCACGACTGCGCTGATGCGTG
CCTTGCCAAATGCATCCAAACCGACGGGGGCAGCGGCGGTGCAGAAGGAGAAAAGAGCTG
CATAGAACGGAGTAACAGTTACAATGGCAAACAGGAAACGTCGGTTGGTCGGTATTGTTC
CTGGTGAGGTTGGGGTGGATGGTGGCGGTAAGGCCGCGTCACCGGGTAACATGGATTGAA
GCTTTGGTTTTTATACAAGTACAATAAAATAAGTGCAGCTGGAGCTGTACCAAGCAAGAG
GACAAATGCAGCCCAGGTCTTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000994A_C01 KCC000994A_c01
         (982 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_828477.1| putative proline-rich protein [Streptomyces ave...    62  1e-08
gb|AAM33652.1|AF508983_1 mastigoneme-like protein [Chlamydomonas...    60  6e-08
gb|AAK94670.1| subtilisin-like protein [Toxoplasma gondii]             60  6e-08
dbj|BAC87637.1| unnamed protein product [Homo sapiens]                 60  6e-08
pir||S51939 chitinase (EC 3.2.1.14) precursor - beet gi|488731|e...    60  7e-08

>ref|NP_828477.1| putative proline-rich protein [Streptomyces avermitilis MA-4680]
           gi|29610968|dbj|BAC75012.1| putative proline-rich
           protein [Streptomyces avermitilis MA-4680]
          Length = 206

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 36/89 (40%), Positives = 41/89 (45%), Gaps = 7/89 (7%)
 Frame = +3

Query: 3   TRRPWRRPPPPPPPSRAPPPPAPASWPTTSCRRRPR-------GPSRWAPRTPCATTRRQ 161
           T  P   PPPPPPP   PP P P   P+ +   RPR        P R AP  P A   R 
Sbjct: 75  TPTPTLTPPPPPPPPPPPPAPTPTPTPSPTPTERPRPTPRPDPPPPRPAPPPPVAVAPRP 134

Query: 162 TSSRWWRWAPSWRPLAPPPRSRPPRPSPP 248
           T +      P+  P   P R+R PRPSPP
Sbjct: 135 TPTP----TPTPTPTPTPTRTRAPRPSPP 159

 Score = 39.7 bits (91), Expect = 0.079
 Identities = 39/132 (29%), Positives = 46/132 (34%)
 Frame = -3

Query: 503 PTLPGRSRVYTPVPPRTRLTPAPP*PPGSASTTRLQPPAIQAHASLTGRPAAGA**ARGG 324
           P  P  +   TP PP     P PP PP + + T    P        T RP          
Sbjct: 71  PPCPTPTPTLTPPPP-----PPPPPPPPAPTPTPTPSPTPTERPRPTPRPDPPP-----P 120

Query: 323 CPATTGRGA*ART*APTPSGRPGPSWRRRARWP*AWRWRQRSPRRRPPPPPGTCLPPRSR 144
            PA     A A    PTP+  P P+             R R+PR  PPP       PR  
Sbjct: 121 RPAPPPPVAVAPRPTPTPTPTPTPT---------PTPTRTRAPRPSPPPEASPVSYPRYH 171

Query: 143 ARGPRRPARWPP 108
           A   +RP R  P
Sbjct: 172 ASAHQRPPRGGP 183

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 27/94 (28%), Positives = 31/94 (32%), Gaps = 14/94 (14%)
 Frame = +3

Query: 9   RPWRRPPPPPPPSRAPPP--------------PAPASWPTTSCRRRPRGPSRWAPRTPCA 146
           RP  RP PPPP    PPP              P P   PT +   RP  P      +P +
Sbjct: 110 RPTPRPDPPPPRPAPPPPVAVAPRPTPTPTPTPTPTPTPTRTRAPRPSPPPE---ASPVS 166

Query: 147 TTRRQTSSRWWRWAPSWRPLAPPPRSRPPRPSPP 248
             R   S+                  RPPR  PP
Sbjct: 167 YPRYHASA----------------HQRPPRGGPP 184

>gb|AAM33652.1|AF508983_1 mastigoneme-like protein [Chlamydomonas reinhardtii]
          Length = 1997

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 35/91 (38%), Positives = 44/91 (47%)
 Frame = +3

Query: 18   RRPPPPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSRWWRWAPSW 197
            R    PPPPS +PPPP PAS        RP  P+  +PR P                P+ 
Sbjct: 1860 RTEQSPPPPSPSPPPPPPAS-------PRPPSPNPPSPRPPSPAPPSPNPP------PTS 1906

Query: 198  RPLAPPPRSRPPRPSPPRRPWTS*RCRSSSP 290
            +P +PPP   PPRP PPRRP  + R  ++ P
Sbjct: 1907 QPPSPPPSPPPPRPPPPRRPHPARRPPTALP 1937

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 23/68 (33%), Positives = 25/68 (35%), Gaps = 8/68 (11%)
 Frame = -3

Query: 185  PPPPPGTCLPPRSRARGPRRPARWPPWAPPARCCWPGS--------RSRRRRRPRWGRGR 30
            PPPPP +  PP      PR P+  PP   P     P S        R    RRP   R  
Sbjct: 1873 PPPPPASPRPPSPNPPSPRPPSPAPPSPNPPPTSQPPSPPPSPPPPRPPPPRRPHPARRP 1932

Query: 29   GRAAPGSP 6
              A P  P
Sbjct: 1933 PTALPPPP 1940

>gb|AAK94670.1| subtilisin-like protein [Toxoplasma gondii]
          Length = 795

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 51/134 (38%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
 Frame = +3

Query: 3   TRRPWRRPPPPP--PPSR-APPPPAPASWPTTSCRRRPRGPSRWAPRT-PCATTRRQTSS 170
           T +P   PPP P  PPS  +PPPP P S P+ S R  P  PS  +PRT PCA +    + 
Sbjct: 580 TPQPQPHPPPQPETPPSAPSPPPPTPPSAPSPSPRTPPSAPSP-SPRTPPCAPSPPPPTP 638

Query: 171 RWWRWAPSWRPLAPPPRS-RPPRPSPPRRPWTS*RCRSSSPSSSAAACRRWAPAASSLRA 347
                APS  P  PPP S   P P  P  P      RS  PS         AP  S   +
Sbjct: 639 ---PCAPSPSPPTPPPGSPHKPEPQTPVYPEVPRSTRSPPPSPPPTESAPGAP-PSDTPS 694

Query: 348 CSRPACERGVRLDS 389
           C  P C    R  S
Sbjct: 695 CRVPPCSSSPRSGS 708

 Score = 38.1 bits (87), Expect = 0.23
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
 Frame = -1

Query: 694 PVYRRC-QYAHRGDATSHLTMSTETPQKTKTNTE*TQPRARYSPKAGRHPPTCTPTPGAA 518
           P  +RC +YA    A          P  T+T+T    P A+ +P+   HPP    TP +A
Sbjct: 539 PDAKRCVEYALTTHAEGRHKSFRREPS-TETSTPPPSPPAQPTPQPQPHPPPQPETPPSA 597

Query: 517 PAHAVQPSLAALACTRRYRRALASRLPR--PNLPAPPPP-PASSRQLSRRTP 371
           P+       +A + + R   +  S  PR  P  P+PPPP P  +   S  TP
Sbjct: 598 PSPPPPTPPSAPSPSPRTPPSAPSPSPRTPPCAPSPPPPTPPCAPSPSPPTP 649

 Score = 37.7 bits (86), Expect = 0.30
 Identities = 37/144 (25%), Positives = 48/144 (32%), Gaps = 7/144 (4%)
 Frame = -2

Query: 663  EVMQPAISPCRPKHRRRPKPTPNEHNPVPATAPRRAGTHPHARPRQAPRQHTQSNPPWPL 484
            E    A SP  P     P P+P      P+ +PR     P   P   P   + S P  P 
Sbjct: 592  ETPPSAPSPPPPTPPSAPSPSPRTPPSAPSPSPRTPPCAPSPPPPTPPCAPSPSPPTPPP 651

Query: 483  SRVHAGTAAHSPHACPALTSRLRLHHPPPAASYPGARLAHRPAC-------CRRVMSSRR 325
               H        +     ++R     PPP  S PGA  +  P+C         R  S  +
Sbjct: 652  GSPHKPEPQTPVYPEVPRSTRSPPPSPPPTESAPGAPPSDTPSCRVPPCSSSPRSGSQPK 711

Query: 324  VPSDDRPRRLSSDLSSDTVRTSRA 253
             P D+        LSS     S A
Sbjct: 712  PPQDNTTTPKMPSLSSPPTEHSTA 735

>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
          Length = 286

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 48/131 (36%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
 Frame = +3

Query: 3   TRRPWRRPPPPPPPSRAPPPPAPASWPTTSCRRR-------PRGPSRWAP-RTPCATTRR 158
           TR P  R PP  PP+R PP  +PA  P T    R        R P R +P RTP   + R
Sbjct: 77  TRAPPTRMPPTAPPTRTPPTASPARTPPTESPARTPPTASPARTPPRASPTRTPPRASPR 136

Query: 159 QTSSRWWRWAPSWRPLAPPPRSRPPRPSPPRRPWTS*RCRSSSPSSSAAACRRWAPAASS 338
           +T S     +P+  P    PR  PPR SP R P  +    S   +   A+ RR  P AS 
Sbjct: 137 RTPS---TASPTRTPPRASPRRTPPRASPTRTPPRA----SPKRTPPRASPRRTPPRASP 189

Query: 339 LRACSRPACER 371
            RA  R + +R
Sbjct: 190 TRAPPRASPKR 200

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 60/183 (32%), Positives = 67/183 (35%), Gaps = 3/183 (1%)
 Frame = -3

Query: 587 TPCPLQPQGGPAPTHMHAHARRRASTRSPTLPGRSRVYTPVPPRTRLTPAPP*PPGSAST 408
           +P    P+  P  T   A  RR     S T P      T +PP    T  PP    +AS 
Sbjct: 44  SPTRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPP----TASP 99

Query: 407 TRLQPPAIQAHASLTGRPAAGA**ARGGCPATTGRGA*ART*APTPSGRPGPSWRRRARW 228
            R  P    A    T  PA            T  R +  RT  P  S R  PS     R 
Sbjct: 100 ARTPPTESPARTPPTASPA-----------RTPPRASPTRT-PPRASPRRTPSTASPTRT 147

Query: 227 P*AWRWRQRSPRRRPPPPPGTCLPPR-SRARGPRR--PARWPPWAPPARCCWPGSRSRRR 57
           P      + SPRR PP    T  PPR S  R P R  P R PP A P R   P   S +R
Sbjct: 148 P-----PRASPRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRASPTRA--PPRASPKR 200

Query: 56  RRP 48
             P
Sbjct: 201 TPP 203

 Score = 50.4 bits (119), Expect = 5e-05
 Identities = 69/229 (30%), Positives = 80/229 (34%), Gaps = 7/229 (3%)
 Frame = -3

Query: 680 MPVRASR*CNQPSHHVDRNTAEDQNQHRMNTTPCPLQPQGGPAPTHMHAHARRRASTRSP 501
           MP RAS     P     R T    +  R        +P     PT M   A     TR+P
Sbjct: 39  MPPRASP-TRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTA---PPTRTP 94

Query: 500 TLPGRSRVY-TPVPPRTRLTPAPP*PPGSASTTRLQPPAIQAHASLTGRPAAGA**ARGG 324
                +R   T  P RT  T +P   P  AS TR  P A       T  P       R  
Sbjct: 95  PTASPARTPPTESPARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTP--PRAS 152

Query: 323 CPATTGRGA*ART*APTPSGRPGPSWRRRARWP*AWRWR---QRSPRRRPPPPPGTCLPP 153
              T  R +  RT       R  P    R   P A   R   + SP+R PP    T  PP
Sbjct: 153 PRRTPPRASPTRTPPRASPKRTPPRASPRRTPPRASPTRAPPRASPKRTPPTASPTRTPP 212

Query: 152 RS---RARGPRRPARWPPWAPPARCCWPGSRSRRRRRPRWGRGRGRAAP 15
           R+   R      PAR PP A P R     S +R   R    R   RA+P
Sbjct: 213 RASPTRTPPTESPARTPPRASPTRTPPTESPARTPSRASTRRTPPRASP 261

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 40/115 (34%), Positives = 49/115 (41%), Gaps = 3/115 (2%)
 Frame = +3

Query: 21  RPPPPPPPSRAPPPPAPASWPTTSCRRR--PR-GPSRWAPRTPCATTRRQTSSRWWRWAP 191
           RPP    P+R PP  +P   P  +  RR  PR  P R  PR   + TR  T     R  P
Sbjct: 29  RPPTRASPTRMPPRASPTRTPPRASPRRTPPRASPRRTPPR--ASLTRPPT-----RAPP 81

Query: 192 SWRPLAPPPRSRPPRPSPPRRPWTS*RCRSSSPSSSAAACRRWAPAASSLRACSR 356
           +  P   PP   PP  SP R P T    R+   +S A    R +P  +  RA  R
Sbjct: 82  TRMPPTAPPTRTPPTASPARTPPTESPARTPPTASPARTPPRASPTRTPPRASPR 136

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 38/118 (32%), Positives = 49/118 (41%)
 Frame = +3

Query: 18  RRPPPPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSRWWRWAPSW 197
           RR PP   P+RAPP  +P   P T+       P+R  PR                 +P+ 
Sbjct: 181 RRTPPRASPTRAPPRASPKRTPPTA------SPTRTPPRA----------------SPTR 218

Query: 198 RPLAPPPRSRPPRPSPPRRPWTS*RCRSSSPSSSAAACRRWAPAASSLRACSRPACER 371
            P    P   PPR SP R P T     S + + S A+ RR  P AS  R   R + +R
Sbjct: 219 TPPTESPARTPPRASPTRTPPT----ESPARTPSRASTRRTPPRASPTRTPPRASPKR 272

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 56/181 (30%), Positives = 62/181 (33%), Gaps = 14/181 (7%)
 Frame = -3

Query: 587 TPCPLQPQGGPAPTHMHAHARRRASTRSPTL-----------PGRSRVYTPV---PPRTR 450
           +P    P+  P  T   A  RR  ST SPT            P  S   TP    P RT 
Sbjct: 116 SPARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPKRTP 175

Query: 449 LTPAPP*PPGSASTTRLQPPAIQAHASLTGRPAAGA**ARGGCPATTGRGA*ART*APTP 270
              +P   P  AS TR  P A       T  P       R     T    + ART  P  
Sbjct: 176 PRASPRRTPPRASPTRAPPRASPKRTPPTASPTRTP--PRASPTRTPPTESPART-PPRA 232

Query: 269 SGRPGPSWRRRARWP*AWRWRQRSPRRRPPPPPGTCLPPRSRARGPRRPARWPPWAPPAR 90
           S    P     AR P      + S RR PP    T  PPR+       P R PP A P  
Sbjct: 233 SPTRTPPTESPARTP-----SRASTRRTPPRASPTRTPPRA------SPKRTPPTASPTS 281

Query: 89  C 87
           C
Sbjct: 282 C 282

 Score = 46.6 bits (109), Expect = 7e-04
 Identities = 43/135 (31%), Positives = 55/135 (39%), Gaps = 23/135 (17%)
 Frame = +3

Query: 21  RPPPPPPPSRAPPPPAPASWPTT----------SCRRRP------RGPSRWAP-RTPCAT 149
           R PP   P+R PP  +P   P+T          S RR P      R P R +P RTP   
Sbjct: 119 RTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRTPPRASPKRTPPRA 178

Query: 150 TRRQTSSRWW------RWAPSWRPLAPPPRSRPPRPSPPRRPWTS*RCRSSSPSSSAAAC 311
           + R+T  R        R +P   P    P   PPR SP R P T    R+   +S     
Sbjct: 179 SPRRTPPRASPTRAPPRASPKRTPPTASPTRTPPRASPTRTPPTESPARTPPRASPTRTP 238

Query: 312 RRWAPAASSLRACSR 356
              +PA +  RA +R
Sbjct: 239 PTESPARTPSRASTR 253

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 32/90 (35%), Positives = 40/90 (43%), Gaps = 3/90 (3%)
 Frame = +3

Query: 18  RRPPPPPPPSRAPPPPAPASWPTTS--CRRRPR-GPSRWAPRTPCATTRRQTSSRWWRWA 188
           +R PP   P+R PP  +P   P T    R  PR  P+R  P    A T  + S+R  R  
Sbjct: 199 KRTPPTASPTRTPPRASPTRTPPTESPARTPPRASPTRTPPTESPARTPSRASTR--RTP 256

Query: 189 PSWRPLAPPPRSRPPRPSPPRRPWTS*RCR 278
           P   P   PPR+ P R  P   P +  R R
Sbjct: 257 PRASPTRTPPRASPKRTPPTASPTSCIRHR 286

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 50/167 (29%), Positives = 58/167 (33%), Gaps = 1/167 (0%)
 Frame = -3

Query: 512 TRSPTLPGRSRV-YTPVPPRTRLTPAPP*PPGSASTTRLQPPAIQAHASLTGRPAAGA** 336
           TR+P     +R+ YT     T LT     PP  AS TR+ P A                 
Sbjct: 10  TRTPHTTSLTRILYT-----TSLTR----PPTRASPTRMPPRA----------------- 43

Query: 335 ARGGCPATTGRGA*ART*APTPSGRPGPSWRRRARWP*AWRWRQRSPRRRPPPPPGTCLP 156
                P  T   A  R   P  S R  P      R P      +  P R PP  P T  P
Sbjct: 44  ----SPTRTPPRASPRRTPPRASPRRTPPRASLTRPP-----TRAPPTRMPPTAPPTRTP 94

Query: 155 PRSRARGPRRPARWPPWAPPARCCWPGSRSRRRRRPRWGRGRGRAAP 15
           P +       PAR PP   PAR     S +R   R    R   RA+P
Sbjct: 95  PTAS------PARTPPTESPARTPPTASPARTPPRASPTRTPPRASP 135

>pir||S51939 chitinase (EC 3.2.1.14) precursor - beet gi|488731|emb|CAA55883.1|
           chitinase [Beta vulgaris subsp. vulgaris]
           gi|829258|emb|CAA56946.1| Chitinase [Beta vulgaris
           subsp. vulgaris]
          Length = 439

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 36/84 (42%), Positives = 39/84 (45%)
 Frame = +3

Query: 6   RRPWRRPPPPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSRWWRW 185
           R P  RPPPP PP+  PPPP P +        RP  P    PR P   T R    R    
Sbjct: 55  RPPTPRPPPPRPPTPRPPPPRPPTPRPPPPTPRPPPPRPPTPRPPPPPTPRPPPPR---- 110

Query: 186 APSWRPLAPPPRSRPPRPSPPRRP 257
            P+ RP  PPP  RPP P  PR P
Sbjct: 111 PPTPRP-PPPPTPRPPPPPTPRPP 133

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 34/84 (40%), Positives = 35/84 (41%)
 Frame = +3

Query: 6   RRPWRRPPPPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSRWWRW 185
           R P  RPPPP PP+  PPPP P   P      RP  P    P  P   T R       R 
Sbjct: 65  RPPTPRPPPPRPPTPRPPPPTPRPPPPRPPTPRPPPPPTPRPPPPRPPTPRPPPPPTPRP 124

Query: 186 APSWRPLAPPPRSRPPRPSPPRRP 257
            P   P  PPP    PRP PP  P
Sbjct: 125 PPPPTPRPPPPSPPTPRPPPPPPP 148

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 36/82 (43%), Positives = 38/82 (45%)
 Frame = +3

Query: 12  PWRRPPPPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSRWWRWAP 191
           P  RPPPP PP+  PPPP P   P       PR P    PR P   T R          P
Sbjct: 84  PTPRPPPPRPPTPRPPPP-PTPRPPPPRPPTPRPPPPPTPRPPPPPTPRPPPPS----PP 138

Query: 192 SWRPLAPPPRSRPPRPSPPRRP 257
           + RP  PPP S PP PSPP  P
Sbjct: 139 TPRPPPPPPPS-PPTPSPPSPP 159

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 37/91 (40%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = +3

Query: 6   RRPWRRPP---PPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSRW 176
           R P  RPP   PPPP  R PPP  P   P      RP  P    PR P   T R      
Sbjct: 70  RPPPPRPPTPRPPPPTPRPPPPRPPTPRPPPPPTPRPPPPRPPTPRPPPPPTPRPPP--- 126

Query: 177 WRWAPSWRPLAP-PPRSRPPRPSPPRRPWTS 266
               P+ RP  P PP  RPP P PP  P  S
Sbjct: 127 ---PPTPRPPPPSPPTPRPPPPPPPSPPTPS 154

 Score = 50.4 bits (119), Expect = 5e-05
 Identities = 33/83 (39%), Positives = 34/83 (40%)
 Frame = +3

Query: 9   RPWRRPPPPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSRWWRWA 188
           RP R  PP PP  R PPP  P   P       PR P    P TP     R  +    R  
Sbjct: 47  RPSRPTPPRPPTPRPPPPRPPTPRPPPPRPPTPRPP----PPTPRPPPPRPPTP---RPP 99

Query: 189 PSWRPLAPPPRSRPPRPSPPRRP 257
           P   P  PPPR   PRP PP  P
Sbjct: 100 PPPTPRPPPPRPPTPRPPPPPTP 122

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 33/85 (38%), Positives = 36/85 (41%), Gaps = 4/85 (4%)
 Frame = +3

Query: 6   RRPWRRPPPPP----PPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATTRRQTSSR 173
           R P  RPPPPP    PP   P PP P S PT     RP  P   +P TP   +       
Sbjct: 110 RPPTPRPPPPPTPRPPPPPTPRPP-PPSPPTP----RPPPPPPPSPPTPSPPS------- 157

Query: 174 WWRWAPSWRPLAPPPRSRPPRPSPP 248
                PS  P   PP   PP P+PP
Sbjct: 158 ----PPSPEP-PTPPEPTPPTPTPP 177

 Score = 39.7 bits (91), Expect = 0.079
 Identities = 22/47 (46%), Positives = 24/47 (50%)
 Frame = +3

Query: 12  PWRRPPPPPPPSRAPPPPAPASWPTTSCRRRPRGPSRWAPRTPCATT 152
           P  RPPPPPPPS  PP P+P S P+      P  P    P TP   T
Sbjct: 138 PTPRPPPPPPPS--PPTPSPPSPPSP----EPPTPPEPTPPTPTPPT 178

 Score = 38.9 bits (89), Expect = 0.14
 Identities = 43/125 (34%), Positives = 44/125 (34%)
 Frame = -3

Query: 470 PVPPRTRLTPAPP*PPGSASTTRLQPPAIQAHASLTGRPAAGA**ARGGCPATTGRGA*A 291
           P PPR    P P  PP    T R  PP        T RP           P  T R    
Sbjct: 51  PTPPRP---PTPRPPPPRPPTPRPPPP-----RPPTPRP-----------PPPTPRPPPP 91

Query: 290 RT*APTPSGRPGPSWRRRARWP*AWRWRQRSPRRRPPPPPGTCLPPRSRARGPRRPARWP 111
           R   PTP  RP P    R   P     R  +PR  PPP P    PP  R   P  P   P
Sbjct: 92  R--PPTP--RPPPPPTPRPPPP-----RPPTPRPPPPPTPRPPPPPTPRPPPPSPPTPRP 142

Query: 110 PWAPP 96
           P  PP
Sbjct: 143 PPPPP 147

 Score = 37.4 bits (85), Expect = 0.39
 Identities = 45/144 (31%), Positives = 47/144 (32%), Gaps = 4/144 (2%)
 Frame = -3

Query: 515 STRSPTLPGRSRVYTPVPPRTRLTPAPP*PPGSASTTRLQPPAIQAHASLTGRPAAGA** 336
           S   P+ P   R  TP PP  R  P P  PP    T R  PP        T RP      
Sbjct: 44  SVGRPSRPTPPRPPTPRPPPPR-PPTPRPPPPRPPTPRPPPP--------TPRPPPPRPP 94

Query: 335 ARGGCPATTGRGA*ART*APTP----SGRPGPSWRRRARWP*AWRWRQRSPRRRPPPPPG 168
                P  T R    R   P P    + RP P    R   P         P  RPPPPP 
Sbjct: 95  TPRPPPPPTPRPPPPRPPTPRPPPPPTPRPPPPPTPRPPPP-------SPPTPRPPPPP- 146

Query: 167 TCLPPRSRARGPRRPARWPPWAPP 96
              PP      P  P    P  PP
Sbjct: 147 ---PPSPPTPSPPSPPSPEPPTPP 167

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 26/66 (39%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
 Frame = -3

Query: 278 PTPSGRPGPSWRRRARWP*AWRWRQRSPRRRPP---PPPGTCLPPRSRARGPRRPARWPP 108
           PTP   P P      R P       R P  RPP   PPP T  PP  R   PR P    P
Sbjct: 51  PTPPRPPTP------RPPPPRPPTPRPPPPRPPTPRPPPPTPRPPPPRPPTPRPPPPPTP 104

Query: 107 WAPPAR 90
             PP R
Sbjct: 105 RPPPPR 110

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 32/90 (35%), Positives = 32/90 (35%)
 Frame = -2

Query: 651 PAISPCRPKHRRRPKPTPNEHNPVPATAPRRAGTHPHARPRQAPRQHTQSNPPWPLSRVH 472
           P   P RP   R P PTP    P P T   R    P  RP   PR  T   PP P  R  
Sbjct: 69  PRPPPPRPPTPRPPPPTPRPPPPRPPTP--RPPPPPTPRP-PPPRPPTPRPPPPPTPRPP 125

Query: 471 AGTAAHSPHACPALTSRLRLHHPPPAASYP 382
                  P   P  T R     PPP  S P
Sbjct: 126 PPPTPRPPPPSPP-TPR---PPPPPPPSPP 151



EST assemble image


clone accession position
1 CM008h02_r AV386758 1 536
2 CM011e04_r AV386931 410 958
3 HC061a11_r AV636556 440 854
4 LC083c08_r AV624827 499 982




Chlamydomonas reinhardtii
Kazusa DNA Research Institute