KCC000993A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000993A_C01 KCC000993A_c01
caaccccccaaacacacacaggtgctggtcacccagctggaggccaagaaGAACGGCTTT
GCTGACGTGGTGTACCTTGACGCCAAGACGGATACGTACCTGGAGGAGGTGTCCTCATGC
AACATCTTCGTGGTCAAGGGCAAGACGATAAAGACGCCGCCGCTGTCGGGCACCATCCTG
CCCGGTGTGACGCGCCGCTCCATCATCGAGCTGGCGCGCAGCCGCGGCTACGACGTGCAG
GAGGCCGCCGTGTCCGTGCACGAGGCCATGGAGGCCGACGAGATCTTCACCACCGGCACG
GCTGTGGTGGTGTCCTCGGTGGGCTCCATGACCTACCGCGGCAACAAGAAGGCCTACACC
GCGCCCGGACAGGCCGGCCCGGTGGCTCTGGAGATGTACTCGGCCCTCACCGACATCCAG
ACCGAGAAGGCCGACGACAAGTTCTCCTGGGTCTACCCCGTCAAGTAAATGCATGCATGC
TTGCTTGCTTGCTGCCTAGATGGCGCGAGAGCATGGGTGCTTGGCTTGACTGACGGACGG
AATGTGGCGGGATGGGATGGGGTGTTGCTTGACAGGGCCCGTGTCAAGATTCGAGCTCGG
CTTTGAAGGGTCTGATTAGAACGCTTGGCAGACGAGGGCAGTGCGTGGGGGCTAGGACTA
GGATAAGGGCGCTAGCGGAGGGAGTGCAGGAGGCTACCGTGCCTTGACGAGGAGGCGGTT
AGCTGTGCTGCCTGCTAGCTGTGATACCCTCTTCCGAGACTGTGCGCACGCACCTCCTGG
TTGCATTTTCGGTAGTTGCCGGCCTGATGGGCAGGAGGCGACCCAGGTGCTGTGTGGTTC
AGTGTGGGGGCCAACGGGCGGCAGAGGCTCGTGGGCTGGGCAGGCCTTGCGTGGGCCGCC
CATTGGCGTGGATGTGGGGGAATGTGGCTGTGCCGAATGGGTACATTGCGTTCGGTGTGG
TGCGAATGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000993A_C01 KCC000993A_c01
         (970 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK43507.1|AC020666_17 putative aminotransferase [Oryza sativ...   160  2e-38
gb|AAF07192.1|AF193846_1 branched-chain amino acid aminotransfer...   156  4e-37
gb|AAN60486.1| Putative aminotransferase [Oryza sativa (japonica...   154  3e-36
sp|Q9FYA6|BCA5_ARATH Branched-chain amino acid aminotransferase ...   150  4e-35
gb|AAM65160.1| branched-chain-amino-acid transaminase-like prote...   150  4e-35

>gb|AAK43507.1|AC020666_17 putative aminotransferase [Oryza sativa (japonica cultivar-group)]
           gi|31433398|gb|AAP54917.1| putative aminotransferase
           [Oryza sativa (japonica cultivar-group)]
          Length = 381

 Score =  160 bits (406), Expect = 2e-38
 Identities = 79/146 (54%), Positives = 106/146 (72%)
 Frame = +1

Query: 13  HTQVLVTQLEAKKNGFADVVYLDAKTDTYLEEVSSCNIFVVKGKTIKTPPLSGTILPGVT 192
           +  VL+ Q  AK+ G++DV+YLDA    YLEEVSSCNIFVVKG  I TP + GTILPG+T
Sbjct: 231 YASVLMAQKIAKEKGYSDVLYLDAVHKKYLEEVSSCNIFVVKGNVISTPAVKGTILPGIT 290

Query: 193 RRSIIELARSRGYDVQEAAVSVHEAMEADEIFTTGTAVVVSSVGSMTYRGNKKAYTAPGQ 372
           R+SII++A S+G+ V+E  VSV E +EADE+F TGTAVVVS VGS+TY+G +  Y     
Sbjct: 291 RKSIIDVALSKGFQVEERLVSVDELLEADEVFCTGTAVVVSPVGSITYQGKRVEYAGNKG 350

Query: 373 AGPVALEMYSALTDIQTEKADDKFSW 450
            G V+ ++Y++LT +Q  +A+D   W
Sbjct: 351 VGVVSQQLYTSLTSLQMGQAEDWLGW 376

>gb|AAF07192.1|AF193846_1 branched-chain amino acid aminotransferase [Solanum tuberosum]
          Length = 377

 Score =  156 bits (395), Expect = 4e-37
 Identities = 78/151 (51%), Positives = 107/151 (70%)
 Frame = +1

Query: 13  HTQVLVTQLEAKKNGFADVVYLDAKTDTYLEEVSSCNIFVVKGKTIKTPPLSGTILPGVT 192
           +  VL  Q  AK  G++DV+YLD     YLEEVSSCN+F+VKG  I TP + GTILPG+T
Sbjct: 228 YAAVLKAQSAAKAKGYSDVLYLDCVQKKYLEEVSSCNVFIVKGNLIVTPAIKGTILPGIT 287

Query: 193 RRSIIELARSRGYDVQEAAVSVHEAMEADEIFTTGTAVVVSSVGSMTYRGNKKAYTAPGQ 372
           R+SII++A S+G+ V+E  VSV E ++ADE+F TGTAVVVS VGS+T++G +  Y   G 
Sbjct: 288 RKSIIDVAISQGFQVEERQVSVDELLDADEVFCTGTAVVVSPVGSITHQGRRVTYGNDG- 346

Query: 373 AGPVALEMYSALTDIQTEKADDKFSWVYPVK 465
            G V+ ++YSALT +Q   ++DK  W+  +K
Sbjct: 347 VGLVSQQLYSALTSLQMGLSEDKMGWIVELK 377

>gb|AAN60486.1| Putative aminotransferase [Oryza sativa (japonica cultivar-group)]
          Length = 405

 Score =  154 bits (388), Expect = 3e-36
 Identities = 78/146 (53%), Positives = 102/146 (69%)
 Frame = +1

Query: 13  HTQVLVTQLEAKKNGFADVVYLDAKTDTYLEEVSSCNIFVVKGKTIKTPPLSGTILPGVT 192
           +  VL  Q  AK+ G++DV+YLDA    YLEEVSSCNIF+VKG  I TP + GTILPG+T
Sbjct: 255 YASVLKAQRIAKQKGYSDVLYLDAVHKKYLEEVSSCNIFIVKGNVISTPAIKGTILPGIT 314

Query: 193 RRSIIELARSRGYDVQEAAVSVHEAMEADEIFTTGTAVVVSSVGSMTYRGNKKAYTAPGQ 372
           R+SI+E+A+ +G+ V+E  VSV E +EADE+F TGTAVVVS VGS+TY G +  Y   G 
Sbjct: 315 RKSILEVAQRKGFMVEERLVSVDELLEADEVFCTGTAVVVSPVGSITYLGQRVEYGNQG- 373

Query: 373 AGPVALEMYSALTDIQTEKADDKFSW 450
            G V  ++Y++LT +Q    DD   W
Sbjct: 374 VGVVCQQLYTSLTSLQMGHVDDCMGW 399

>sp|Q9FYA6|BCA5_ARATH Branched-chain amino acid aminotransferase 5, chloroplast precursor
           (Atbcat-5) gi|9843665|emb|CAC03680.1| branched-chain
           amino acid transaminase 5 [Arabidopsis thaliana]
          Length = 415

 Score =  150 bits (378), Expect = 4e-35
 Identities = 75/146 (51%), Positives = 104/146 (70%)
 Frame = +1

Query: 13  HTQVLVTQLEAKKNGFADVVYLDAKTDTYLEEVSSCNIFVVKGKTIKTPPLSGTILPGVT 192
           +  VL  Q  AK  G++DV+YLD     YLEEVSSCNIF+VK   I TP + GTILPG+T
Sbjct: 266 YAAVLKAQSIAKAKGYSDVLYLDCLHKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGIT 325

Query: 193 RRSIIELARSRGYDVQEAAVSVHEAMEADEIFTTGTAVVVSSVGSMTYRGNKKAYTAPGQ 372
           R+SIIE+ARS+G+ V+E  V+V E +EADE+F TGTAVV+S VGS+TY+  + +Y   G 
Sbjct: 326 RKSIIEVARSQGFKVEERNVTVDELVEADEVFCTGTAVVLSPVGSITYKSQRFSYGEDG- 384

Query: 373 AGPVALEMYSALTDIQTEKADDKFSW 450
            G V+ ++Y++LT +Q   ++D  +W
Sbjct: 385 FGTVSKQLYTSLTSLQMGLSEDNMNW 410

>gb|AAM65160.1| branched-chain-amino-acid transaminase-like protein [Arabidopsis
           thaliana]
          Length = 413

 Score =  150 bits (378), Expect = 4e-35
 Identities = 74/146 (50%), Positives = 102/146 (69%)
 Frame = +1

Query: 13  HTQVLVTQLEAKKNGFADVVYLDAKTDTYLEEVSSCNIFVVKGKTIKTPPLSGTILPGVT 192
           +  VL  Q  AK  G++DV+YLD     YLEEVSSCNIF+VK   I TP + GTILPG+T
Sbjct: 264 YAAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGIT 323

Query: 193 RRSIIELARSRGYDVQEAAVSVHEAMEADEIFTTGTAVVVSSVGSMTYRGNKKAYTAPGQ 372
           R+S+I++AR++G+ V+E  V+V E +EADE+F TGTAVVVS VGS+TY+G + +Y   G 
Sbjct: 324 RKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSY-GEGT 382

Query: 373 AGPVALEMYSALTDIQTEKADDKFSW 450
            G V+ ++Y+ LT +Q    +D   W
Sbjct: 383 FGTVSKQLYTVLTSLQMGLIEDNMKW 408



EST assemble image


clone accession position
1 MXL021c04_r BP094324 1 385
2 MX009c12_r BP086462 51 440
3 CM011h01_r AV386887 62 603
4 CM037a04_r AV388878 254 779
5 CM008h01_r AV386711 348 902
6 MX013b04_r BP086626 589 970




Chlamydomonas reinhardtii
Kazusa DNA Research Institute