KCC000990A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000990A_C01 KCC000990A_c01
gcacgaggcccggccccaccccgcccggccccgtcaagtgcgacgacgacaacgagtgcc
ccaacggctccacctgctgcTGCGTCAACGAGATCTTCAACATGTGCTTCCAGTGGGGTT
GCTGCCCCATGCCCAAGGCCACCTGCTGCGACGACCACGAGCACTGCTGCCCCGCCGACC
TGCCCGTGTGCGACACGGACGCGGGCCGCTGCCTGCCCTCGGCCGGCGTGTTCCTGGGGT
CCAAGCCCTGGGCGGCCAAGACGCCGGCCGTCCGCCGCCCCCGCTCCACGTCGCTGGGCG
GCATGGCGGGCCGCCTGGCGCAGAAGTTCATGGGTGGCGGCCGCGGCTTCCTGCGCCGCG
GCGAGCCGATGAACTAGACATGCGAGTCTGGGTGCGAGTGCGATGGGCGGCGCTGCTACA
ACGGCTGTAGCAGCTGCAGCGGCTGCAGCTGTCTCTGGCGCGCTGCTGTGGCGCTGCGAC
GAAGCTGGGGGAAACGGCAGTAACTAGAGGCGCGTCTGCCATATACACATCGCAAACAAG
CACACGAGCAGCACAGCGGCCCGATCTGCAAGCTCGCGTGTGTTCATTGCGCGCGCTGCA
ACATTGGCGGCCTTAATAGCAATCACGGTCGGCCTGCGGGCGGAAGTGCGAGCCTCAACC
CTCGATTACTCAGCCAGCAGGAGCAGCAGCAGCCACAAAGCAGCCGCTGTCTTTGTAGTC
AGTGGGCGCACTCCCTAATTGTACGATGTACGGACTTGTGTTTTACGGTTTGCTTTCGAG
CCGAGCCGTCTCGCGGTGTGCGCGGGCGGTTGTGGCTGAATGACACAACGATTGAAACAG
ACCCACAGAGCGTGAGCTAGGCGCGGCGGGGCGTTTTAACTATCTTGCTCGGGCGCGGTG
CTAGCGGGATGTGTGGACTGGTTCGCATGTGTGCAGTACGTTTGTTTGCTCTAGTGTGTT
AGGGTGCGTGTGTCCCACCTCTCTGATTTCGGACATCCTGTGTGTCGATGCATCCCGCAC
TTTCTTCGCTGATGCCGGCTGCCTTGCAACACGAACACACGTAACATACCCTGGTGTTGC
AATTCGGTGCTGGCTGTTTGCAGTCTGGAGAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000990A_C01 KCC000990A_c01
         (1112 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD28476.1|AF133838_1 papain-like cysteine protease [Sanderso...   112  2e-23
pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidn...   110  6e-23
gb|AAP41847.1| senescence-associated cysteine protease [Anthuriu...   109  1e-22
emb|CAB53515.1| cysteine protease [Solanum tuberosum]                 109  1e-22
pir||JC4848 cysteine proteinase (EC 3.4.22.-) - Douglas fir gi|1...   109  1e-22

>gb|AAD28476.1|AF133838_1 papain-like cysteine protease [Sandersonia aurantiaca]
          Length = 370

 Score =  112 bits (279), Expect = 2e-23
 Identities = 48/92 (52%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
 Frame = +3

Query: 9   PGPTPPGPVK----CDDDNECPNGSTCCCVNEIFNMCFQWGCCPMPKATCCDDHEHCCPA 176
           PGP+PP PVK    CD+   CP  STCCC+ +    CF WGCCP+  ATCCDDH  CCP 
Sbjct: 265 PGPSPPSPVKPPSVCDNYYSCPESSTCCCLFQYGRSCFAWGCCPLEGATCCDDHSSCCPH 324

Query: 177 DLPVCDTDAGRCLPSAGVFLGSKPWAAKTPAV 272
           D P+C+   G CL S    LG K   A+TPA+
Sbjct: 325 DFPICNVQQGLCLKSKNNPLGVKA-LARTPAI 355

>pir||T12041 cysteine proteinase (EC 3.4.22.-) 3 precursor - kidney bean
           gi|2511693|emb|CAB17076.1| cysteine proteinase precursor
           [Phaseolus vulgaris]
          Length = 455

 Score =  110 bits (274), Expect = 6e-23
 Identities = 50/105 (47%), Positives = 63/105 (59%), Gaps = 4/105 (3%)
 Frame = +3

Query: 9   PGPTPPGPVK----CDDDNECPNGSTCCCVNEIFNMCFQWGCCPMPKATCCDDHEHCCPA 176
           PGP+PP PVK    CD+   C + +TCCC+ E    CF+WGCCP+  ATCCDDH  CCP 
Sbjct: 352 PGPSPPSPVKPPNVCDNYYSCSDSATCCCIFEFGKTCFEWGCCPLEGATCCDDHYSCCPH 411

Query: 177 DLPVCDTDAGRCLPSAGVFLGSKPWAAKTPAVRRPRSTSLGGMAG 311
           D P+C+T AG CL S      + P+  K  A+RR  +   G  AG
Sbjct: 412 DYPICNTYAGTCLRSK-----NNPFGVK--ALRRTPAKPHGAFAG 449

>gb|AAP41847.1| senescence-associated cysteine protease [Anthurium andraeanum]
          Length = 460

 Score =  109 bits (272), Expect = 1e-22
 Identities = 51/107 (47%), Positives = 59/107 (54%), Gaps = 4/107 (3%)
 Frame = +3

Query: 6   RPGPTPPGPVK----CDDDNECPNGSTCCCVNEIFNMCFQWGCCPMPKATCCDDHEHCCP 173
           +P P+PP PVK    CD+   CP  +TCCCV E    CF WGCCP+  A CCDDH  CCP
Sbjct: 354 KPAPSPPSPVKPPTECDNYYSCPESTTCCCVYEYGKYCFAWGCCPLVNAVCCDDHSSCCP 413

Query: 174 ADLPVCDTDAGRCLPSAGVFLGSKPWAAKTPAVRRPRSTSLGGMAGR 314
            D PVC+   G CL S    LG K    +TPA  +P     G   GR
Sbjct: 414 HDYPVCNVKQGICLASKNNPLGVK-MLKRTPA--KPHQAFSGAEGGR 457

>emb|CAB53515.1| cysteine protease [Solanum tuberosum]
          Length = 466

 Score =  109 bits (272), Expect = 1e-22
 Identities = 45/84 (53%), Positives = 54/84 (63%), Gaps = 4/84 (4%)
 Frame = +3

Query: 6   RPGPTPPGPVK----CDDDNECPNGSTCCCVNEIFNMCFQWGCCPMPKATCCDDHEHCCP 173
           +P P+PP PVK    CD+ ++CP G+TCCCV E    CF WGCCP+  ATCC+DH  CCP
Sbjct: 361 KPAPSPPSPVKPPTECDEYSQCPVGTTCCCVLEFRRSCFSWGCCPLEGATCCEDHSSCCP 420

Query: 174 ADLPVCDTDAGRCLPSAGVFLGSK 245
            D PVC+   G C  S G  LG K
Sbjct: 421 HDYPVCNVRQGTCSMSKGNPLGVK 444

>pir||JC4848 cysteine proteinase (EC 3.4.22.-) - Douglas fir
           gi|1208549|gb|AAC49455.1| Pseudotzain
          Length = 454

 Score =  109 bits (272), Expect = 1e-22
 Identities = 47/91 (51%), Positives = 57/91 (61%), Gaps = 4/91 (4%)
 Frame = +3

Query: 9   PGPTPPGPVK----CDDDNECPNGSTCCCVNEIFNMCFQWGCCPMPKATCCDDHEHCCPA 176
           PGP+PP PVK    CD+   CP  +TCCC+ +    C+ WGCCP+  ATCCDDH  CCP+
Sbjct: 357 PGPSPPSPVKPPTVCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPS 416

Query: 177 DLPVCDTDAGRCLPSAGVFLGSKPWAAKTPA 269
           D PVCD DA  CL S     G+K    +TPA
Sbjct: 417 DHPVCDLDAQTCLKSRKDPFGTK-MLKRTPA 446



EST assemble image


clone accession position
1 CM008g03_r AV386715 1 417
2 HCL099a10_r AV645165 126 495
3 LC027g03_r AV620856 152 642
4 HC010e10_r AV632627 171 794
5 LC040g02_r AV621770 292 854
6 LC033c02_r AV621236 617 1112




Chlamydomonas reinhardtii
Kazusa DNA Research Institute