KCC000989A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000989A_C01 KCC000989A_c01
ctcaagcccgcggagcagacgcccatgaccgcactcaaggtggcgcagctggccaaggag
gtgggcctgcccgacggcgtGCTCAACGTGGTCACGGGCTACGGGCCCACAGCCGGCAAC
CGGGTGGCCTCGCACCCCGGCGTGGACAAGACCGCCTTCACTGGCAGTACGGAGGTGGGT
CGCCTGGTGGCCAAGGCCGCGGCGGAGCAGCTCAAGCCGTGCACCCTGGAGCTGGGCGGC
AAGAGCCCCATCATCGTGTGCCCCGACGTGGACGTGGACAAGGCGGTGGCGGACGCGCAC
ATGGCGCTGTTCTTCAACCACGGCCAGTGCTGCGCCGCCGGCTCACGTGTGTACGTGCAC
GAGGCCGTGTACGACGAGTTCGTGCGCAAGAGCACCGAGGCCGCAGCCACCCGCAAGGTG
GGCGACCCGTTCAGCTCTGTGGAGCAGGGGCCGCAGGTGGACGACGACCAGTTCAAGAAG
ATCCTGTCCTACATCGACAGCGGCAAGCGGCAGGGCGCCAAGCTGATGACGGGCGGCGGG
CGCAAGGGCGACCGCGGCTACTACGTGGAGCCCACCGTGTTCGCGGACGTCAAGGACGAC
ATGAAGATTGCGCGTGAGGAGATCTTCGGGCCTGTGCAGTCCATCATGAAGTGGAAGAGC
CTGGACGACGTGATTGCCCGCGCCAACAACTCGCCCTACGGCCTGGCTGCCGGCGTGTTC
TCCAACAATATCGACACCGTCAACACCCTGACACGCGCGCTCAAGAGCGGCACTGTGTGG
GTCAACTGCTACAACCTGTACGACAACGCGGTCCCGTTCGGCGGCTACAAGGAGAGCGGC
ATTGGGCGTGAGAAGGGCGAGTACGCGCTGTCCAACTACACGCAGGTCAAGGCCGTGTAC
CAGCCCCTGTCCAACCCCGCCTGGCGCTAAGCAGTGAGCGGGTGGCGTGAGCGGGGTGTG
GGAGGGGGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000989A_C01 KCC000989A_c01
         (969 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD10505.1| aldehyde dehydrogenase [Polytomella sp. Pringshe...   485  e-136
pir||T02301 aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A precurs...   417  e-115
dbj|BAB92017.1| mitochondrial aldehyde dehydrogenase [Secale cer...   416  e-115
gb|AAL99613.1|AF348417_1 mitochondrial aldehyde dehydrogenase RF...   414  e-114
dbj|BAB62757.1| mitochondrial aldehyde dehydrogenase ALDH2 [Hord...   413  e-114

>emb|CAD10505.1| aldehyde dehydrogenase [Polytomella sp. Pringsheim 198.80]
          Length = 523

 Score =  485 bits (1248), Expect = e-136
 Identities = 233/310 (75%), Positives = 271/310 (87%), Gaps = 1/310 (0%)
 Frame = +1

Query: 1    LKPAEQTPMTALKVAQLAKEVGLPDGVLNVVTGYGPTAGNRVASHPGVDKTAFTGSTEVG 180
            LKPAEQTP++AL +A+LA EVG P+GV+NVVTG+GPT G  +ASH  VDKTAFTGSTEVG
Sbjct: 214  LKPAEQTPLSALLIAKLAAEVGFPEGVINVVTGFGPTVGGPLASHKLVDKTAFTGSTEVG 273

Query: 181  RLVAKAAAEQLKPCTLELGGKSPIIVCPDVDVDKAVADAHMALFFNHGQCCAAGSRVYVH 360
            ++VA+ AAEQ+KPCTLELGGKSPIIVCPDVDVD+AVADAHMALFFNHGQCCAAGSRVYVH
Sbjct: 274  KIVARLAAEQIKPCTLELGGKSPIIVCPDVDVDRAVADAHMALFFNHGQCCAAGSRVYVH 333

Query: 361  EAVYDEFVRKSTEAAATRKVGDPFSS-VEQGPQVDDDQFKKILSYIDSGKRQGAKLMTGG 537
            E +YDEFV K+T+AAA   VGDPFS   +QGPQVD+ QF KILSY++ GK +GAKL  GG
Sbjct: 334  EKIYDEFVEKATKAAANHSVGDPFSGQYDQGPQVDNAQFSKILSYVEHGKAEGAKLNVGG 393

Query: 538  GRKGDRGYYVEPTVFADVKDDMKIAREEIFGPVQSIMKWKSLDDVIARANNSPYGLAAGV 717
             R G++GYYV PTVF++V D+MKIAREEIFGPVQSI+K+ + D+VI RAN S YGLA+GV
Sbjct: 394  CRVGNKGYYVAPTVFSNVTDNMKIAREEIFGPVQSILKYSTFDEVIRRANASDYGLASGV 453

Query: 718  FSNNIDTVNTLTRALKSGTVWVNCYNLYDNAVPFGGYKESGIGREKGEYALSNYTQVKAV 897
            FS ++DTVNTL R L +GTVWVNCYNL+D+AVPFGG+K SGIGREKGEYALSNYT+VKAV
Sbjct: 454  FSKDLDTVNTLVRGLHAGTVWVNCYNLFDSAVPFGGFKTSGIGREKGEYALSNYTKVKAV 513

Query: 898  YQPLSNPAWR 927
            Y PL NPAWR
Sbjct: 514  YMPLVNPAWR 523

>pir||T02301 aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A precursor, mitochondrial
            - common tobacco gi|1743354|emb|CAA71003.1| aldehyde
            dehydrogenase (NAD+) [Nicotiana tabacum]
          Length = 542

 Score =  417 bits (1073), Expect = e-115
 Identities = 204/310 (65%), Positives = 241/310 (76%), Gaps = 2/310 (0%)
 Frame = +1

Query: 1    LKPAEQTPMTALKVAQLAKEVGLPDGVLNVVTGYGPTAGNRVASHPGVDKTAFTGSTEVG 180
            LK AEQTP++A  VA L +E GLP+GVLN+++G+GPTAG  + SH  VDK AFTGST+ G
Sbjct: 232  LKTAEQTPLSAFYVAHLLQEAGLPEGVLNIISGFGPTAGAPLCSHMDVDKLAFTGSTDTG 291

Query: 181  RLVAKAAAEQ-LKPCTLELGGKSPIIVCPDVDVDKAVADAHMALFFNHGQCCAAGSRVYV 357
            + +   AA+  LKP TLELGGKSP IVC D D+D AV  AH ALFFN GQCC AGSR +V
Sbjct: 292  KAILSLAAKSNLKPVTLELGGKSPFIVCEDADIDTAVEQAHFALFFNQGQCCCAGSRTFV 351

Query: 358  HEAVYDEFVRKSTEAAATRKVGDPFSS-VEQGPQVDDDQFKKILSYIDSGKRQGAKLMTG 534
            HE VYDEF+ K+   A  R VGDPF S  EQGPQ+D  QF KI++YI SG   GA L TG
Sbjct: 352  HEKVYDEFLEKAKARALKRTVGDPFKSGTEQGPQIDSKQFDKIMNYIRSGIDSGATLETG 411

Query: 535  GGRKGDRGYYVEPTVFADVKDDMKIAREEIFGPVQSIMKWKSLDDVIARANNSPYGLAAG 714
            G R G+RGYY++PTVF++VKDDM IA++EIFGPVQSI+K+K +DDVI RANNS YGLAAG
Sbjct: 412  GERLGERGYYIKPTVFSNVKDDMLIAQDEIFGPVQSILKFKDVDDVIRRANNSRYGLAAG 471

Query: 715  VFSNNIDTVNTLTRALKSGTVWVNCYNLYDNAVPFGGYKESGIGREKGEYALSNYTQVKA 894
            VF+ NIDT NTLTRAL+ GTVWVNC++ +D  +PFGGYK SG GREKGEY+L NY QVKA
Sbjct: 472  VFTQNIDTANTLTRALRVGTVWVNCFDTFDATIPFGGYKMSGHGREKGEYSLKNYLQVKA 531

Query: 895  VYQPLSNPAW 924
            V  PL NPAW
Sbjct: 532  VVTPLKNPAW 541

>dbj|BAB92017.1| mitochondrial aldehyde dehydrogenase [Secale cereale]
          Length = 549

 Score =  416 bits (1068), Expect = e-115
 Identities = 203/310 (65%), Positives = 246/310 (78%), Gaps = 2/310 (0%)
 Frame = +1

Query: 1    LKPAEQTPMTALKVAQLAKEVGLPDGVLNVVTGYGPTAGNRVASHPGVDKTAFTGSTEVG 180
            LK AEQTP++AL V++L  E GLP+GVLN+V+G+GPTAG  +ASH  VDK AFTGST+ G
Sbjct: 239  LKTAEQTPLSALYVSKLLHEAGLPEGVLNIVSGFGPTAGAALASHMDVDKIAFTGSTDTG 298

Query: 181  RLVAKAAAEQ-LKPCTLELGGKSPIIVCPDVDVDKAVADAHMALFFNHGQCCAAGSRVYV 357
            +++ + +A   LKP TLELGGKSP IV  D D+D+AV  AH ALFFN GQCC AGSR +V
Sbjct: 299  KVILELSARSNLKPVTLELGGKSPFIVMDDADIDQAVELAHFALFFNQGQCCCAGSRTFV 358

Query: 358  HEAVYDEFVRKSTEAAATRKVGDPF-SSVEQGPQVDDDQFKKILSYIDSGKRQGAKLMTG 534
            HE VYDEFV KS   A  R VGDPF   VEQGPQ+DD+QFKKIL YI SG   GA L+TG
Sbjct: 359  HERVYDEFVEKSKARALKRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTG 418

Query: 535  GGRKGDRGYYVEPTVFADVKDDMKIAREEIFGPVQSIMKWKSLDDVIARANNSPYGLAAG 714
            G + GD+GYY++PT+F+DV+D MKIA+EEIFGPVQSI K+  L++VI RAN S YGLAAG
Sbjct: 419  GDKLGDKGYYIQPTIFSDVQDGMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAG 478

Query: 715  VFSNNIDTVNTLTRALKSGTVWVNCYNLYDNAVPFGGYKESGIGREKGEYALSNYTQVKA 894
            VF+NN+DT NTLTRAL++GT+WVNC++++D A+PFGGYK SGIGREKG  +L NY QVKA
Sbjct: 479  VFTNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKA 538

Query: 895  VYQPLSNPAW 924
            V   L NPAW
Sbjct: 539  VVTALKNPAW 548

>gb|AAL99613.1|AF348417_1 mitochondrial aldehyde dehydrogenase RF2B [Zea mays]
            gi|19850253|gb|AAL99614.1|AF348418_1 mitochondrial
            aldehyde dehydrogenase RF2B [Zea mays]
          Length = 550

 Score =  414 bits (1064), Expect = e-114
 Identities = 202/310 (65%), Positives = 242/310 (77%), Gaps = 2/310 (0%)
 Frame = +1

Query: 1    LKPAEQTPMTALKVAQLAKEVGLPDGVLNVVTGYGPTAGNRVASHPGVDKTAFTGSTEVG 180
            LK AEQTP++AL VA L  E GLP+GVLNVV+G+GPTAG  ++SH GVDK AFTGST  G
Sbjct: 240  LKTAEQTPLSALYVANLLHEAGLPEGVLNVVSGFGPTAGAALSSHMGVDKLAFTGSTGTG 299

Query: 181  RLVAKAAAEQ-LKPCTLELGGKSPIIVCPDVDVDKAVADAHMALFFNHGQCCAAGSRVYV 357
            ++V + AA   LKP TLELGGKSP IV  D DVD+AV  AH A+FFN GQCC AGSR +V
Sbjct: 300  QIVLELAARSNLKPVTLELGGKSPFIVMDDADVDQAVELAHQAVFFNQGQCCCAGSRTFV 359

Query: 358  HEAVYDEFVRKSTEAAATRKVGDPF-SSVEQGPQVDDDQFKKILSYIDSGKRQGAKLMTG 534
            HE VYDEFV KS   A  R VGDPF   VEQGPQ+D +QF KIL Y+ SG   GA L+ G
Sbjct: 360  HERVYDEFVEKSKARALKRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAG 419

Query: 535  GGRKGDRGYYVEPTVFADVKDDMKIAREEIFGPVQSIMKWKSLDDVIARANNSPYGLAAG 714
            G R GDRG+Y++PTVFAD KD+MKIAREEIFGPVQ+I+K+  +++VI RAN +PYGLAAG
Sbjct: 420  GDRVGDRGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAG 479

Query: 715  VFSNNIDTVNTLTRALKSGTVWVNCYNLYDNAVPFGGYKESGIGREKGEYALSNYTQVKA 894
            VF+ ++D  NTL+RAL++GTVWVNCY+++D  +PFGGYK SG+GREKG YAL NY Q KA
Sbjct: 480  VFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKA 539

Query: 895  VYQPLSNPAW 924
            V  P+ NPAW
Sbjct: 540  VVTPIKNPAW 549

>dbj|BAB62757.1| mitochondrial aldehyde dehydrogenase ALDH2 [Hordeum vulgare subsp.
            vulgare]
          Length = 549

 Score =  413 bits (1062), Expect = e-114
 Identities = 201/310 (64%), Positives = 245/310 (78%), Gaps = 2/310 (0%)
 Frame = +1

Query: 1    LKPAEQTPMTALKVAQLAKEVGLPDGVLNVVTGYGPTAGNRVASHPGVDKTAFTGSTEVG 180
            LK AEQTP++AL V++L  E GLP+GVLN+++G+GPTAG  +A H  VDK AFTGST+ G
Sbjct: 239  LKTAEQTPLSALYVSKLLHEAGLPEGVLNIISGFGPTAGAALAGHMDVDKIAFTGSTDTG 298

Query: 181  RLVAKAAAEQ-LKPCTLELGGKSPIIVCPDVDVDKAVADAHMALFFNHGQCCAAGSRVYV 357
            +++ + +A   LK  TLELGGKSP IV  D D+D+AV  AH ALFFN GQCC AGSR +V
Sbjct: 299  KVILELSARSNLKAVTLELGGKSPFIVMDDADIDQAVELAHFALFFNQGQCCCAGSRTFV 358

Query: 358  HEAVYDEFVRKSTEAAATRKVGDPF-SSVEQGPQVDDDQFKKILSYIDSGKRQGAKLMTG 534
            HE VYDEFV KS   A  R VGDPF   VEQGPQ+DD+QFKKIL YI SG   GA L+TG
Sbjct: 359  HERVYDEFVEKSKARALKRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTG 418

Query: 535  GGRKGDRGYYVEPTVFADVKDDMKIAREEIFGPVQSIMKWKSLDDVIARANNSPYGLAAG 714
            G + GD+GYY++PT+F+DV+DDMKIA+EEIFGPVQSI K+  L++VI RAN S YGLAAG
Sbjct: 419  GDKLGDKGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAG 478

Query: 715  VFSNNIDTVNTLTRALKSGTVWVNCYNLYDNAVPFGGYKESGIGREKGEYALSNYTQVKA 894
            VF+NN+DT NTLTRAL++GT+WVNC++++D A+PFGGYK SGIGREKG  +L NY QVKA
Sbjct: 479  VFTNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKA 538

Query: 895  VYQPLSNPAW 924
            V   L NPAW
Sbjct: 539  VVTALKNPAW 548



EST assemble image


clone accession position
1 MX053c10_r BP088175 1 442
2 HC032b10_r AV634342 186 693
3 CM008f12_r AV386744 330 882
4 HCL099h11_r AV645229 565 960
5 LCL082b08_r AV630652 669 969




Chlamydomonas reinhardtii
Kazusa DNA Research Institute