>KCC000983A_C01 KCC000983A_c01
tcacccagaaacccattttcaattttgaaAGCGGATTCGTGATTTTCTCCTTGAGCTCTA
TCCATTTGAGGCATGGGGTCTGTTTCGGAAGATTCTACCCCCCCCCTGGTTGCAAACCCC
GAACCCGTTTCATCCTATCTTCTAGCTCATTTGTACAGACATCAACAGACACGCCGATAT
GTCCAAACGTCGCTGATTGTGCTGTTGTCTGGAGCGCAGTTGAAGGTGCGGACTGCGGAC
TACCGAATCCTCTTACGTGCTCCTGCTATCGCCAGAGGACCCAGGAGACACACACGACGA
CTCAAGCGCCCCGAATGCAAACGGCAGACATCAGCCGCAACTACTCAACTGCGTTCCCAC
GTGCGCGCTCTTTGCAGACTGTTTATCTTTCCCAGCCAGCAGAGCGCGCGGCGAGAAACT
GCCAGGCTGATCGGCAACAGCACACGCGCTTACTCCTCAGAGCTAGCCGCAGGGCCGTCC
TCAGTGTAGGACACCTTGACCATGGCCGGCCGAAT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000983A_C01 KCC000983A_c01
         (515 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK96224.1|AF406936_1 co-chaperone CGE1 precursor isoform b [...    45  7e-04
gb|AAK96223.1|AF406935_1 co-chaperone CGE1 precursor isoform a [...    45  7e-04
ref|NP_337503.1| chromosome segregation SMC protein, putative [M...    33  2.2
ref|NP_856591.1| PROBABLE CHROMOSOME PARTITION PROTEIN SMC [Myco...    33  2.2
ref|XP_302710.1| hypothetical protein XP_302710 [Homo sapiens]         33  2.2

>gb|AAK96224.1|AF406936_1 co-chaperone CGE1 precursor isoform b [Chlamydomonas reinhardtii]
          Length = 260

 Score = 44.7 bits (104), Expect = 7e-04
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 515 IRPAMVKVSYTEDGPAASSEE 453
           IRPAMVKVSYTEDGPAASSEE
Sbjct: 240 IRPAMVKVSYTEDGPAASSEE 260

>gb|AAK96223.1|AF406935_1 co-chaperone CGE1 precursor isoform a [Chlamydomonas reinhardtii]
          Length = 258

 Score = 44.7 bits (104), Expect = 7e-04
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 515 IRPAMVKVSYTEDGPAASSEE 453
           IRPAMVKVSYTEDGPAASSEE
Sbjct: 238 IRPAMVKVSYTEDGPAASSEE 258

>ref|NP_337503.1| chromosome segregation SMC protein, putative [Mycobacterium
           tuberculosis CDC1551] gi|17380300|sp|Q10970|SMC_MYCTU
           Chromosome partition protein smc
           gi|13882771|gb|AAK47317.1| chromosome segregation SMC
           protein, putative [Mycobacterium tuberculosis CDC1551]
           gi|16030075|emb|CAC93884.1| SMC protein [Mycobacterium
           tuberculosis]
          Length = 1205

 Score = 33.1 bits (74), Expect = 2.2
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +3

Query: 276 RTQETHTTTQAPRMQTADISRNYSTAFPRARSLQTVYLSQPAERAARNCQADRQQHTRLL 455
           R  +  T  +A R QT D      T   +A+  Q V ++QP +R A +  ADR +   + 
Sbjct: 739 RLLQQRTEQEAVRTQTLDDVIQLETQLRKAQETQRVQVAQPIDRQAISAAADRARGVEVE 798

Query: 456 LRASRRAVLSVGHLDHGR 509
            R + R      +   GR
Sbjct: 799 ARLAVRTAEERANAVRGR 816

>ref|NP_856591.1| PROBABLE CHROMOSOME PARTITION PROTEIN SMC [Mycobacterium bovis
           subsp. bovis AF2122/97] gi|31619693|emb|CAD96633.1|
           PROBABLE CHROMOSOME PARTITION PROTEIN SMC [Mycobacterium
           bovis subsp. bovis AF2122/97]
          Length = 1205

 Score = 33.1 bits (74), Expect = 2.2
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +3

Query: 276 RTQETHTTTQAPRMQTADISRNYSTAFPRARSLQTVYLSQPAERAARNCQADRQQHTRLL 455
           R  +  T  +A R QT D      T   +A+  Q V ++QP +R A +  ADR +   + 
Sbjct: 739 RLLQQRTEQEAVRTQTLDDVIQLETQLRKAQETQRVQVAQPIDRQAISAAADRARGVEVE 798

Query: 456 LRASRRAVLSVGHLDHGR 509
            R + R      +   GR
Sbjct: 799 ARLAVRTAEERANAVRGR 816

>ref|XP_302710.1| hypothetical protein XP_302710 [Homo sapiens]
          Length = 115

 Score = 33.1 bits (74), Expect = 2.2
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
 Frame = +3

Query: 102 PPGCKPRTRFILSSSSFVQTSTDTP-----ICPNVADCAVVWSAVEGADCGLPNPLTCSC 266
           P G  P  R  LS  S   + +DT       CP   +C V+++A       LP+ L  S 
Sbjct: 25  PQGAPPGHRHPLSGPSAFSSESDTSGLDGRWCPRAPECGVLFTATPTPIPDLPSFLAHS- 83

Query: 267 YRQRTQETHTTTQAPRMQTADISRNYSTAFPRARSLQTVYLSQ 395
                         P  QTA  + + ST+ P+ R   + + SQ
Sbjct: 84  -------------VPCSQTARFTASDSTSLPKVRDTASFFPSQ 113

EST assemble image

clone accession position 1 LC035b04_r AV621371 1 515 2 CM008e06_r AV386762 30 280

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