KCC000980A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000980A_C01 KCC000980A_c01
CCGATATAAAAATGGCCCTGAACATGCGTGTTTCCTCTTCCAAGGTCGCTGCCAAGCAGC
AGGGCCGCATCTCCGCGGTGCCGGTTGTGTCGAGCAAGGTGGCCTCCTCCGCCCGCGTGG
CCCCCTTCCAGGGCGCTCCCGTGGCCGCGCAGCGCGCTGCTCTGCTGGTGCGCGCCGCTG
CCGCTACTGAGGTCAAGGCTGCTGAGGGCCGCACTGAGAAGGAGCTGGGCCAGGCCCGCC
CCATCTTCCCCTTCACCGCCATCGTGGGCCAGGATGAGATGAAGCTGGCGCTGATTCTGA
ACGTGATCGACCCCAAGATCGGTGGTGTCATGATCATGGGCGACCGTGGCACTGGCAAGT
CCACCACCATTCGTGCCCTGGCGGATCTGCTGCCCGAGATGCAGGTGGTTGCCAACGACC
CCTTTAACTCGGACCCCACCGACCCCGAGCTGATGAGCGAGGAGGTGCGCAACCGCGTCA
AGGCCGGCGAGCAGCTGCCCGTGTCTTCCAAGAAGATTCCCATGGTGGACCTGCCCCTGG
GCGCCACTGAGGACCGCGTGTGCGGCACCATCGACATCGAGAAGGCGCTGACCGAGGGTG
TCAAGGCGTTCGAGCCCGGCCTGCTGGCCAAGGCCAACCGCGGCATCCTGTACGTGGATG
AGGTCAACCTGCTGGACGACCACCTGGTCGATGTGCTGCTGGACTCGGCCGCCTCCGGCT
GGAACACCGTGGAGCGCGAGGGTATCTCCATCAGCCACCCCGCCCGCTTCATCCTGGTCG
GCTCGGGCAACCCCGAGGAGGGTGAGCTGCGCCCCCAGCTGCTGGATCGCTTCGGCATGC
ACGCCCAGATCGGCACCGTCAAGGACCCCCGCCTGCGTGTGCAGATCGTGTCGCAGCGCT
CGACCTTCGACGAGAACCCCGCCGCCTTCCGCAAGGACTACGAGGCCGGCCAGATGGCGC
TGACCCAGCGCATCGTGGACGCGCGCAAGCTGCTGAAGCAGGGCGAGGTCAACTACGACT
TCCGCGTCAAGATCAGCCAGATCTGCTCGGACCTGAACGTGGACGGCATCCGCGGCGACA
TCGTGACCAACCGCGCCGCCAAGGCCCTGGCCGCCTTCGAGGGCCGCACCGAGGTGACCC
CCGAGGACATCTACCGTGTCATTCCCCTGTGCCTGCGCCACCGCCTCCGGAAAGACCCCC
TGGCTGAGATCGACGACGGTGACCGCGTGCGTGAGATCTTCAAGCAGGTGTTCGGCATGG
AGTAAGCGGCAGGCCTTCATGGTCGTCGTTGGAGCATTTGCGGAAAGGCTGATGGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000980A_C01 KCC000980A_c01
         (1317 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q94FT3|CHLI_CHLRE Magnesium-chelatase subunit chlI, chloropla...   804  0.0
ref|NP_045914.1| Mg-protoporyphyrin IX chelatase [Chlorella vulg...   573  e-162
ref|NP_050837.1| Mg-protoporyphyrin IX chelatase [Nephroselmis o...   551  e-155
ref|NP_484196.1| protoporphyrin IX magnesium chelatase chain [No...   539  e-152
ref|NP_440486.1| Mg chelatase subunit; ChlI [Synechocystis sp. P...   536  e-151

>sp|Q94FT3|CHLI_CHLRE Magnesium-chelatase subunit chlI, chloroplast precursor
            (Mg-protoporphyrin IX chelatase)
            gi|14582814|gb|AAK69657.1|AF343974_1 magnesium-chelatase
            subunit I [Chlamydomonas reinhardtii]
          Length = 417

 Score =  804 bits (2076), Expect = 0.0
 Identities = 416/417 (99%), Positives = 416/417 (99%)
 Frame = +3

Query: 12   MALNMRVSSSKVAAKQQGRISAVPVVSSKVASSARVAPFQGAPVAAQRAALLVRAAAATE 191
            MALNMRVSSSKVAAKQQGRISAVPVVSSKVASSARVAPFQGAPVAAQRAALLVRAAAATE
Sbjct: 1    MALNMRVSSSKVAAKQQGRISAVPVVSSKVASSARVAPFQGAPVAAQRAALLVRAAAATE 60

Query: 192  VKAAEGRTEKELGQARPIFPFTAIVGQDEMKLALILNVIDPKIGGVMIMGDRGTGKSTTI 371
            VKAAEGRT KELGQARPIFPFTAIVGQDEMKLALILNVIDPKIGGVMIMGDRGTGKSTTI
Sbjct: 61   VKAAEGRTGKELGQARPIFPFTAIVGQDEMKLALILNVIDPKIGGVMIMGDRGTGKSTTI 120

Query: 372  RALADLLPEMQVVANDPFNSDPTDPELMSEEVRNRVKAGEQLPVSSKKIPMVDLPLGATE 551
            RALADLLPEMQVVANDPFNSDPTDPELMSEEVRNRVKAGEQLPVSSKKIPMVDLPLGATE
Sbjct: 121  RALADLLPEMQVVANDPFNSDPTDPELMSEEVRNRVKAGEQLPVSSKKIPMVDLPLGATE 180

Query: 552  DRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTV 731
            DRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTV
Sbjct: 181  DRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTV 240

Query: 732  EREGISISHPARFILVGSGNPEEGELRPQLLDRFGMHAQIGTVKDPRLRVQIVSQRSTFD 911
            EREGISISHPARFILVGSGNPEEGELRPQLLDRFGMHAQIGTVKDPRLRVQIVSQRSTFD
Sbjct: 241  EREGISISHPARFILVGSGNPEEGELRPQLLDRFGMHAQIGTVKDPRLRVQIVSQRSTFD 300

Query: 912  ENPAAFRKDYEAGQMALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTN 1091
            ENPAAFRKDYEAGQMALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTN
Sbjct: 301  ENPAAFRKDYEAGQMALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTN 360

Query: 1092 RAAKALAAFEGRTEVTPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFGME 1262
            RAAKALAAFEGRTEVTPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFGME
Sbjct: 361  RAAKALAAFEGRTEVTPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFGME 417

>ref|NP_045914.1| Mg-protoporyphyrin IX chelatase [Chlorella vulgaris]
            gi|3023488|sp|P56304|CHLI_CHLVU Magnesium-chelatase
            subunit chlI (Mg-protoporphyrin IX chelatase)
            gi|7521334|pir||T07342 probable protoporphyrin IX
            magnesium chelatase (EC 4.99.1.-) - Chlorella vulgaris
            chloroplast gi|2224506|dbj|BAA57990.1| Mg-protoporhyrin
            IX [Chlorella vulgaris]
          Length = 354

 Score =  573 bits (1478), Expect = e-162
 Identities = 284/349 (81%), Positives = 317/349 (90%)
 Frame = +3

Query: 216  EKELGQARPIFPFTAIVGQDEMKLALILNVIDPKIGGVMIMGDRGTGKSTTIRALADLLP 395
            E  L QARP+FPFTAIVGQ+EMKLALILNVIDPKIGGVMIMGDRGTGKSTT+RAL DLLP
Sbjct: 6    ENSLEQARPVFPFTAIVGQEEMKLALILNVIDPKIGGVMIMGDRGTGKSTTVRALVDLLP 65

Query: 396  EMQVVANDPFNSDPTDPELMSEEVRNRVKAGEQLPVSSKKIPMVDLPLGATEDRVCGTID 575
            E+QVVA+DPFNSDP DPELMS+EVR R++  E +P+++KKI MVDLPLGATEDRVCGTID
Sbjct: 66   EIQVVADDPFNSDPKDPELMSQEVRGRLQRKETVPITTKKISMVDLPLGATEDRVCGTID 125

Query: 576  IEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISIS 755
            IEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISIS
Sbjct: 126  IEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISIS 185

Query: 756  HPARFILVGSGNPEEGELRPQLLDRFGMHAQIGTVKDPRLRVQIVSQRSTFDENPAAFRK 935
            HPARFILVGSGNPEEGELRPQLLDRFGMHAQIGTVK+P LRVQIV QR+ FD  P  FR+
Sbjct: 186  HPARFILVGSGNPEEGELRPQLLDRFGMHAQIGTVKEPNLRVQIVEQRANFDAAPLEFRE 245

Query: 936  DYEAGQMALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTNRAAKALAA 1115
             Y+  Q  L  +I++AR LL Q ++ YD+RVKISQICS+L+VDG+RGD+VTNRA+KA+A+
Sbjct: 246  TYQDSQAQLGNQILEARNLLPQIQLEYDYRVKISQICSELDVDGLRGDLVTNRASKAIAS 305

Query: 1116 FEGRTEVTPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFGME 1262
            FEGRTEVTPEDI+RVIPLCLRHRLRKDPL  ID GD+VR+IFK+VFG E
Sbjct: 306  FEGRTEVTPEDIFRVIPLCLRHRLRKDPLESIDSGDKVRDIFKRVFGYE 354

>ref|NP_050837.1| Mg-protoporyphyrin IX chelatase [Nephroselmis olivacea]
            gi|12229764|sp|Q9TL08|CHLI_NEPOL Magnesium-chelatase
            subunit chlI (Mg-protoporphyrin IX chelatase)
            gi|5880715|gb|AAD54808.1|AF137379_31 magnesium chelatase
            subunit of protochlorophyllide reductase [Nephroselmis
            olivacea]
          Length = 355

 Score =  551 bits (1419), Expect = e-155
 Identities = 272/342 (79%), Positives = 304/342 (88%)
 Frame = +3

Query: 231  QARPIFPFTAIVGQDEMKLALILNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPEMQVV 410
            QARP+FPFTAIVGQ+EMKLAL+LNVIDPKIGGVMIMGDRGTGKSTT+RAL DLLPE++VV
Sbjct: 10   QARPVFPFTAIVGQEEMKLALLLNVIDPKIGGVMIMGDRGTGKSTTVRALVDLLPEIEVV 69

Query: 411  ANDPFNSDPTDPELMSEEVRNRVKAGEQLPVSSKKIPMVDLPLGATEDRVCGTIDIEKAL 590
             NDPFNS P DPELMS+EVR +V  GE +  ++ KIPMVDLPLGATEDRVCGTIDIEKAL
Sbjct: 70   ENDPFNSHPYDPELMSDEVREKVHRGESIRTTTTKIPMVDLPLGATEDRVCGTIDIEKAL 129

Query: 591  TEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARF 770
            TEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISI HPARF
Sbjct: 130  TEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISICHPARF 189

Query: 771  ILVGSGNPEEGELRPQLLDRFGMHAQIGTVKDPRLRVQIVSQRSTFDENPAAFRKDYEAG 950
            ILVGSGNPEEGELRPQLLDRFGMHAQIGTV++P LRV+IV QR+TFDENP  FR+ YE  
Sbjct: 190  ILVGSGNPEEGELRPQLLDRFGMHAQIGTVREPELRVKIVEQRATFDENPKEFRQSYETS 249

Query: 951  QMALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTNRAAKALAAFEGRT 1130
            Q +LT ++ +AR  L+Q + +Y  RVKISQ+CS+LNVDG+RGDIVTNRAAKALAA EGRT
Sbjct: 250  QASLTSQLTEARARLRQVQTDYSLRVKISQVCSELNVDGLRGDIVTNRAAKALAALEGRT 309

Query: 1131 EVTPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFG 1256
             V+ EDI R+I LCLRHRLRKDPL  ID G++V+E+F  VFG
Sbjct: 310  SVSVEDIGRIITLCLRHRLRKDPLESIDSGEKVQEVFSIVFG 351

>ref|NP_484196.1| protoporphyrin IX magnesium chelatase chain [Nostoc sp. PCC 7120]
            gi|20137725|sp|P58571|CHLI_ANASP Magnesium-chelatase
            subunit chlI (Mg-protoporphyrin IX chelatase)
            gi|25534246|pir||AH1825 protoporphyrin IX magnesium
            chelatase chain [imported] - Nostoc sp. (strain PCC 7120)
            gi|17135130|dbj|BAB77676.1| protoporphyrin IX magnesium
            chelatase chain [Nostoc sp. PCC 7120]
          Length = 374

 Score =  539 bits (1389), Expect = e-152
 Identities = 266/342 (77%), Positives = 305/342 (88%)
 Frame = +3

Query: 237  RPIFPFTAIVGQDEMKLALILNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPEMQVVAN 416
            R +FPFTAIVGQ+EMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPE+ VVAN
Sbjct: 13   RVVFPFTAIVGQEEMKLALLLNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPEIPVVAN 72

Query: 417  DPFNSDPTDPELMSEEVRNRVKAGEQLPVSSKKIPMVDLPLGATEDRVCGTIDIEKALTE 596
            DPFNSDP+DP+LMS+EVR +   G ++P+  KK+ MVDLPLGATEDRVCGTIDIEKAL+E
Sbjct: 73   DPFNSDPSDPDLMSDEVRQKSGTGAEIPIEFKKVQMVDLPLGATEDRVCGTIDIEKALSE 132

Query: 597  GVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFIL 776
            GVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISI HPARF+L
Sbjct: 133  GVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISIRHPARFVL 192

Query: 777  VGSGNPEEGELRPQLLDRFGMHAQIGTVKDPRLRVQIVSQRSTFDENPAAFRKDYEAGQM 956
            VGSGNPEEGELRPQLLDRFGMHA+I TVK+P LRVQIV QRS FD+NP  F + Y   Q 
Sbjct: 193  VGSGNPEEGELRPQLLDRFGMHAEIHTVKEPALRVQIVEQRSEFDQNPPTFLEKYNPEQT 252

Query: 957  ALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTNRAAKALAAFEGRTEV 1136
            AL ++IV+A+KLL + +++YD RVKIS++CS+L+VDG+RGDIVTNRAAKAL A+EGRTEV
Sbjct: 253  ALQKKIVEAQKLLPEVKLDYDLRVKISEVCSELDVDGLRGDIVTNRAAKALTAYEGRTEV 312

Query: 1137 TPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFGME 1262
            T +DI RVI LCLRHRLRKDPL  ID G +V ++F ++FG+E
Sbjct: 313  TVDDIRRVITLCLRHRLRKDPLESIDSGYKVEKVFARIFGVE 354

>ref|NP_440486.1| Mg chelatase subunit; ChlI [Synechocystis sp. PCC 6803]
            gi|2506284|sp|P51634|CHLI_SYNY3 Magnesium-chelatase
            subunit chlI (Mg-protoporphyrin IX chelatase)
            gi|7470817|pir||S75252 protoporphyrin IX magnesium
            chelatase chain chlI-related protein - Synechocystis sp.
            (strain PCC 6803) gi|1652243|dbj|BAA17166.1| Mg chelatase
            subunit; ChlI [Synechocystis sp. PCC 6803]
          Length = 357

 Score =  536 bits (1381), Expect = e-151
 Identities = 266/341 (78%), Positives = 303/341 (88%)
 Frame = +3

Query: 237  RPIFPFTAIVGQDEMKLALILNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPEMQVVAN 416
            R +FPFTAIVGQDEMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPE++VVAN
Sbjct: 13   RVVFPFTAIVGQDEMKLALLLNVIDPKIGGVMIMGDRGTGKSTTIRALADLLPEIEVVAN 72

Query: 417  DPFNSDPTDPELMSEEVRNRVKAGEQLPVSSKKIPMVDLPLGATEDRVCGTIDIEKALTE 596
            DPFNS P+DPE+MSEEVR RV + E L +  KK+ MVDLPLGATEDRVCGTIDIEKAL+E
Sbjct: 73   DPFNSSPSDPEMMSEEVRIRVDSQEPLSIVKKKVTMVDLPLGATEDRVCGTIDIEKALSE 132

Query: 597  GVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFIL 776
            GVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAA GWNTVEREGISI HPARF+L
Sbjct: 133  GVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAAGGWNTVEREGISIRHPARFVL 192

Query: 777  VGSGNPEEGELRPQLLDRFGMHAQIGTVKDPRLRVQIVSQRSTFDENPAAFRKDYEAGQM 956
            VGSGNPEEGELRPQLLDRFGMHA+I TV++P LRV+IV QR+ FD+NP  F   Y+  Q 
Sbjct: 193  VGSGNPEEGELRPQLLDRFGMHAEIRTVREPELRVKIVEQRTEFDQNPHPFCDQYQTEQE 252

Query: 957  ALTQRIVDARKLLKQGEVNYDFRVKISQICSDLNVDGIRGDIVTNRAAKALAAFEGRTEV 1136
            AL  +IV+A+ LL Q  ++YD+RVK+S++C++L+VDG+RGDIVTNRAAKALAAFEGRTEV
Sbjct: 253  ALQAKIVNAQNLLPQVTIDYDYRVKVSEVCAELDVDGLRGDIVTNRAAKALAAFEGRTEV 312

Query: 1137 TPEDIYRVIPLCLRHRLRKDPLAEIDDGDRVREIFKQVFGM 1259
            T +DI RVI LCLRHRLRKDPL  ID G +V ++FK+VFG+
Sbjct: 313  TVDDISRVIVLCLRHRLRKDPLESIDSGSKVEKVFKRVFGV 353



EST assemble image


clone accession position
1 HCL049f09_r AV642320 1 584
2 LCL062a07_r AV629617 80 516
3 MXL071c05_r BP097174 83 461
4 MXL012b06_r BP093695 85 251
5 MX245e03_r BP091869 91 618
6 MX241d03_r BP091585 92 618
7 LCL033h07_r AV627920 398 836
8 CM046h05_r AV388026 472 1028
9 CM048d11_r AV389102 542 793
10 CM074f02_r AV391514 719 1337
11 LC077a01_r AV624377 847 1392
12 MX206g02_r BP089410 923 1408
13 CM008c11_r AV386694 935 1397




Chlamydomonas reinhardtii
Kazusa DNA Research Institute