KCC000979A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC000979A_C01 KCC000979A_c01
GGGCTTGACCTGTCGCTCATCTGAAGCACCGTAGATACCTACTCCACCTGATACTGCGCA
TACCAGAGTACCTCGCTTGGGCGCCTCTTGACAACACTAGCTAAGATGAACGAAGTCGAG
GTCGAGCGGCAAATTGAGCAGATGGTGCGGTTCATCAAGCAGGAGGCGGAGGAGAAGTCC
AACGAGATTAAGGTCTCGGCTGAGGAGGAGTTTAACCTGGAGAAGCTGCAGCTGCTGGAG
CAGGAGAAGTCGAAGATTCGGAAGGAGTATGAGCGCAAAGAGGGCCAGGTTGAGGTGAAG
AAGAAGATCGAGTACTCCAAGCAGCTGAACGAGATGCGCCTCAAGGTGCTGGCTGCTAAG
GAGGCGGCGGTGCAGGACATCATCACTGACGCGAAAGCCCGTCTGCGTGATGTGTCCAAA
AACCCTTCCACCTACAAGAAGCTCCTTCAGGACCTGCTGGTGCAGGCCATGCGCAAGCTG
AATGAGAAGAGCGCTAGCGTGCGCGTGCGGCAAGTGGACCTGCTGCTGGTCAAGGAGGTG
GTGGAGCCGGCGCGCAAGGCGTACACGGCCATGTTTGGCACGGAGGCACCCGCGCTCACC
GTCGACCAAACCACCTTCCTTCCGCCTCCACCCACCGACGGCGACGAGGTGGAGTCCTGC
TGCGGCGGCGTGGTGCTGATCTCGGGCGACGGCCGCA
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000979A_C01 KCC000979A_c01
(697 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192853.1| H+-transporting ATPase chain E, vacuolar [Arabi... 194 1e-48
sp|Q9SWE7|VATE_CITLI Vacuolar ATP synthase subunit E (V-ATPase E... 194 1e-48
emb|CAA63086.1| V-type proton-ATPase [Arabidopsis thaliana] 192 4e-48
sp|Q9MB46|VATE_CITUN Vacuolar ATP synthase subunit E (V-ATPase E... 191 7e-48
dbj|BAB85263.1| putative YLP [Oryza sativa (japonica cultivar-gr... 189 3e-47
>ref|NP_192853.1| H+-transporting ATPase chain E, vacuolar [Arabidopsis thaliana]
gi|12643432|sp|Q39258|VATE_ARATH Vacuolar ATP synthase
subunit E (V-ATPase E subunit) (Vacuolar proton pump E
subunit) gi|7447322|pir||T01918 H+-exporting ATPase (EC
3.6.3.6) chain E, vacuolar - Arabidopsis thaliana
gi|3600058|gb|AAC35545.1| similar to vacuolar ATPases
[Arabidopsis thaliana] gi|4850294|emb|CAB43050.1|
H+-transporting ATPase chain E, vacuolar [Arabidopsis
thaliana] gi|7267814|emb|CAB81216.1| H+-transporting
ATPase chain E, vacuolar [Arabidopsis thaliana]
gi|17473677|gb|AAL38295.1| similar to vacuolar ATPases
[Arabidopsis thaliana] gi|20148607|gb|AAM10194.1|
similar to vacuolar ATPases [Arabidopsis thaliana]
Length = 230
Score = 194 bits (493), Expect = 1e-48
Identities = 104/198 (52%), Positives = 138/198 (69%), Gaps = 1/198 (0%)
Frame = +1
Query: 106 MNEVEVERQIEQMVRFIKQEAEEKSNEIKVSAEEEFNLEKLQLLEQEKSKIRKEYERKEG 285
MN+ +V RQI+QMVRFI+QEAEEK+NEI VSAEEEFN+EKLQL+E EK KIR++YE+KE
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 286 QVEVKKKIEYSKQLNEMRLKVLAAKEAAVQDIITDAKARLRDVSKNPSTYKKLLQDLLVQ 465
Q +V+KKI+YS QLN R+KVL A++ V + A L +VS++ YK+LL+DL+VQ
Sbjct: 61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
Query: 466 AMRKLNEKSASVRVRQVDLLLVKEVVEPARKAYTAMFGTEAPALTVDQTTFLPPPPTDGD 645
+ +L E S +R R+ DL LV+ V++ A++ Y AP + VD FLPPPP D
Sbjct: 121 CLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEYAGKAKVHAPEVAVDTKIFLPPPPKSND 180
Query: 646 -EVESCCGGVVLISGDGR 696
C GGVVL S DG+
Sbjct: 181 PHGLHCSGGVVLASRDGK 198
>sp|Q9SWE7|VATE_CITLI Vacuolar ATP synthase subunit E (V-ATPase E subunit) (Vacuolar
proton pump E subunit) (CLVE-1)
gi|5733660|gb|AAD49706.1| vacuolar V-H+ATPase subunit E
[Citrus limon]
Length = 230
Score = 194 bits (493), Expect = 1e-48
Identities = 102/198 (51%), Positives = 142/198 (71%), Gaps = 1/198 (0%)
Frame = +1
Query: 106 MNEVEVERQIEQMVRFIKQEAEEKSNEIKVSAEEEFNLEKLQLLEQEKSKIRKEYERKEG 285
MN+ +V +QI+QMVRFI+QEAEEK+NEI VSAEEEFN+EKLQL+E EK KIR+EYERKE
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
Query: 286 QVEVKKKIEYSKQLNEMRLKVLAAKEAAVQDIITDAKARLRDVSKNPSTYKKLLQDLLVQ 465
QVE++KKIEYS QLN R+KVL A++ V +++ A + +VS++ ++YKKLL+DL+VQ
Sbjct: 61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKDLIVQ 120
Query: 466 AMRKLNEKSASVRVRQVDLLLVKEVVEPARKAYTAMFGTEAPALTVDQTTFLPPPPTDGD 645
++ +L E + +R R+ D LV+ V+E A++ Y P + VD +LPP P +
Sbjct: 121 SLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGPGHHN 180
Query: 646 -EVESCCGGVVLISGDGR 696
SC GGVV+ S DG+
Sbjct: 181 AHGPSCSGGVVVASRDGK 198
>emb|CAA63086.1| V-type proton-ATPase [Arabidopsis thaliana]
Length = 230
Score = 192 bits (488), Expect = 4e-48
Identities = 103/198 (52%), Positives = 137/198 (69%), Gaps = 1/198 (0%)
Frame = +1
Query: 106 MNEVEVERQIEQMVRFIKQEAEEKSNEIKVSAEEEFNLEKLQLLEQEKSKIRKEYERKEG 285
MN+ +V RQI+QMVRFI+QEAEEK+NEI V AEEEFN+EKLQL+E EK KIR++YE+KE
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVPAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 286 QVEVKKKIEYSKQLNEMRLKVLAAKEAAVQDIITDAKARLRDVSKNPSTYKKLLQDLLVQ 465
Q +V+KKI+YS QLN R+KVL A++ V + A L +VS++ YK+LL+DL+VQ
Sbjct: 61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
Query: 466 AMRKLNEKSASVRVRQVDLLLVKEVVEPARKAYTAMFGTEAPALTVDQTTFLPPPPTDGD 645
+ +L E S +R R+ DL LV+ V++ A++ Y AP + VD FLPPPP D
Sbjct: 121 CLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEYAGKAKVHAPEVAVDTKIFLPPPPKSND 180
Query: 646 -EVESCCGGVVLISGDGR 696
C GGVVL S DG+
Sbjct: 181 PHGLHCSGGVVLASRDGK 198
>sp|Q9MB46|VATE_CITUN Vacuolar ATP synthase subunit E (V-ATPase E subunit) (Vacuolar
proton pump E subunit) gi|6729085|dbj|BAA89661.1|
vacuolar H+-ATPase E subunit-1 [Citrus unshiu]
Length = 230
Score = 191 bits (486), Expect = 7e-48
Identities = 101/198 (51%), Positives = 141/198 (71%), Gaps = 1/198 (0%)
Frame = +1
Query: 106 MNEVEVERQIEQMVRFIKQEAEEKSNEIKVSAEEEFNLEKLQLLEQEKSKIRKEYERKEG 285
MN+ +V +QI+QMVRFI+QEAEEK+NEI VSAEEEFN+EKLQL+E EK KIR+EYERKE
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
Query: 286 QVEVKKKIEYSKQLNEMRLKVLAAKEAAVQDIITDAKARLRDVSKNPSTYKKLLQDLLVQ 465
QVE++KKIEYS QLN R+KVL A++ V +++ A + +VS++ ++YKKLL+ L+VQ
Sbjct: 61 QVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQ 120
Query: 466 AMRKLNEKSASVRVRQVDLLLVKEVVEPARKAYTAMFGTEAPALTVDQTTFLPPPPTDGD 645
++ +L E + +R R+ D LV+ V+E A++ Y P + VD +LPP P +
Sbjct: 121 SLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGPGHHN 180
Query: 646 -EVESCCGGVVLISGDGR 696
SC GGVV+ S DG+
Sbjct: 181 AHGPSCSGGVVVASRDGK 198
>dbj|BAB85263.1| putative YLP [Oryza sativa (japonica cultivar-group)]
Length = 230
Score = 189 bits (481), Expect = 3e-47
Identities = 103/198 (52%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
Frame = +1
Query: 106 MNEVEVERQIEQMVRFIKQEAEEKSNEIKVSAEEEFNLEKLQLLEQEKSKIRKEYERKEG 285
MN+ +V +QI+QMVRFI+QEAEEK++EI VSAEEEFN+EKLQL+E EK KIR+EYERKE
Sbjct: 1 MNDADVAKQIQQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEK 60
Query: 286 QVEVKKKIEYSKQLNEMRLKVLAAKEAAVQDIITDAKARLRDVSKNPSTYKKLLQDLLVQ 465
QVEV+KKIEYS QLN R+KVL A++ V + DA +L VS N YK LL++L+VQ
Sbjct: 61 QVEVRKKIEYSMQLNASRIKVLQAQDDLVNSMKEDATKQLLRVSHNHHEYKNLLKELVVQ 120
Query: 466 AMRKLNEKSASVRVRQVDLLLVKEVVEPARKAYTAMFGTEAPALTVDQTTFLPPPPTDGD 645
+ +L E + +R R+ D V+ V+ A+ Y + P + VD +LPP P+ D
Sbjct: 121 GLLRLKEPAVLLRCRKEDHHHVESVLHSAKNEYASKAEVHHPEILVDHDVYLPPSPSSHD 180
Query: 646 EVES-CCGGVVLISGDGR 696
E C GGVVL S DG+
Sbjct: 181 SHERFCSGGVVLASRDGK 198
EST assemble image
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clone |
accession |
position |
| 1 |
LC065h08_r |
AV623584 |
1 |
628 |
| 2 |
LC100f07_r |
AV625980 |
90 |
498 |
| 3 |
LC032d12_r |
AV621188 |
91 |
635 |
| 4 |
HC003c02_r |
AV632045 |
97 |
570 |
| 5 |
LC044f12_r |
AV622074 |
100 |
638 |
| 6 |
LC032a05_r |
AV621153 |
100 |
636 |
| 7 |
MX004d09_r |
BP086221 |
101 |
499 |
| 8 |
LC091g12_r |
AV625384 |
102 |
469 |
| 9 |
LC098h04_r |
AV625852 |
103 |
503 |
| 10 |
LC029b01_r |
AV620951 |
104 |
611 |
| 11 |
LC012c05_r |
AV619724 |
105 |
347 |
| 12 |
CM061h07_r |
AV390624 |
108 |
456 |
| 13 |
CM040g01_r |
AV389156 |
113 |
663 |
| 14 |
CM033f04_r |
AV388380 |
113 |
662 |
| 15 |
LC065h04_r |
AV623580 |
113 |
615 |
| 16 |
LC020h07_r |
AV620350 |
114 |
615 |
| 17 |
LC010c06_r |
AV619576 |
114 |
636 |
| 18 |
HC053e09_r |
AV635975 |
114 |
553 |
| 19 |
HC041c01_r |
AV635045 |
120 |
234 |
| 20 |
CM008c07_r |
AV386718 |
120 |
670 |
| 21 |
LCL035c11_r |
AV628012 |
166 |
650 |
| 22 |
CM060d12_r |
AV390786 |
266 |
875 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute