KCC000975A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000975A_C01 KCC000975A_c01
gcacgagGCCATACCCAGCACATTAAAACACAAGCAAAGGCTTTGACCGCGCCTCCGTTC
TGTGCATCTCTACTTGACTCCAGAAACCCACCATGGCCGATGACTTTTACCTTCGATACT
ATGTAGGCCACAAGGGCAAATTCGGGCACGAGTTCTTGGAATTTGAGTTCAACAAGGATG
GGCGGCTGCGTTACGCTAACAACTCAAACTACAAGAACGACGAGATCATTACCCGTGAGG
TGTACGTGGGCCAGTCGGTGATTCAGGAGCTGAAGCGCATCGTGGAGGACAGTGAGATTC
TCAAGGAAGACGACAACAACTGGCCGGCGCCCGACCGCGTTGGGAGACAGGAGCTGGAGG
TGATCCAGGGTGGCCAGCACATCTCCTTCACCTGCACCAAGCTGGGCAGCGTGCTGCAGG
TGCAGAACAGCAAGGACCCGGACGGCCTGCGCATCTTCTACTACCTGGTGCAGGACATCA
AGTGCTTTGTGTTCTCGCTCATAAGCGCACACTTCAAGATCCAGCCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000975A_C01 KCC000975A_c01
         (527 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK08102.1|AF338343_1 mago nashi-like protein [Oryza sativa]       237  6e-62
gb|AAN76523.1|AF383945_1 MAGO protein [Gallus gallus]                 233  1e-60
dbj|BAB24516.2| unnamed protein product [Mus musculus]                231  3e-60
ref|NP_079840.1| RIKEN cDNA 2010012C16 [Mus musculus] gi|1284152...   231  4e-60
ref|NP_060518.1| hypothetical protein FLJ10292 [Homo sapiens] gi...   231  4e-60

>gb|AAK08102.1|AF338343_1 mago nashi-like protein [Oryza sativa]
          Length = 160

 Score =  237 bits (605), Expect = 6e-62
 Identities = 105/142 (73%), Positives = 128/142 (89%)
 Frame = +3

Query: 102 DFYLRYYVGHKGKFGHEFLEFEFNKDGRLRYANNSNYKNDEIITREVYVGQSVIQELKRI 281
           +FYLRYYVGHKGKFGHEFLEFEF  DG+LRYANNSNYKND +I +EV+V  SV++E +RI
Sbjct: 16  EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRI 75

Query: 282 VEDSEILKEDDNNWPAPDRVGRQELEVIQGGQHISFTCTKLGSVLQVQNSKDPDGLRIFY 461
           +++SEI+KEDDNNWP PDRVGRQELE++ G +HISFT +K+GS++ VQ SKDP+GLRIFY
Sbjct: 76  IQESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFY 135

Query: 462 YLVQDIKCFVFSLISAHFKIQP 527
           YLVQD+KCFVFSLI+ HFKI+P
Sbjct: 136 YLVQDLKCFVFSLINLHFKIKP 157

>gb|AAN76523.1|AF383945_1 MAGO protein [Gallus gallus]
          Length = 146

 Score =  233 bits (593), Expect = 1e-60
 Identities = 106/145 (73%), Positives = 125/145 (86%)
 Frame = +3

Query: 93  MADDFYLRYYVGHKGKFGHEFLEFEFNKDGRLRYANNSNYKNDEIITREVYVGQSVIQEL 272
           MA DFYLRYYVGHKGKFGHEFLEFEF  DG+LRYANNSNYKND +I +E YV +SV++EL
Sbjct: 1   MASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEEL 60

Query: 273 KRIVEDSEILKEDDNNWPAPDRVGRQELEVIQGGQHISFTCTKLGSVLQVQNSKDPDGLR 452
           KRI++DSEI KEDD  WP PDRVGRQELE++ G +HISFT +K+GS++ V  SKDP+GLR
Sbjct: 61  KRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLR 120

Query: 453 IFYYLVQDIKCFVFSLISAHFKIQP 527
           +FYYLVQD+KC VFSLI  HFKI+P
Sbjct: 121 VFYYLVQDLKCLVFSLIGLHFKIKP 145

>dbj|BAB24516.2| unnamed protein product [Mus musculus]
          Length = 148

 Score =  231 bits (590), Expect = 3e-60
 Identities = 105/146 (71%), Positives = 125/146 (84%)
 Frame = +3

Query: 90  TMADDFYLRYYVGHKGKFGHEFLEFEFNKDGRLRYANNSNYKNDEIITREVYVGQSVIQE 269
           +M  DFYLRYYVGHKGKFGHEFLEFEF  DG+LRYANNSNYKND +I +E YV +SV++E
Sbjct: 2   SMGSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEE 61

Query: 270 LKRIVEDSEILKEDDNNWPAPDRVGRQELEVIQGGQHISFTCTKLGSVLQVQNSKDPDGL 449
           LKRI++DSEI KEDD  WP PDRVGRQELE++ G +HISFT +K+GS++ V  SKDP+GL
Sbjct: 62  LKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGL 121

Query: 450 RIFYYLVQDIKCFVFSLISAHFKIQP 527
           R+FYYLVQD+KC VFSLI  HFKI+P
Sbjct: 122 RVFYYLVQDLKCLVFSLIGLHFKIKP 147

>ref|NP_079840.1| RIKEN cDNA 2010012C16 [Mus musculus] gi|12841527|dbj|BAB25244.1|
           unnamed protein product [Mus musculus]
           gi|12842242|dbj|BAB25528.1| unnamed protein product [Mus
           musculus] gi|12850597|dbj|BAB28784.1| unnamed protein
           product [Mus musculus] gi|20380277|gb|AAH27505.1| RIKEN
           cDNA 2010012C16 [Mus musculus]
          Length = 146

 Score =  231 bits (589), Expect = 4e-60
 Identities = 105/145 (72%), Positives = 124/145 (85%)
 Frame = +3

Query: 93  MADDFYLRYYVGHKGKFGHEFLEFEFNKDGRLRYANNSNYKNDEIITREVYVGQSVIQEL 272
           M  DFYLRYYVGHKGKFGHEFLEFEF  DG+LRYANNSNYKND +I +E YV +SV++EL
Sbjct: 1   MGSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEEL 60

Query: 273 KRIVEDSEILKEDDNNWPAPDRVGRQELEVIQGGQHISFTCTKLGSVLQVQNSKDPDGLR 452
           KRI++DSEI KEDD  WP PDRVGRQELE++ G +HISFT +K+GS++ V  SKDP+GLR
Sbjct: 61  KRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLR 120

Query: 453 IFYYLVQDIKCFVFSLISAHFKIQP 527
           +FYYLVQD+KC VFSLI  HFKI+P
Sbjct: 121 VFYYLVQDLKCLVFSLIGLHFKIKP 145

>ref|NP_060518.1| hypothetical protein FLJ10292 [Homo sapiens]
           gi|7022229|dbj|BAA91522.1| unnamed protein product [Homo
           sapiens] gi|9294743|gb|AAF86648.1|AF165518_1 MAGOH
           isoform [Homo sapiens] gi|10434283|dbj|BAB14202.1|
           unnamed protein product [Homo sapiens]
           gi|15012020|gb|AAH10905.1| FLJ10292 protein [Homo
           sapiens]
          Length = 148

 Score =  231 bits (589), Expect = 4e-60
 Identities = 105/145 (72%), Positives = 125/145 (85%)
 Frame = +3

Query: 93  MADDFYLRYYVGHKGKFGHEFLEFEFNKDGRLRYANNSNYKNDEIITREVYVGQSVIQEL 272
           +A DFYLRYYVGHKGKFGHEFLEFEF  DG+LRYANNSNYKND +I +E YV +SV++EL
Sbjct: 3   VASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEEL 62

Query: 273 KRIVEDSEILKEDDNNWPAPDRVGRQELEVIQGGQHISFTCTKLGSVLQVQNSKDPDGLR 452
           KRI++DSEI KEDD  WP PDRVGRQELE++ G +HISFT +K+GS++ V  SKDP+GLR
Sbjct: 63  KRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLR 122

Query: 453 IFYYLVQDIKCFVFSLISAHFKIQP 527
           +FYYLVQD+KC VFSLI  HFKI+P
Sbjct: 123 VFYYLVQDLKCLVFSLIGLHFKIKP 147



EST assemble image


clone accession position
1 CM007h01_r AV386791 1 527
2 MXL100f03_r BP098875 5 338




Chlamydomonas reinhardtii
Kazusa DNA Research Institute