Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000968A_C01 KCC000968A_c01
(751 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL79739.1|AC096687_3 putative ribosomal protein L18 [Oryza s... 137 2e-31
ref|NP_440654.1| 50S ribosomal protein L18 [Synechocystis sp. PC... 135 5e-31
ref|NP_680887.1| 50S ribosomal protein L18 [Thermosynechococcus ... 134 2e-30
ref|ZP_00074142.1| COG0256: Ribosomal protein L18 [Trichodesmium... 134 2e-30
ref|NP_175268.1| ribosomal protein L18p family [Arabidopsis thal... 133 3e-30
>gb|AAL79739.1|AC096687_3 putative ribosomal protein L18 [Oryza sativa]
Length = 170
Score = 137 bits (344), Expect = 2e-31
Identities = 73/139 (52%), Positives = 97/139 (69%), Gaps = 4/139 (2%)
Frame = +2
Query: 89 APTRPVSRAFTPVVCKA--ANKKASTQARHARLRKKLSGTTERPRMAVYKSNEHIYVQVI 262
+P++ RA VV K + +A ARH RLRKK+SGTTERPR++V++SN+H+Y QVI
Sbjct: 32 SPSQARRRASLVVVAKVKVSTPQADRIARHVRLRKKVSGTTERPRLSVFRSNKHLYAQVI 91
Query: 263 DDSKGHTLVSASTVMKDLKESLE--SGANINAATAVGKKVAELCKAHNIEKVCFDRGGFQ 436
DD+K TLVSAST+ K L + LE +G + A +G+ +A+ C I KV FDRGGF
Sbjct: 92 DDTKSCTLVSASTMHKSLSKDLEYSAGPTVEVAQKIGEVIAKSCLEKGITKVVFDRGGFL 151
Query: 437 YHGRIQAVAEAAREGGLVF 493
YHGRI+A+A+AARE GL F
Sbjct: 152 YHGRIKALADAARENGLDF 170
>ref|NP_440654.1| 50S ribosomal protein L18 [Synechocystis sp. PCC 6803]
gi|2500284|sp|P73305|RL18_SYNY3 50S ribosomal protein
L18 gi|7440915|pir||S77487 ribosomal protein L18 -
Synechocystis sp. (strain PCC 6803)
gi|1652412|dbj|BAA17334.1| 50S ribosomal protein L18
[Synechocystis sp. PCC 6803]
Length = 120
Score = 135 bits (341), Expect = 5e-31
Identities = 69/118 (58%), Positives = 88/118 (74%)
Frame = +2
Query: 140 ANKKASTQARHARLRKKLSGTTERPRMAVYKSNEHIYVQVIDDSKGHTLVSASTVMKDLK 319
+ +K++TQ RH RLR+ LSGT+ERPR+AV++SN+HIY QVIDD HTL +AST+ DLK
Sbjct: 3 STRKSATQRRHRRLRRHLSGTSERPRLAVFRSNDHIYAQVIDDVAQHTLAAASTLDPDLK 62
Query: 320 ESLESGANINAATAVGKKVAELCKAHNIEKVCFDRGGFQYHGRIQAVAEAAREGGLVF 493
+SL S A A+ VGK VA+ A I +V FDRGG YHGR++A+AEAARE GL F
Sbjct: 63 KSLSSTATQEASAEVGKLVAQRAIAKGINQVVFDRGGKLYHGRVKALAEAAREAGLNF 120
>ref|NP_680887.1| 50S ribosomal protein L18 [Thermosynechococcus elongatus BP-1]
gi|22293817|dbj|BAC07649.1| 50S ribosomal protein L18
[Thermosynechococcus elongatus BP-1]
Length = 120
Score = 134 bits (336), Expect = 2e-30
Identities = 62/116 (53%), Positives = 92/116 (78%)
Frame = +2
Query: 146 KKASTQARHARLRKKLSGTTERPRMAVYKSNEHIYVQVIDDSKGHTLVSASTVMKDLKES 325
+ A+ Q+RH R+R+K+ GT++RPR+AV++S++HIY QVIDD++ HTLV+AS++ +L++
Sbjct: 5 RTAARQSRHQRIRRKVKGTSDRPRLAVFRSHQHIYAQVIDDTRHHTLVAASSLEPELRQK 64
Query: 326 LESGANINAATAVGKKVAELCKAHNIEKVCFDRGGFQYHGRIQAVAEAAREGGLVF 493
L G+ A+ AVG+ +AE KA IE+V FDRGG YHGR++A+A+AAREGGL F
Sbjct: 65 LGKGSTCAASIAVGRLIAERAKAAGIERVVFDRGGNIYHGRVKALADAAREGGLDF 120
>ref|ZP_00074142.1| COG0256: Ribosomal protein L18 [Trichodesmium erythraeum IMS101]
Length = 120
Score = 134 bits (336), Expect = 2e-30
Identities = 65/116 (56%), Positives = 89/116 (76%)
Frame = +2
Query: 146 KKASTQARHARLRKKLSGTTERPRMAVYKSNEHIYVQVIDDSKGHTLVSASTVMKDLKES 325
+K S RH R+RKK+ GT+ERPR++V++SN HIY QVIDD+K HTLV+AST+ ++K +
Sbjct: 5 RKDSIIKRHRRVRKKVFGTSERPRLSVFRSNMHIYAQVIDDTKQHTLVAASTLEAEVKST 64
Query: 326 LESGANINAATAVGKKVAELCKAHNIEKVCFDRGGFQYHGRIQAVAEAAREGGLVF 493
++SGAN +A+ +GK +A+ IEKV FDRGG YHGR++A+AEAARE GL F
Sbjct: 65 IKSGANCDASIQIGKLIAQRSLEKGIEKVVFDRGGNLYHGRVKALAEAAREAGLDF 120
>ref|NP_175268.1| ribosomal protein L18p family [Arabidopsis thaliana]
gi|25295313|pir||E96523 hypothetical protein F11A17.10
[imported] - Arabidopsis thaliana
gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
Ribosomal protein L18 from Thermotoga maritima
gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
come from this gene. [Arabidopsis thaliana]
gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
protein L18 [Arabidopsis thaliana]
Length = 170
Score = 133 bits (335), Expect = 3e-30
Identities = 72/140 (51%), Positives = 93/140 (66%), Gaps = 4/140 (2%)
Frame = +2
Query: 86 LAPTRPVSRAFTPVVCKAANKKASTQ--ARHARLRKKLSGTTERPRMAVYKSNEHIYVQV 259
L P S +V +A K +S ARH+R+RKK++GTTERPR+ V++SN+H+YVQV
Sbjct: 31 LKPWSSSSLQSRSMVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQV 90
Query: 260 IDDSKGHTLVSASTVMKDLKESLE--SGANINAATAVGKKVAELCKAHNIEKVCFDRGGF 433
IDD+K HTL SAST K + E + SG I A VG+ +A+ C I KV FDRGG+
Sbjct: 91 IDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGY 150
Query: 434 QYHGRIQAVAEAAREGGLVF 493
YHGRI+A+A AARE GL F
Sbjct: 151 PYHGRIEALAAAAREHGLQF 170
