Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000966A_C01 KCC000966A_c01
(488 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
prf||2113367A HIC-1 gene 37 0.17
ref|XP_304304.1| hypothetical protein XP_304304 [Homo sapiens] 36 0.22
ref|NP_651560.1| CG6599-PA [Drosophila melanogaster] gi|23172430... 36 0.22
ref|ZP_00102109.1| COG0059: Ketol-acid reductoisomerase [Desulfi... 35 0.37
ref|NP_472073.1| similar to hypothetical proteins [Listeria inno... 34 0.83
>prf||2113367A HIC-1 gene
Length = 548
Score = 36.6 bits (83), Expect = 0.17
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = -3
Query: 483 AAAAASSSVPAAGR*PPRPRQQTASWTSRPASSRI*AATPQPCALATASSPAA*CRQP*R 304
AA AS++ G P RP ++W R A+ AA P ATA++ A R+P
Sbjct: 163 AAPPASAAKSVVGTRPSRPGGPRSAWRRRRATL---AAWTGPARAATATTTRAAARRPVA 219
Query: 303 TLSPAAPNGRQLVTFQQCCLDVNAVTTSKSRGENGFGAAPAAKGHAS---LNRYV 148
+PA P G + A +S G+N + P KG S LN +V
Sbjct: 220 ARTPAPPGGH----LEGYPCPHLAYGEPESFGDNLYVCIPCGKGFPSSEQLNAHV 270
>ref|XP_304304.1| hypothetical protein XP_304304 [Homo sapiens]
Length = 262
Score = 36.2 bits (82), Expect = 0.22
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 77 CLFTRLLASKAHEN*SSKTPKQYLTYRLREAW---PFAAGAAPNPFSPRDFEVVTAFTSK 247
C LL S+ H +K PKQ+L+ EAW PF P PF P F + FT +
Sbjct: 166 CRLPPLLDSRQHNIFQTKRPKQFLSRHFPEAWKHLPFF--CLPAPFHPESFSRLGPFTDE 223
>ref|NP_651560.1| CG6599-PA [Drosophila melanogaster] gi|23172430|gb|AAF56703.2|
CG6599-PA [Drosophila melanogaster]
Length = 1183
Score = 36.2 bits (82), Expect = 0.22
Identities = 25/77 (32%), Positives = 37/77 (47%), Gaps = 7/77 (9%)
Frame = +1
Query: 259 KCHKLATVRRRRRQRPLRLATSSCRAGSSRKCARLWRRCSNT*ARRPRSPARCLLT--WT 432
K +L V RR ++R LR TSSC +C+ + R SN RR +S R + W
Sbjct: 498 KEQRLRHVCRRHKRRQLRRRTSSCGESKHERCSEICRSKSNIEIRRRKSRERYASSSEWE 557
Query: 433 RRSS-----SCSWH*RR 468
S+ +C +H R+
Sbjct: 558 EESAEDSCENCCYHKRQ 574
>ref|ZP_00102109.1| COG0059: Ketol-acid reductoisomerase [Desulfitobacterium hafniense]
Length = 316
Score = 35.4 bits (80), Expect = 0.37
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 LLKCHKLATVRRRRRQRPLRLATSSCRAGSSRKCARLWRRCSNT*ARRPRSPARCLLT-W 429
+ + H+ + R R A +S R+CAR W R + SP+ T
Sbjct: 234 ITRMHEFISXDRPXTARLXPAAATSSTTTPRRRCARCWPRSRTALSPSSGSPSTPRATPT 293
Query: 430 TRRSSSCSWH*RRCRSSRA 486
TRRSS+ +W R RS+R+
Sbjct: 294 TRRSSAATWSTRSKRSARS 312
>ref|NP_472073.1| similar to hypothetical proteins [Listeria innocua]
gi|25514213|pir||AB1775 hypothetical protein homolog
lin2744 [imported] - Listeria innocua (strain Clip11262)
gi|16415280|emb|CAC97970.1| lin2744 [Listeria innocua]
Length = 1334
Score = 34.3 bits (77), Expect = 0.83
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 1/111 (0%)
Frame = -1
Query: 488 LARLLRHLLQCQLQEDDLLVHVSKQRAGLLGLRAHVFE-QRRHSLAHLRLLPARQLDVAN 312
L LL H C++ + L ++ R L AHV E +R++LA L QL N
Sbjct: 1208 LVTLLHHAANCEVSDGKSLDYIESNREMFAELLAHVSEFAKRYTLAEANLNKINQLFEQN 1267
Query: 311 LSGRCRRRRRTVASL*HFNNAA*T*MPSQLQSRAGRTGLERRRRQRATPLL 159
G + ++ L FN M + + T +ER+R LL
Sbjct: 1268 KEGDIKAIAQSFVDLMAFNA-----MGAPASFKFFETTIERKRYNNLKELL 1313
