Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000961A_C01 KCC000961A_c01
(530 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175683.1| histone H2A, putative [Arabidopsis thaliana] gi... 205 3e-52
gb|AAN06860.1| Putative histone H2A [Oryza sativa (japonica cult... 204 8e-52
emb|CAC84677.1| putative histone H2A [Pinus pinaster] 202 2e-51
ref|NP_191019.1| histone H2A.F/Z [Arabidopsis thaliana] gi|11275... 202 3e-51
gb|AAM08789.1|AC016780_19 Putative histone H2A [Oryza sativa] gi... 201 4e-51
>ref|NP_175683.1| histone H2A, putative [Arabidopsis thaliana]
gi|25294263|pir||D96568 probable histone H2A,
14481-15293 [imported] - Arabidopsis thaliana
gi|12324629|gb|AAG52265.1|AC019018_2 putative histone
H2A; 14481-15293 [Arabidopsis thaliana]
gi|15450954|gb|AAK96748.1| putative histone H2A
[Arabidopsis thaliana] gi|16648742|gb|AAL25563.1|
At1g52740/F14G24_1 [Arabidopsis thaliana]
gi|17978701|gb|AAL47344.1| putative histone H2A
[Arabidopsis thaliana] gi|21536635|gb|AAM60967.1|
putative histone H2A [Arabidopsis thaliana]
Length = 134
Score = 205 bits (522), Expect = 3e-52
Identities = 108/137 (78%), Positives = 119/137 (86%)
Frame = +2
Query: 80 MSGKGAKGLSGKGAKGTMGDKLKGDKRKPTSRSQKAGLQFPVGRIHRLLKSRVTANGRVG 259
MSGKGAKGL G+ DK DK+KP +RS +AGLQFPVGR+HRLLK+R TA+GRVG
Sbjct: 1 MSGKGAKGLIMGKPSGSDKDK---DKKKPITRSSRAGLQFPVGRVHRLLKTRSTAHGRVG 57
Query: 260 ATSAVYAAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGG 439
AT+AVY AAILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEELDTLIK TIAGG
Sbjct: 58 ATAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDTLIKGTIAGG 117
Query: 440 GVIPHIHKSLISKQQKK 490
GVIPHIHKSLI+K K+
Sbjct: 118 GVIPHIHKSLINKSAKE 134
>gb|AAN06860.1| Putative histone H2A [Oryza sativa (japonica cultivar-group)]
Length = 138
Score = 204 bits (518), Expect = 8e-52
Identities = 107/138 (77%), Positives = 117/138 (84%), Gaps = 1/138 (0%)
Frame = +2
Query: 80 MSGKGAKGL-SGKGAKGTMGDKLKGDKRKPTSRSQKAGLQFPVGRIHRLLKSRVTANGRV 256
M+GKG KGL + K DK K K+ P SRS +AGLQFPVGRIHR LKSR +A+GRV
Sbjct: 1 MAGKGGKGLLAAKTTAAKSADKDKDKKKAPVSRSSRAGLQFPVGRIHRQLKSRASAHGRV 60
Query: 257 GATSAVYAAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIAG 436
GAT+AVY+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIK TIAG
Sbjct: 61 GATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAG 120
Query: 437 GGVIPHIHKSLISKQQKK 490
GGVIPHIHKSLI+K K+
Sbjct: 121 GGVIPHIHKSLINKTSKE 138
>emb|CAC84677.1| putative histone H2A [Pinus pinaster]
Length = 139
Score = 202 bits (515), Expect = 2e-51
Identities = 109/138 (78%), Positives = 119/138 (85%), Gaps = 2/138 (1%)
Frame = +2
Query: 80 MSGKGAKGL-SGKGAKGTMGDKLKG-DKRKPTSRSQKAGLQFPVGRIHRLLKSRVTANGR 253
MSGKGAKGL GK + + K DK+KP SRS +AGLQFPVGRIHRLLKSR++ANGR
Sbjct: 1 MSGKGAKGLLMGKSSAPVNNNNNKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRISANGR 60
Query: 254 VGATSAVYAAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIA 433
VGAT+AVY+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIK TIA
Sbjct: 61 VGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIA 120
Query: 434 GGGVIPHIHKSLISKQQK 487
GGV+ HIHKSLI+K K
Sbjct: 121 VGGVVFHIHKSLINKSSK 138
>ref|NP_191019.1| histone H2A.F/Z [Arabidopsis thaliana] gi|11275239|pir||T47615
histone H2A.F/Z - Arabidopsis thaliana
gi|2407800|emb|CAA73155.1| histone H2A.F/Z [Arabidopsis
thaliana] gi|7258359|emb|CAB77576.1| histone H2A.F/Z
[Arabidopsis thaliana] gi|21592838|gb|AAM64788.1|
histone H2A.F/Z [Arabidopsis thaliana]
gi|28950691|gb|AAO63269.1| At3g54560 [Arabidopsis
thaliana]
Length = 136
Score = 202 bits (513), Expect = 3e-51
Identities = 106/137 (77%), Positives = 117/137 (85%)
Frame = +2
Query: 80 MSGKGAKGLSGKGAKGTMGDKLKGDKRKPTSRSQKAGLQFPVGRIHRLLKSRVTANGRVG 259
M+GKG KGL DK K DK+KP SRS +AG+QFPVGRIHR LK+RV+A+GRVG
Sbjct: 1 MAGKGGKGLVAAKTMAANKDKDK-DKKKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVG 59
Query: 260 ATSAVYAAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIAGG 439
AT+AVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIK TIAGG
Sbjct: 60 ATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGG 119
Query: 440 GVIPHIHKSLISKQQKK 490
GVIPHIHKSLI+K K+
Sbjct: 120 GVIPHIHKSLINKTTKE 136
>gb|AAM08789.1|AC016780_19 Putative histone H2A [Oryza sativa] gi|31432099|gb|AAP53784.1|
putative histone H2A [Oryza sativa (japonica
cultivar-group)]
Length = 139
Score = 201 bits (512), Expect = 4e-51
Identities = 107/139 (76%), Positives = 116/139 (82%), Gaps = 2/139 (1%)
Frame = +2
Query: 80 MSGKGAKGL--SGKGAKGTMGDKLKGDKRKPTSRSQKAGLQFPVGRIHRLLKSRVTANGR 253
M+GKG KGL + A DK K K+ P SRS +AG+QFPVGRIHR LK RV+ANGR
Sbjct: 1 MAGKGGKGLLAAKTTAAKAAADKDKDRKKAPVSRSSRAGIQFPVGRIHRQLKGRVSANGR 60
Query: 254 VGATSAVYAAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKATIA 433
VGAT+AVY AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIK TIA
Sbjct: 61 VGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIA 120
Query: 434 GGGVIPHIHKSLISKQQKK 490
GGGVIPHIHKSLI+K K+
Sbjct: 121 GGGVIPHIHKSLINKTAKE 139
