Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000960A_C01 KCC000960A_c01
(460 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_326954.1| hypothetical protein [Neurospora crassa] gi|289... 35 0.40
gb|AAP79291.1| nkx2-1 [Saccoglossus kowalevskii] 35 0.52
ref|XP_330701.1| predicted protein [Neurospora crassa] gi|289261... 35 0.52
ref|ZP_00128215.1| COG0726: Predicted xylanase/chitin deacetylas... 34 0.68
ref|NP_492226.1| abnormal cell LINeage LIN-10, amyloid beta prec... 34 0.68
>ref|XP_326954.1| hypothetical protein [Neurospora crassa] gi|28922447|gb|EAA31679.1|
hypothetical protein [Neurospora crassa]
gi|28950117|emb|CAD70897.1| conserved hypothetical
protein [Neurospora crassa]
Length = 689
Score = 35.0 bits (79), Expect = 0.40
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 394 TAVSSKFQPVSTASRRPAASSSYLVQALKVFAFSSSVSPQPASPVRPCRNQR 239
TA S + +P S +S+RPA SS Q+L PQP SP+ P Q+
Sbjct: 366 TANSQQERPASQSSQRPAERSSR--QSLSALEIQQQEPPQPDSPLSPAEEQQ 415
>gb|AAP79291.1| nkx2-1 [Saccoglossus kowalevskii]
Length = 393
Score = 34.7 bits (78), Expect = 0.52
Identities = 28/88 (31%), Positives = 42/88 (46%), Gaps = 1/88 (1%)
Frame = -3
Query: 434 PSMQQCPSNITRVHSSLLQISASQHGIPT-TSSIVVIPRPSFESVCFQFQCEPPACQPRQ 258
P+ QQ P N++ + ++AS PT TSSI I P+ Q Q +PPA Q +Q
Sbjct: 266 PTTQQQPQNMSTNSTLSTTVNASNTANPTNTSSIPGITTPTQHHQQQQQQLQPPAAQQQQ 325
Query: 257 ALPQSALIRQDASILRFGPVVSSRVSPN 174
Q + GP ++S V+P+
Sbjct: 326 QQQQQH---------QTGPDITSVVNPS 344
>ref|XP_330701.1| predicted protein [Neurospora crassa] gi|28926199|gb|EAA35182.1|
predicted protein [Neurospora crassa]
Length = 444
Score = 34.7 bits (78), Expect = 0.52
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = -1
Query: 436 PHPCNSVPVTSHGFTAVSSKFQPVSTASRRPAASSSYLVQALKVFAFSSSVSPQPASPVR 257
PHP P + +S P S + +AS + + +K+F+ + SP P+S
Sbjct: 239 PHPATRTPNPQRTYDTSASMLTPTSRGNTTTSASEAGATKRVKLFSDTRGPSPPPSSTTT 298
Query: 256 PCRNQR*SVKMHQYYGLVL*SAHASVPTIGPLPRTAIHDTTEP 128
+ S + Q G ++ + PT G + R TT P
Sbjct: 299 TTKLTT-STNLSQTQG----RSYQTTPTGGGIGRPTTTTTTGP 336
>ref|ZP_00128215.1| COG0726: Predicted xylanase/chitin deacetylase [Pseudomonas
syringae pv. syringae B728a]
Length = 355
Score = 34.3 bits (77), Expect = 0.68
Identities = 23/75 (30%), Positives = 36/75 (47%), Gaps = 4/75 (5%)
Frame = +1
Query: 172 WLG--LTRELTTGPNRSIDAS*RINADCGRA*RGWQAGGSHWN*KQTLSKLGRGMTTMLL 345
W G + R+L R++DA I GWQA HW+ +Q +++ RG+ +
Sbjct: 142 WPGKPIGRDLGPLMRRALDAGHEIGLHAWDH-HGWQANAGHWSDRQLTAQIHRGVDCLSD 200
Query: 346 VVGMP--C*LAEIWR 384
++G P C A WR
Sbjct: 201 ILGHPVVCSAAAGWR 215
>ref|NP_492226.1| abnormal cell LINeage LIN-10, amyloid beta precursor
protein-binding family A-like, controls cell polarity
(102.3 kD) (lin-10) [Caenorhabditis elegans]
gi|4581979|emb|CAB40208.1| lin-10 protein
[Caenorhabditis elegans] gi|14530340|emb|CAC42256.1| C.
elegans LIN-10 protein (corresponding sequence C09H6.2b)
[Caenorhabditis elegans]
Length = 954
Score = 34.3 bits (77), Expect = 0.68
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 299 FQFQCEPPACQPRQALPQSALIRQDASILR--FGPVVSSRVSPNHRAVTP 156
F Q +P QPR + S+ R + R G VVSS VSPNHR V P
Sbjct: 114 FPMQFQPALQQPRPSSQASSSHRSEDDNGRQTAGSVVSSNVSPNHREVRP 163
