Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000956A_C01 KCC000956A_c01
(567 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays] 40 0.017
gb|AAM44363.1| hypothetical protein [Dictyostelium discoideum] g... 39 0.064
ref|NP_196462.2| expressed protein [Arabidopsis thaliana] gi|306... 37 0.14
emb|CAC08345.1| putative protein [Arabidopsis thaliana] 37 0.14
dbj|BAC04906.1| unnamed protein product [Homo sapiens] 37 0.14
>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
Length = 274
Score = 40.4 bits (93), Expect = 0.017
Identities = 39/128 (30%), Positives = 51/128 (39%), Gaps = 9/128 (7%)
Frame = +2
Query: 149 ALPPPSDSGSWPIAR--PMRTLTHIRSQSVTKPPIHHPPSTKISNPNYTSHTCSPRTILE 322
A P S + P + P T T R+ S + P P +++ S P+ S T + T
Sbjct: 14 ATPSTSTAAGTPTSACSPTATSTSTRTSSASTAPTACPGTSRGSRPSPCSSTATSSTSAP 73
Query: 323 WRQLPPHTLTRSK------ARP*AGCRGAWPPAAPTPCR*GCRRGSRAGRSSWRCP-PRP 481
R+ P T T + A P A CR P P PCR RCP P P
Sbjct: 74 GRR-PRGTTTSTAWSSPWTASPCASCREPTPRGRPAPCR--------------RCPSPAP 118
Query: 482 ARRTCPAS 505
AR T +S
Sbjct: 119 ARPTACSS 126
>gb|AAM44363.1| hypothetical protein [Dictyostelium discoideum]
gi|28828387|gb|AAM09303.2| similar to Plasmodium
lophurae. Histidine-rich glycoprotein precursor
[Dictyostelium discoideum]
Length = 233
Score = 38.5 bits (88), Expect = 0.064
Identities = 20/52 (38%), Positives = 22/52 (41%)
Frame = +1
Query: 196 HAHTNAHPLSVRHEAAHPPPTIHKNFQPKLHKPHMLSSNHPGMATTTTPHPH 351
H H + HP H HP P +H N P H PH HP PHPH
Sbjct: 154 HPHHHPHP----HPHPHPHPHLHPNPHPHPH-PHPHPHPHPHHHPNPNPHPH 200
Score = 35.4 bits (80), Expect = 0.55
Identities = 19/53 (35%), Positives = 22/53 (40%)
Frame = +1
Query: 193 PHAHTNAHPLSVRHEAAHPPPTIHKNFQPKLHKPHMLSSNHPGMATTTTPHPH 351
PH H + HP H HP P H + P PH +HP PHPH
Sbjct: 159 PHPHPHPHP----HPHLHPNPHPHPHPHP---HPHPHPHHHPNPNPHPHPHPH 204
Score = 35.0 bits (79), Expect = 0.71
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +1
Query: 193 PHAHTNAHPLSVRHEAAHPPPTIHKNFQPKLHKPHMLSSNHPGMATTTTPHPH 351
PH H N HP H HP P H N P H PH PHPH
Sbjct: 169 PHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPH-PH--------------PHPH 206
>ref|NP_196462.2| expressed protein [Arabidopsis thaliana]
gi|30682392|ref|NP_851033.1| expressed protein
[Arabidopsis thaliana] gi|20259547|gb|AAM13893.1|
unknown protein [Arabidopsis thaliana]
gi|21689693|gb|AAM67468.1| unknown protein [Arabidopsis
thaliana]
Length = 918
Score = 37.4 bits (85), Expect = 0.14
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 193 PHAHTNAHPLSVRHEAAHPPPTIHKNFQPKLHKPHMLSSNHPGMATTTTPHPHT 354
PH + ++P S PP +H N Q P S + P PHPH+
Sbjct: 26 PHEDSGSYPKSPHQPVTPPPAQVHHNHQQPHQHPQSQSQSQPQPHLQALPHPHS 79
>emb|CAC08345.1| putative protein [Arabidopsis thaliana]
Length = 917
Score = 37.4 bits (85), Expect = 0.14
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 193 PHAHTNAHPLSVRHEAAHPPPTIHKNFQPKLHKPHMLSSNHPGMATTTTPHPHT 354
PH + ++P S PP +H N Q P S + P PHPH+
Sbjct: 26 PHEDSGSYPKSPHQPVTPPPAQVHHNHQQPHQHPQSQSQSQPQPHLQALPHPHS 79
>dbj|BAC04906.1| unnamed protein product [Homo sapiens]
Length = 226
Score = 37.4 bits (85), Expect = 0.14
Identities = 28/106 (26%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Frame = +1
Query: 64 HGARPLRRGPHAACTPPLQHLRHTRAHLRASAAV*FWLLADRAPHAHTNAHPLS------ 225
H P P + + HT +H A H T+ HPL+
Sbjct: 106 HSNTPTHTHPLTSTHIQTSTVTHTHSHTHAHKHT--------YTHTSTHTHPLTFTHTYP 157
Query: 226 VRHEAAHPPPTIHKNFQPKLHK---PHMLSSNHPGMATTTTPHPHT 354
+ H H P H + H HM S HP T+T HPHT
Sbjct: 158 ITHPLTHTPTHTHTHALTHSHTHIHTHMHSHTHPLTHTSTHTHPHT 203
Score = 34.7 bits (78), Expect = 0.93
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 193 PHAHTNAHPLSVRHEAAHPPPTIHKNFQPKLHKPHMLSSNHPGMATTTTPHPHT 354
PH ++ HPL++ H +H P H H LS +P T HPHT
Sbjct: 14 PHPLSHTHPLTLTHIHSHTHPLTHS---------HPLSHTYPLTLTHIHTHPHT 58
Score = 32.3 bits (72), Expect = 4.6
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +1
Query: 175 LLADRAPHAHTNAHPLSVRHEAAHPPPTIHKNFQPKLHKPHMLSSNHPGMATTTTPHPHT 354
LL H+ T+AH S H +H IH N H L+S H +T T H HT
Sbjct: 77 LLTHIHSHSFTHAHMHSHTHIHSHTHSHIHSNTPTHTHP---LTSTHIQTSTVTHTHSHT 133
