KCC000952A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000952A_C01 KCC000952A_c01
ATAAATTAACCAAAGCGTGGCGTGGCCATCAAATATTTGAAGGTCTCTGACTCTCGCGCC
AAAACACGCACATACACACACGCTAGAATCAATAAATGGTTGTGGTGCTGGCTCCTCCGG
GGCTATTGAGCGCTGCCAAGTTGGGCAGCGGTCTCGCCCAAGCCATTCCTCTTGGCGCGG
TCACGCCTGCCGGGTGCGCGGCCTCGACAGCTGCCTACTCCGCATCTTCACAACTGGTTG
ACGAATGCTGCGCGTTTCGGAGCTCGGCTGGCGTGAGTGGTTCAGGCCGGGGAGCTCTCG
TTGTCATCGCTCGCGGAGGGACCCACGCACCCCCTCGCTCCGGCACCAAGGCCGCTGCAT
CTCGCTGGCTGGAGTATGTGGTCACCAAGCCCAAGCTCCGCAAGCGGCGGAGAGGTGGTC
GCGGTCATGATGAGAGCGATGGCGACAGTGGAGACGACGGCAGCGGTTTCGGGGGCAGCG
GAGGCAACTGGGGCAACGGAGGCCACGGGGACTGGAGCTCCTACAGCGGnGGTGACGCAT
TCGGGCAATGGGCCCAGTACGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000952A_C01 KCC000952A_c01
         (562 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_335539.1| PE_PGRS family protein [Mycobacterium tuberculo...    50  2e-05
ref|NP_854752.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis sub...    50  2e-05
ref|NP_855128.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis sub...    50  3e-05
ref|NP_215957.1| PE_PGRS [Mycobacterium tuberculosis H37Rv] gi|7...    50  3e-05
ref|NP_194775.1| glycine-rich protein [Arabidopsis thaliana] gi|...    48  8e-05

>ref|NP_335539.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
           gi|13880677|gb|AAK45353.1| PE_PGRS family protein
           [Mycobacterium tuberculosis CDC1551]
          Length = 533

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 44/142 (30%), Positives = 57/142 (39%), Gaps = 2/142 (1%)
 Frame = +3

Query: 120 GLLSAAKLGSGLAQAIPLGAVTPAGCAASTAAYSASSQLVDECCAFRSSAGVSGSGRGAL 299
           G L  +    G   A P GA+   G A        S+ L     A    AG +G   GA 
Sbjct: 189 GWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGSAGLFGNGGA--GGAGGAGGQGGAG 246

Query: 300 VVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGDSGDDGS--GFG 473
           +  A G       +G    A  W+              GG+G D   G+ GD G+  G G
Sbjct: 247 IGGADGTKGGDAGAGGAGGAGGWIHGHGGVGG--DGGTGGQGGDGVQGEPGDTGAAGGAG 304

Query: 474 GSGGNWGNGGHGDWSSYSGGDA 539
           G+GG  G+GG   W S +GGDA
Sbjct: 305 GAGGRGGDGGSAGWLSGNGGDA 326

 Score = 36.6 bits (83), Expect = 0.24
 Identities = 20/46 (43%), Positives = 23/46 (49%), Gaps = 2/46 (4%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGS--GFGGSGGNWGNGGHGDWSSYSGGDAFG 545
           GG GH    G SG      G GGSGG  G+GG+G   + SG    G
Sbjct: 431 GGNGHAGGAGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGSGAKGNG 476

 Score = 35.8 bits (81), Expect = 0.41
 Identities = 33/102 (32%), Positives = 39/102 (37%), Gaps = 5/102 (4%)
 Frame = +3

Query: 267 AGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGD 446
           AG SG   G L     GGT     +G   A S                 G +G+  + GD
Sbjct: 439 AGGSGGTAGLLGSGGSGGTGGDGGNGGLGAGS-----------------GAKGNGGNGGD 481

Query: 447 SGDDGS----GFGGSGGNWGNGGHGDWSSYSG-GDAFGQWAQ 557
            G  G     G GG+GGN G GG G     +G G A G   Q
Sbjct: 482 GGKGGDAQLIGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQ 523

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 18/41 (43%), Positives = 23/41 (55%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHGDWSSYSGGD 536
           GG G       +G +G G GG+G N G GG+G W   SGG+
Sbjct: 158 GGTGGSAGLIGNGGNG-GAGGAGANGGAGGNGGWLYGSGGN 197

 Score = 33.1 bits (74), Expect = 2.6
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNG--GHGDWSSYSGGDA 539
           GG G     G +G  G G G  GG  GNG  GH   +  SGG A
Sbjct: 403 GGAGGAGGMGSTGGTGGGGGFGGGTGGNGGNGHAGGAGGSGGTA 446

 Score = 32.3 bits (72), Expect = 4.5
 Identities = 15/32 (46%), Positives = 19/32 (58%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHG 509
           GG G   ++G +G +G    GSGGN G GG G
Sbjct: 173 GGAGGAGANGGAGGNGGWLYGSGGNGGAGGAG 204

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFG---GSGGNWGNGGHGDWSSYSGGDAFG 545
           GG+G D  +  +G  G       G GG  G GG G      GG  FG
Sbjct: 378 GGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFG 424

>ref|NP_854752.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis subsp. bovis AF2122/97]
           gi|31617847|emb|CAD93957.1| PE-PGRS FAMILY PROTEIN
           [Mycobacterium bovis subsp. bovis AF2122/97]
          Length = 763

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 44/142 (30%), Positives = 57/142 (39%), Gaps = 2/142 (1%)
 Frame = +3

Query: 120 GLLSAAKLGSGLAQAIPLGAVTPAGCAASTAAYSASSQLVDECCAFRSSAGVSGSGRGAL 299
           G L  +    G   A P GA+   G A        S+ L     A    AG +G   GA 
Sbjct: 183 GWLYGSGGNGGAGGAGPAGAIGAPGVAGGAGGAGGSAGLFGNGGA--GGAGGAGGQGGAG 240

Query: 300 VVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGDSGDDGS--GFG 473
           +  A G       +G    A  W+              GG+G D   G+ GD G+  G G
Sbjct: 241 IGGADGTKGGDAGAGGAGGAGGWIHGHGGVGG--DGGTGGQGGDGVQGEPGDTGAAGGAG 298

Query: 474 GSGGNWGNGGHGDWSSYSGGDA 539
           G+GG  G+GG   W S +GGDA
Sbjct: 299 GAGGRGGDGGSAGWLSGNGGDA 320

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 31/94 (32%), Positives = 36/94 (37%), Gaps = 2/94 (2%)
 Frame = +3

Query: 270 GVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGDS 449
           G  G+G  A ++   GG      SG   A                  RGG G   S    
Sbjct: 514 GAGGTGGDAGLLYGNGGAGGTGGSGGAGA------------------RGGDGGAGSGTAQ 555

Query: 450 GDDGS--GFGGSGGNWGNGGHGDWSSYSGGDAFG 545
           G DG   G GG+ GN GNGG   W S +GG   G
Sbjct: 556 GGDGGAGGVGGNAGNGGNGGSAGWLSGNGGTGGG 589

 Score = 37.4 bits (85), Expect = 0.14
 Identities = 30/93 (32%), Positives = 43/93 (45%), Gaps = 5/93 (5%)
 Frame = +3

Query: 267 AGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGD 446
           AG  G+G    ++   GG  A    G   AA +     +  P L   + G  G+  S G+
Sbjct: 405 AGAGGTGGDGGLLYGNGG--AGGNGGNGGAAGKG---GIGAPGLSTAQGGDGGNGGSGGN 459

Query: 447 SGDDGSGFGGS-----GGNWGNGGHGDWSSYSG 530
           +G+ G+G  GS     GGN G+GG G   + SG
Sbjct: 460 AGNGGNGGRGSVLFGHGGNAGHGGAGGNGAVSG 492

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 31/102 (30%), Positives = 40/102 (38%), Gaps = 5/102 (4%)
 Frame = +3

Query: 267 AGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGD 446
           AG +G   G   ++  GGT     +G   A S                 G +G+  + GD
Sbjct: 669 AGGAGGSGGTAGLLGSGGTGGDGGNGGLGAGS-----------------GAKGNGGNGGD 711

Query: 447 SGDDGS----GFGGSGGNWGNGGHGDWSSYSG-GDAFGQWAQ 557
            G  G     G GG+GGN G GG G     +G G A G   Q
Sbjct: 712 GGKGGDAQLIGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQ 753

 Score = 35.8 bits (81), Expect = 0.41
 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGS--GFGGSGGNWGNGGHGDWSSYSGGDAFG 545
           GG GH    G SG      G GG+GG+ GNGG G  S   G    G
Sbjct: 664 GGNGHAGGAGGSGGTAGLLGSGGTGGDGGNGGLGAGSGAKGNGGNG 709

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 29/95 (30%), Positives = 39/95 (40%), Gaps = 1/95 (1%)
 Frame = +3

Query: 264 SAGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLR-KRRRGGRGHDESD 440
           +AG  G+G     +   GG      +G   AA        T+  +  K   GG G     
Sbjct: 350 TAGGGGNGGRGAALFGHGGNAGHGGAGGNGAAGG--NGADTQLGISGKGGTGGGGGGAGA 407

Query: 441 GDSGDDGSGFGGSGGNWGNGGHGDWSSYSGGDAFG 545
           G +G DG    G+GG  GNGG+G  +   G  A G
Sbjct: 408 GGTGGDGGLLYGNGGAGGNGGNGGAAGKGGIGAPG 442

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 18/41 (43%), Positives = 23/41 (55%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHGDWSSYSGGD 536
           GG G       +G +G G GG+G N G GG+G W   SGG+
Sbjct: 152 GGTGGSAGLIGNGGNG-GAGGAGANGGAGGNGGWLYGSGGN 191

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
 Frame = +3

Query: 264 SAGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDG 443
           +AG  G+G    V+   GG      +G   A S      +T     K   GG G   + G
Sbjct: 459 NAGNGGNGGRGSVLFGHGGNAGHGGAGGNGAVSGNGGSSITAVG-GKGGTGGGGGGGAGG 517

Query: 444 DSGDDG-----SGFGGSGGNWGNGGHGDWSSYSGGDAFG 545
             GD G      G GG+GG+ G G  G       G A G
Sbjct: 518 TGGDAGLLYGNGGAGGTGGSGGAGARGGDGGAGSGTAQG 556

 Score = 33.1 bits (74), Expect = 2.6
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNG--GHGDWSSYSGGDA 539
           GG G     G +G  G G G  GG  GNG  GH   +  SGG A
Sbjct: 636 GGAGGAGGMGSTGGTGGGGGFGGGTGGNGGNGHAGGAGGSGGTA 679

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 16/60 (26%)
 Frame = +3

Query: 414 GGRGHDESD-----GDSGDDGSGFGGS-----------GGNWGNGGHGDWSSYSGGDAFG 545
           GGRG D        G+ GD G+G GG            GGN GNGG G  +   G    G
Sbjct: 301 GGRGGDGGSAGWLSGNGGDAGTGGGGGNAGAGGEGGIFGGNGGNGGTGGTAGGGGNGGRG 360

 Score = 32.3 bits (72), Expect = 4.5
 Identities = 15/32 (46%), Positives = 19/32 (58%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHG 509
           GG G   ++G +G +G    GSGGN G GG G
Sbjct: 167 GGAGGAGANGGAGGNGGWLYGSGGNGGAGGAG 198

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHGDWSSYSGGDA 539
           GG G     G +G  G+   G GGN G+GG G   +  G  A
Sbjct: 345 GGTGGTAGGGGNGGRGAALFGHGGNAGHGGAGGNGAAGGNGA 386

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFG---GSGGNWGNGGHGDWSSYSGGDAFG 545
           GG+G D  +  +G  G       G GG  G GG G      GG  FG
Sbjct: 611 GGQGADTGNAGNGGHGGSAAKLFGDGGAGGAGGMGSTGGTGGGGGFG 657

>ref|NP_855128.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis subsp. bovis AF2122/97]
           gi|31618225|emb|CAD96143.1| PE-PGRS FAMILY PROTEIN
           [Mycobacterium bovis subsp. bovis AF2122/97]
          Length = 491

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 28/94 (29%), Positives = 42/94 (43%)
 Frame = +3

Query: 264 SAGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDG 443
           + GV G+G  + + I  G +     +G          Y+ +     +   GG G + + G
Sbjct: 370 NGGVGGTGGASALTIGNGSSAGAGGAGGAGGTGGTGGYIESLDGKGQAGNGGNGGNGAAG 429

Query: 444 DSGDDGSGFGGSGGNWGNGGHGDWSSYSGGDAFG 545
            +G  G+G GG+GG  GNGG G  S   G   FG
Sbjct: 430 GAGGGGTGAGGNGGAGGNGGDGGPSQGGGNPGFG 463

 Score = 35.0 bits (79), Expect = 0.69
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHGDWSSYSGG 533
           GG G        G   +G GG+GG+ G GG+G  SS  GG
Sbjct: 324 GGAGGTGGTAGIGGSSAGAGGAGGDGGAGGNGGGSSMIGG 363

 Score = 34.7 bits (78), Expect = 0.90
 Identities = 30/93 (32%), Positives = 35/93 (37%)
 Frame = +3

Query: 267 AGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGD 446
           AG +G   GA      GG    P SG   A                  RGG G + + G 
Sbjct: 249 AGGTGGDGGA------GGAGDSPNSGANGA------------------RGGDGGNGAAGG 284

Query: 447 SGDDGSGFGGSGGNWGNGGHGDWSSYSGGDAFG 545
           +G    G GG+GGN G  G G      GG A G
Sbjct: 285 AGGRLFGNGGAGGNGGTAGQGG----DGGTALG 313

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHG 509
           GG G D   G +G   S  GG GG  GNGG G
Sbjct: 343 GGAGGDGGAGGNGGGSSMIGGKGGTGGNGGVG 374

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 3/125 (2%)
 Frame = +3

Query: 144 GSGLAQAIPLGAVTPAGCA-ASTAAYSASSQLVDECCAFRSSAGVSGSGRGALVVIARGG 320
           G+G A A+ +G  + AG   A  A  +  +    E    +  AG  G+G       A GG
Sbjct: 375 GTGGASALTIGNGSSAGAGGAGGAGGTGGTGGYIESLDGKGQAGNGGNGGNGAAGGAGGG 434

Query: 321 THAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGDSGDDGS--GFGGSGGNWG 494
                  GT A  +                 GG G +  DG     G   GFGG GG  G
Sbjct: 435 -------GTGAGGN-----------------GGAGGNGGDGGPSQGGGNPGFGGDGGTGG 470

Query: 495 NGGHG 509
            GG G
Sbjct: 471 PGGVG 475

 Score = 32.3 bits (72), Expect = 4.5
 Identities = 18/46 (39%), Positives = 23/46 (49%), Gaps = 6/46 (13%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGS------GFGGSGGNWGNGGHGDWSSYSGG 533
           G RG D  +G +G  G       G GG+GG  G GG G  +  +GG
Sbjct: 271 GARGGDGGNGAAGGAGGRLFGNGGAGGNGGTAGQGGDGGTALGAGG 316

 Score = 32.3 bits (72), Expect = 4.5
 Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 7/47 (14%)
 Frame = +3

Query: 414 GGRGHDESD-GDSGDDGSGF------GGSGGNWGNGGHGDWSSYSGG 533
           GG G D    G+ G  G+G+      G +GG  G GG G W S +GG
Sbjct: 157 GGNGGDAGMFGNGGAGGAGYSPAAGTGAAGGAGGAGGAGGWLSGNGG 203

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGS-----GFGGSGGNWGNGGHGDWSSYSGGDA 539
           G  G+  + G  GD G+     G GG GG  G GG G  +   G  A
Sbjct: 294 GAGGNGGTAGQGGDGGTALGAGGIGGDGGTGGAGGTGGTAGIGGSSA 340

>ref|NP_215957.1| PE_PGRS [Mycobacterium tuberculosis H37Rv] gi|7476135|pir||D70916
           hypothetical glycine-rich protein Rv1441c -
           Mycobacterium tuberculosis (strain H37RV)
           gi|2131055|emb|CAB09265.1| PE_PGRS [Mycobacterium
           tuberculosis H37Rv]
          Length = 491

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 28/94 (29%), Positives = 42/94 (43%)
 Frame = +3

Query: 264 SAGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDG 443
           + GV G+G  + + I  G +     +G          Y+ +     +   GG G + + G
Sbjct: 370 NGGVGGTGGASALTIGNGSSAGAGGAGGAGGTGGTGGYIESLDGKGQAGNGGNGGNGAAG 429

Query: 444 DSGDDGSGFGGSGGNWGNGGHGDWSSYSGGDAFG 545
            +G  G+G GG+GG  GNGG G  S   G   FG
Sbjct: 430 GAGGGGTGAGGNGGAGGNGGDGGPSQGGGNPGFG 463

 Score = 34.7 bits (78), Expect = 0.90
 Identities = 30/93 (32%), Positives = 35/93 (37%)
 Frame = +3

Query: 267 AGVSGSGRGALVVIARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGD 446
           AG +G   GA      GG    P SG   A                  RGG G + + G 
Sbjct: 249 AGGTGGDGGA------GGAGDSPNSGANGA------------------RGGDGGNGAAGG 284

Query: 447 SGDDGSGFGGSGGNWGNGGHGDWSSYSGGDAFG 545
           +G    G GG+GGN G  G G      GG A G
Sbjct: 285 AGGRLFGNGGAGGNGGTAGQGG----DGGTALG 313

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHG 509
           GG G D   G +G   S  GG GG  GNGG G
Sbjct: 343 GGAGGDGGAGGTGGGSSMIGGKGGTGGNGGVG 374

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 17/40 (42%), Positives = 20/40 (49%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHGDWSSYSGG 533
           GG G        G   +G GG+GG+ G GG G  SS  GG
Sbjct: 324 GGAGGTGGTAGIGGSSAGAGGAGGDGGAGGTGGGSSMIGG 363

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 3/125 (2%)
 Frame = +3

Query: 144 GSGLAQAIPLGAVTPAGCA-ASTAAYSASSQLVDECCAFRSSAGVSGSGRGALVVIARGG 320
           G+G A A+ +G  + AG   A  A  +  +    E    +  AG  G+G       A GG
Sbjct: 375 GTGGASALTIGNGSSAGAGGAGGAGGTGGTGGYIESLDGKGQAGNGGNGGNGAAGGAGGG 434

Query: 321 THAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGDSGDDGS--GFGGSGGNWG 494
                  GT A  +                 GG G +  DG     G   GFGG GG  G
Sbjct: 435 -------GTGAGGN-----------------GGAGGNGGDGGPSQGGGNPGFGGDGGTGG 470

Query: 495 NGGHG 509
            GG G
Sbjct: 471 PGGVG 475

 Score = 32.3 bits (72), Expect = 4.5
 Identities = 18/46 (39%), Positives = 23/46 (49%), Gaps = 6/46 (13%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGS------GFGGSGGNWGNGGHGDWSSYSGG 533
           G RG D  +G +G  G       G GG+GG  G GG G  +  +GG
Sbjct: 271 GARGGDGGNGAAGGAGGRLFGNGGAGGNGGTAGQGGDGGTALGAGG 316

 Score = 32.3 bits (72), Expect = 4.5
 Identities = 19/47 (40%), Positives = 24/47 (50%), Gaps = 7/47 (14%)
 Frame = +3

Query: 414 GGRGHDESD-GDSGDDGSGF------GGSGGNWGNGGHGDWSSYSGG 533
           GG G D    G+ G  G+G+      G +GG  G GG G W S +GG
Sbjct: 157 GGNGGDAGMFGNGGAGGAGYSPAAGTGAAGGAGGAGGAGGWLSGNGG 203

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGSGFGGSGGNWGNGGHGDWSSYSG 530
           GG G     G  G    G GG GG+ G GG G     +G
Sbjct: 296 GGNGGTAGQGGDGGTALGAGGIGGDGGTGGAGGTGGTAG 334

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +3

Query: 414 GGRGHDESDGDSGDDGS-----GFGGSGGNWGNGGHGDWSSYSGGDA 539
           G  G+  + G  GD G+     G GG GG  G GG G  +   G  A
Sbjct: 294 GAGGNGGTAGQGGDGGTALGAGGIGGDGGTGGAGGTGGTAGIGGSSA 340

>ref|NP_194775.1| glycine-rich protein [Arabidopsis thaliana] gi|25296175|pir||C85356
           glycine-rich protein [imported] - Arabidopsis thaliana
           gi|7269947|emb|CAB79764.1| glycine-rich protein
           [Arabidopsis thaliana] gi|20260352|gb|AAM13074.1|
           unknown protein [Arabidopsis thaliana]
           gi|23197766|gb|AAN15410.1| unknown protein [Arabidopsis
           thaliana]
          Length = 162

 Score = 48.1 bits (113), Expect = 8e-05
 Identities = 36/140 (25%), Positives = 51/140 (35%)
 Frame = +3

Query: 126 LSAAKLGSGLAQAIPLGAVTPAGCAASTAAYSASSQLVDECCAFRSSAGVSGSGRGALVV 305
           L    +G+G+   I +G     G  +   A S S        +  SS+  S SG G    
Sbjct: 35  LDLGGIGAGIGIGIGIGG---GGSGSGAGAGSGSGGGGSSSSSSSSSSSSSSSGGGGGDA 91

Query: 306 IARGGTHAPPRSGTKAAASRWLEYVVTKPKLRKRRRGGRGHDESDGDSGDDGSGFGGSGG 485
            +  G++A   +G+ +                   R G G     G  G  G G GG GG
Sbjct: 92  GSEAGSYAGSHAGSGSGG-----------------RSGSGRGRGSGGGGGHGGGGGGGGG 134

Query: 486 NWGNGGHGDWSSYSGGDAFG 545
             G GG G+   Y  G  +G
Sbjct: 135 RGGGGGSGNGEGYGEGGGYG 154



EST assemble image


clone accession position
1 MX030h03_r BP087287 1 478
2 LC001g06_r AV618948 79 610
3 LC022e06_r AV620466 95 636
4 LC097f09_r AV625773 108 554
5 CM039b12_r AV388929 115 670
6 HC046d10_r AV635446 115 581
7 MX248d02_r BP092014 131 415
8 CM005f04_r AV386871 144 533
9 MX221f11_r BP090296 358 574




Chlamydomonas reinhardtii
Kazusa DNA Research Institute