KCC000950A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000950A_C01 KCC000950A_c01
GTACATCCGGCGCCGCGCCATCCGGCACTTGCAGGAGCGCCGCGTGGTCATCTTTGGCGC
CGGCACCGGCAACCCCTTCTTCACAACCGACACGGCGGCGGCGCTGCGGGCGGCGGAGAT
GAACGCGGACGTGTTCATGAAGGCGACTAAGGTGGACGGCGTGTACGACTGCGACCCCAT
GAAGAACAGCCACGCCAAGAAGTACGACAAGCTGTCGTACCGGCAGGTGTCGCTGGATGG
TCTGGAGGTGATGGACGAGACGGCCATCACGCTGTGCAAGGAGAACAACATCCCCGTGCT
CGTATTCAACGTCATGGAGCGCGGCAACGTGCTGAGGGCAGCGCAGGGCCACAGCGTGGG
CACTGTGGTGGAGGGATTCTAAGCAGCCAGGCGCGAGAGCTGGAGCAGCAGCTGGAGTGG
TCAGGAGTAGCAGCTGGAGCGGCCAGGAGCGGTGGCTGGACCTGCGTCGGGGGCAACAAT
GTGTGGATAAACATCCTTCGGCGGAAAGAGTGGAAGTTGTAGAGGCCGCGGTTCCGTTGG
CGGAGGTGGTAGAGCGCGGCTTCGATGCCCTGTCCGCTAGTTCGGGTCACGGCCAGTGGC
GTCATGCGCTGTTGGGGCGCGGCGTCATGGCGGCGTCATGCGCAGTTGGGGCGCACGGAC
AGGGATGGGGAGGTCTCCTGCGCATGCAGCAAGCGGCAAAGCTGCGGCTCGTGTGTGGGA
GCGCGTGTGCGTGTACCGGTATGTTGTGCCAGCACATTGACGTGCCGCCAGCACTCAGAC
CGGGGAGCGCTCCTGTGACCCTGTGAGTGCTGAATGCGAGAGCCCGCTTGTGAGTGCGAG
CCGGAGAGCAGGCAGACCACATTTTGAAGATATACTCCGGACTGTCATGGCTCGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000950A_C01 KCC000950A_c01
         (895 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00072557.1| COG0528: Uridylate kinase [Trichodesmium eryt...   175  8e-43
ref|NP_892640.1| uridylate kinase [Prochlorococcus marinus subsp...   169  4e-41
ref|NP_485250.1| uridylate kinase [Nostoc sp. PCC 7120] gi|22653...   169  8e-41
ref|ZP_00107991.1| COG0528: Uridylate kinase [Nostoc punctiforme]     167  2e-40
ref|NP_188498.1| aspartate/glutamate/uridylate kinase family [Ar...   167  2e-40

>ref|ZP_00072557.1| COG0528: Uridylate kinase [Trichodesmium erythraeum IMS101]
          Length = 244

 Score =  175 bits (444), Expect = 8e-43
 Identities = 84/131 (64%), Positives = 102/131 (77%)
 Frame = +2

Query: 2   YIRRRAIRHLQERRVVIFGAGTGNPFFTTDTAAALRAAEMNADVFMKATKVDGVYDCDPM 181
           YIRRRAIRHL++ RVV+FGAG+GNPFFTTDT AALRAAE+ A+V  KATKVDGVYD DP 
Sbjct: 113 YIRRRAIRHLEKGRVVVFGAGSGNPFFTTDTTAALRAAEIEAEVIFKATKVDGVYDSDPH 172

Query: 182 KNSHAKKYDKLSYRQVSLDGLEVMDETAITLCKENNIPVLVFNVMERGNVLRAAQGHSVG 361
           KN  AK+Y+ LSY +V    L VMD TAI LCKENNIP++VFN+   GN+ +A  G  +G
Sbjct: 173 KNQEAKRYESLSYGEVLTLDLRVMDSTAIALCKENNIPIIVFNLSVSGNICKAVMGEKIG 232

Query: 362 TVVEGF*AARR 394
           T+V GF  ++R
Sbjct: 233 TIVGGFHESKR 243

>ref|NP_892640.1| uridylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1378] gi|33639811|emb|CAE18981.1| uridylate kinase
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 234

 Score =  169 bits (429), Expect = 4e-41
 Identities = 79/123 (64%), Positives = 100/123 (81%)
 Frame = +2

Query: 2   YIRRRAIRHLQERRVVIFGAGTGNPFFTTDTAAALRAAEMNADVFMKATKVDGVYDCDPM 181
           YIRRRA+RHL++ RVV+FG G GNPFFTTDT AALRAAE+NA+V MKATKVDGVYD DP 
Sbjct: 111 YIRRRAMRHLEKGRVVVFGGGCGNPFFTTDTTAALRAAEINAEVVMKATKVDGVYDRDPN 170

Query: 182 KNSHAKKYDKLSYRQVSLDGLEVMDETAITLCKENNIPVLVFNVMERGNVLRAAQGHSVG 361
           K   AKKY  L+Y+QV  D + VMD TAI LCK+NNIP++VF++ ++GN+ RA  G S+G
Sbjct: 171 KFKEAKKYSSLTYQQVLSDEIAVMDSTAIALCKDNNIPIMVFDIFKKGNISRAVAGESIG 230

Query: 362 TVV 370
           +++
Sbjct: 231 SLI 233

>ref|NP_485250.1| uridylate kinase [Nostoc sp. PCC 7120]
           gi|22653986|sp|Q8YXK5|PYRH_ANASP Uridylate kinase (UK)
           (Uridine monophosphate kinase) (UMP kinase)
           gi|25314424|pir||AD1957 uridylate kinase [imported] -
           Nostoc sp. (strain PCC 7120) gi|17130554|dbj|BAB73164.1|
           uridylate kinase [Nostoc sp. PCC 7120]
          Length = 242

 Score =  169 bits (427), Expect = 8e-41
 Identities = 83/125 (66%), Positives = 99/125 (78%)
 Frame = +2

Query: 2   YIRRRAIRHLQERRVVIFGAGTGNPFFTTDTAAALRAAEMNADVFMKATKVDGVYDCDPM 181
           YIRRRAIRHL++ RVVIFGAG+GNPFFTTDT AALRAAE++A+V  KATKVDGVYD DP 
Sbjct: 113 YIRRRAIRHLEKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPE 172

Query: 182 KNSHAKKYDKLSYRQVSLDGLEVMDETAITLCKENNIPVLVFNVMERGNVLRAAQGHSVG 361
              +AK+Y+ L+Y  V    L VMD TAI LCKENNIP+LVF++  RGN+ RA  G S+G
Sbjct: 173 IYPNAKRYNSLTYAHVLAQDLRVMDSTAIALCKENNIPILVFDLTTRGNIRRAVLGESIG 232

Query: 362 TVVEG 376
           T+V G
Sbjct: 233 TLVGG 237

>ref|ZP_00107991.1| COG0528: Uridylate kinase [Nostoc punctiforme]
          Length = 242

 Score =  167 bits (424), Expect = 2e-40
 Identities = 83/125 (66%), Positives = 99/125 (78%)
 Frame = +2

Query: 2   YIRRRAIRHLQERRVVIFGAGTGNPFFTTDTAAALRAAEMNADVFMKATKVDGVYDCDPM 181
           YIRRRAIRHL++ RVVIFGAG+GNPFFTTDT AALRAAE++A+V  KATKVDGVYD DP 
Sbjct: 113 YIRRRAIRHLEKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDADPE 172

Query: 182 KNSHAKKYDKLSYRQVSLDGLEVMDETAITLCKENNIPVLVFNVMERGNVLRAAQGHSVG 361
              +AK+Y+ L+Y  V    L VMD TAI LCKENNIP+LVF++  RGN+ RA  G S+G
Sbjct: 173 IYPNAKRYNSLTYAHVLAKDLRVMDSTAIALCKENNIPILVFDLTVRGNIHRAVLGESIG 232

Query: 362 TVVEG 376
           T+V G
Sbjct: 233 TLVGG 237

>ref|NP_188498.1| aspartate/glutamate/uridylate kinase family [Arabidopsis thaliana]
           gi|9293891|dbj|BAB01794.1| contains similarity to
           uridylate kinase~gene_id:MVE11.4 [Arabidopsis thaliana]
           gi|15292789|gb|AAK92763.1| putative uridylate kinase
           [Arabidopsis thaliana] gi|20258857|gb|AAM14100.1|
           putative uridylate kinase [Arabidopsis thaliana]
          Length = 339

 Score =  167 bits (424), Expect = 2e-40
 Identities = 81/125 (64%), Positives = 102/125 (80%)
 Frame = +2

Query: 2   YIRRRAIRHLQERRVVIFGAGTGNPFFTTDTAAALRAAEMNADVFMKATKVDGVYDCDPM 181
           YIRRRAIRHL++ RVVIF AGTGNPFFTTDTAAALR AE+NA+V +KAT VDGV+D DP 
Sbjct: 205 YIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPK 264

Query: 182 KNSHAKKYDKLSYRQVSLDGLEVMDETAITLCKENNIPVLVFNVMERGNVLRAAQGHSVG 361
           +N +A+  D L+Y++V+   L VMD TAITLC+ENNIPV+VFN+ E GN+ +A +G  VG
Sbjct: 265 RNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNIAKAIKGERVG 324

Query: 362 TVVEG 376
           T++ G
Sbjct: 325 TLIGG 329



EST assemble image


clone accession position
1 MX234b02_r BP091124 1 488
2 CM005e05_r AV386872 355 748
3 MXL071g08_r BP097206 627 1000




Chlamydomonas reinhardtii
Kazusa DNA Research Institute