KCC000949A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000949A_C01 KCC000949A_c01
tcgagttttttttttttTTTTTTTGATCTTTGGGCGTTACATTATTACTTGGATCCGCCC
TCGGTATGCAACCGGTCCCTGTAGTGGATGTCCCACCACTTACAGAGCCTACCTTTAGCA
CAAGAGCTGCACACGAATCACTCTGCCCTCTGTCGCTCATCCACTCGCTCGCAGCATCAC
TCACACAGCATGTAGTAGAACACAACCAAGCCACACTGCATTCAACCTGGCCCCTGCGCT
CACGTCGGCGCACACACGATAGACCAGCCGAATAACTGTTTCGAGTCCCGAATCGCAGCT
GAGAAATTATTCTACCAGCGCTATTTTGCCAACCCTCCATGCCGACATCCCACGACGGCT
CCACTCCTGCCACTGTCACTCCAACCCGCCGCTTCACACAACACATCCAGCCGCTCCCTG
GCAACCTCCATCACCAGCGCCTGGCCTGATGCATGCCTCTCCACGCAAAGAGACGCTTAC
TGGCCAGCCACGGTCTTGACCCACATGGACAGGGTATCCACGTCGCGGCGCTCGCTGGGG
TACTTGATCACCTGCTTGCTGTTGGGCGGCaggtagacgatggtggggaaggtcttgagc
tgtaggttctcgttgcagaactcgcggctcgatctcggcctggtacttgg


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000949A_C01 KCC000949A_c01
         (650 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM18118.1|AF498290_1 5'-adenylylsulfate reductase [Chlamydom...   104  1e-21
emb|CAD22096.1| adenosine 5' phosphosulfate reductase [Physcomit...    57  2e-07
emb|CAA04611.1| APS reductase [Brassica juncea]                        54  3e-06
gb|AAC49561.1| PRH19 [Arabidopsis thaliana]                            53  4e-06
ref|NP_192370.1| 5'-adenylylsulfate reductase [Arabidopsis thali...    53  4e-06

>gb|AAM18118.1|AF498290_1 5'-adenylylsulfate reductase [Chlamydomonas reinhardtii]
          Length = 413

 Score =  104 bits (260), Expect = 1e-21
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = -1

Query: 626 REFCNENLQLKTFPTIVYLPPNSKQVIKYPSERRDVDTLSMWVKTVAGQ 480
           REFCNENLQLKTFPTIVYLPPNSKQVIKYPSERRDVDTLSMWVKTVAGQ
Sbjct: 365 REFCNENLQLKTFPTIVYLPPNSKQVIKYPSERRDVDTLSMWVKTVAGQ 413

>emb|CAD22096.1| adenosine 5' phosphosulfate reductase [Physcomitrella patens]
          Length = 465

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 23/48 (47%), Positives = 37/48 (76%)
 Frame = -1

Query: 632 SSREFCNENLQLKTFPTIVYLPPNSKQVIKYPSERRDVDTLSMWVKTV 489
           + + +  ENLQL+++PT+++LP NS Q+IKYPSE R+VD L  +V+ +
Sbjct: 417 AQKAYAKENLQLQSYPTVLFLPKNSSQIIKYPSENREVDALLGFVQAL 464

>emb|CAA04611.1| APS reductase [Brassica juncea]
          Length = 464

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = -1

Query: 626 REFCNENLQLKTFPTIVYLPPNSKQVIKYPSERRDVDTLSMWVKTV 489
           +EF    LQL +FPTI+  P NS + IKYPSE+RDVD+L+ ++  V
Sbjct: 418 KEFAKRELQLGSFPTILVFPKNSSRPIKYPSEKRDVDSLTSFLNLV 463

>gb|AAC49561.1| PRH19 [Arabidopsis thaliana]
          Length = 465

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -1

Query: 626 REFCNENLQLKTFPTIVYLPPNSKQVIKYPSERRDVDTLSMWVKTV 489
           +EF  + LQL +FPTI+  P NS + IKYPSE+RDV++L+ ++  V
Sbjct: 419 KEFAKQELQLGSFPTILVFPKNSSRPIKYPSEKRDVESLTSFLNLV 464

>ref|NP_192370.1| 5'-adenylylsulfate reductase [Arabidopsis thaliana]
           gi|24211445|sp|P92979|APR1_ARATH 5'-adenylylsulfate
           reductase 1, chloroplast precursor (Adenosine
           5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 1)
           (APS sulfotransferase 1) (Thioredoxin independent APS
           reductase 1) (3'-phosphoadenosine-5'-phosphosulfate
           reductase homolog 19) (PAPS reductase homolog 19)
           (Prh-19) gi|25288822|pir||B85058 5'-adenylylsulfate
           reductase [imported] - Arabidopsis thaliana
           gi|2738756|gb|AAC26979.1| 5'-adenylylsulfate reductase
           [Arabidopsis thaliana]
           gi|4773905|gb|AAD29775.1|AF074021_7 5'-adenylylsulfate
           reductase [Arabidopsis thaliana]
           gi|7267219|emb|CAB80826.1| 5'-adenylylsulfate reductase
           [Arabidopsis thaliana]
           gi|15983416|gb|AAL11576.1|AF424582_1 AT4g04610/F4H6_13
           [Arabidopsis thaliana] gi|27363218|gb|AAO11528.1|
           At4g04610/F4H6_13 [Arabidopsis thaliana]
          Length = 465

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = -1

Query: 626 REFCNENLQLKTFPTIVYLPPNSKQVIKYPSERRDVDTLSMWVKTV 489
           +EF  + LQL +FPTI+  P NS + IKYPSE+RDV++L+ ++  V
Sbjct: 419 KEFAKQELQLGSFPTILVFPKNSSRPIKYPSEKRDVESLTSFLNLV 464



EST assemble image


clone accession position
1 CM028g08_r AV387736 1 600
2 CM005a01_r AV386848 12 567
3 HCL076c04_r AV643796 160 651




Chlamydomonas reinhardtii
Kazusa DNA Research Institute