Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000948A_C01 KCC000948A_c01
(700 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563687.1| photosystem II protein family [Arabidopsis thal... 87 4e-19
ref|NP_441782.1| photosystem II 11 kD protein [Synechocystis sp.... 60 2e-08
sp|P74367|PS11_SYNY3 Photosystem II 11 kDa protein precursor gi|... 60 2e-08
ref|ZP_00072822.1| hypothetical protein [Trichodesmium erythraeu... 58 2e-07
ref|NP_683253.1| photosystem II 11 kD protein [Thermosynechococc... 57 2e-07
>ref|NP_563687.1| photosystem II protein family [Arabidopsis thaliana]
gi|7485907|pir||T00900 hypothetical protein F21B7.14 -
Arabidopsis thaliana gi|9280647|gb|AAF86516.1|AC002560_9
F21B7.21 [Arabidopsis thaliana]
gi|13899089|gb|AAK48966.1|AF370539_1 Unknown protein
[Arabidopsis thaliana] gi|14994277|gb|AAK73273.1|
Unknown protein [Arabidopsis thaliana]
gi|21386971|gb|AAM47889.1| unknown protein [Arabidopsis
thaliana] gi|21536786|gb|AAM61118.1| unknown
[Arabidopsis thaliana]
Length = 174
Score = 86.7 bits (213), Expect(2) = 4e-19
Identities = 41/81 (50%), Positives = 57/81 (69%)
Frame = +1
Query: 223 DTYTAETSAILDKVKVTLALDKDDPAKEDSVKGLRKDINNWVAKYRREPKVSGKPSFGNT 402
+ Y +TSA++ KV+ TL++ K DP D+V LR+ N+WVAKYR+E + GK SF +
Sbjct: 72 EEYIKDTSAVISKVRSTLSMQKTDPNVADAVAELREASNSWVAKYRKEKALLGKASFRDI 131
Query: 403 YSALNALAGHFNSFGATRPHP 465
YSALNA++GH+ SFG T P P
Sbjct: 132 YSALNAVSGHYVSFGPTAPIP 152
Score = 30.4 bits (67), Expect(2) = 4e-19
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 449 PPAPIPKKRLERLQKELDDATLLLTRNR 532
P APIP KR R+ +E++ A LTR R
Sbjct: 147 PTAPIPAKRKARILEEMETAEKALTRGR 174
>ref|NP_441782.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|7469475|pir||S76203 hypothetical protein -
Synechocystis sp. (strain PCC 6803)
gi|1653549|dbj|BAA18462.1| photosystem II 11 kD protein
[Synechocystis sp. PCC 6803]
Length = 135
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 29/90 (32%), Positives = 53/90 (58%)
Frame = +1
Query: 202 DDNTALFDTYTAETSAILDKVKVTLALDKDDPAKEDSVKGLRKDINNWVAKYRREPKVSG 381
D T L Y+ +T ++ ++ + L +D P +++ R IN+++++YRR+ G
Sbjct: 27 DSGTGLTGNYSQDTLTVIATLREAIDLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 86
Query: 382 KPSFGNTYSALNALAGHFNSFGATRPHPQE 471
SF +ALN+LAG++ S+GA RP P++
Sbjct: 87 LKSFTTMQTALNSLAGYYTSYGA-RPIPEK 115
Score = 20.8 bits (42), Expect(2) = 2e-08
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 458 PIPKKRLERLQKELDDATLLLTR 526
PIP+K +RLQ E A + R
Sbjct: 111 PIPEKLKKRLQLEFTQAERSIER 133
>sp|P74367|PS11_SYNY3 Photosystem II 11 kDa protein precursor gi|1183848|dbj|BAA11640.1|
11 kDa protein of photosystem II [Synechocystis sp.]
Length = 134
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 29/90 (32%), Positives = 53/90 (58%)
Frame = +1
Query: 202 DDNTALFDTYTAETSAILDKVKVTLALDKDDPAKEDSVKGLRKDINNWVAKYRREPKVSG 381
D T L Y+ +T ++ ++ + L +D P +++ R IN+++++YRR+ G
Sbjct: 26 DSGTGLTGNYSQDTLTVIATLREAIDLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 85
Query: 382 KPSFGNTYSALNALAGHFNSFGATRPHPQE 471
SF +ALN+LAG++ S+GA RP P++
Sbjct: 86 LKSFTTMQTALNSLAGYYTSYGA-RPIPEK 114
Score = 20.8 bits (42), Expect(2) = 2e-08
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 458 PIPKKRLERLQKELDDATLLLTR 526
PIP+K +RLQ E A + R
Sbjct: 110 PIPEKLKKRLQLEFTQAERSIER 132
>ref|ZP_00072822.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 131
Score = 57.8 bits (138), Expect = 2e-07
Identities = 31/98 (31%), Positives = 60/98 (60%)
Frame = +1
Query: 178 AHAIFGFADDNTALFDTYTAETSAILDKVKVTLALDKDDPAKEDSVKGLRKDINNWVAKY 357
A + G ++ +T L Y+ +T ++++ +K + L ++ AK ++ R+ IN++ ++Y
Sbjct: 16 AIGLMGCSNPST-LSGNYSEDTLSLINSLKTAIELPENTEAKSEAQAIARQAINDYASRY 74
Query: 358 RREPKVSGKPSFGNTYSALNALAGHFNSFGATRPHPQE 471
RR+ VS PSF +AL++LAGH++S+ RP P +
Sbjct: 75 RRDNSVSSLPSFTTMRTALDSLAGHYSSY-PNRPVPDK 111
>ref|NP_683253.1| photosystem II 11 kD protein [Thermosynechococcus elongatus BP-1]
gi|22296191|dbj|BAC10015.1| photosystem II 11 kD protein
[Thermosynechococcus elongatus BP-1]
Length = 134
Score = 57.4 bits (137), Expect = 2e-07
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +1
Query: 211 TALFDTYTAETSAILDKVKVTLALDKDDPAKEDSVKGLRKDINNWVAKYRREPKVSGKPS 390
T L + +T A++ ++ +AL ++DP K+ + RK +N++ A YRR+ + S
Sbjct: 27 TGLTGNFREDTLALISSLREAIALPENDPNKKAAQAEARKKLNDFFALYRRDDSLRSLSS 86
Query: 391 FGNTYSALNALAGHFNSFGATRPHPQE 471
F +ALN+LAGH++S+ RP P++
Sbjct: 87 FMTMQTALNSLAGHYSSY-PNRPLPEK 112
