Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000945A_C01 KCC000945A_c01
(598 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ64640.1| NADH:ubiquinone oxidoreductase 18 kD-like subunit... 301 e-100
ref|NP_201560.1| expressed protein [Arabidopsis thaliana] gi|975... 104 1e-21
gb|AAM63888.1| unknown [Arabidopsis thaliana] 104 1e-21
ref|NP_491359.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 ... 97 2e-19
dbj|BAC20889.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, m... 97 2e-19
>gb|AAQ64640.1| NADH:ubiquinone oxidoreductase 18 kD-like subunit [Chlamydomonas
reinhardtii]
Length = 187
Score = 301 bits (770), Expect(2) = e-100
Identities = 145/145 (100%), Positives = 145/145 (100%)
Frame = +1
Query: 142 SAMGPKEGGFTAGVPLDTFTRKARIYAPARTASQSGLARTVDFATTTPAWKIEFEPTAKW 321
SAMGPKEGGFTAGVPLDTFTRKARIYAPARTASQSGLARTVDFATTTPAWKIEFEPTAKW
Sbjct: 43 SAMGPKEGGFTAGVPLDTFTRKARIYAPARTASQSGLARTVDFATTTPAWKIEFEPTAKW 102
Query: 322 QNPLMGWTSSADPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRTQRTKRYMQY 501
QNPLMGWTSSADPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRTQRTKRYMQY
Sbjct: 103 QNPLMGWTSSADPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRTQRTKRYMQY 162
Query: 502 GDNFGTKRAGVPDLSTLPSNRAAAK 576
GDNFGTKRAGVPDLSTLPSNRAAAK
Sbjct: 163 GDNFGTKRAGVPDLSTLPSNRAAAK 187
Score = 85.5 bits (210), Expect(2) = e-100
Identities = 45/50 (90%), Positives = 45/50 (90%)
Frame = +3
Query: 15 MQRSILSALLPRLPLGVREFATASADYSIAMKKAAEITGAAEQRYGAKGG 164
MQRSILSALLPRLPLGVREFATASADYSIAMKKAAEITGAAE G K G
Sbjct: 1 MQRSILSALLPRLPLGVREFATASADYSIAMKKAAEITGAAESAMGPKEG 50
>ref|NP_201560.1| expressed protein [Arabidopsis thaliana] gi|9757880|dbj|BAB08467.1|
contains similarity to NADH dehydrogenase chain
CI-18~gene_id:K9I9.16 [Arabidopsis thaliana]
gi|26452345|dbj|BAC43258.1| unknown protein [Arabidopsis
thaliana] gi|28372842|gb|AAO39903.1| At5g67590
[Arabidopsis thaliana]
Length = 154
Score = 104 bits (259), Expect = 1e-21
Identities = 56/127 (44%), Positives = 73/127 (57%)
Frame = +1
Query: 160 EGGFTAGVPLDTFTRKARIYAPARTASQSGLARTVDFATTTPAWKIEFEPTAKWQNPLMG 339
E G +G+P + +RK IY+PARTA+QSG + WKI F T KW+NPLMG
Sbjct: 38 EIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKL-------GKWKINFVSTLKWENPLMG 90
Query: 340 WTSSADPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRTQRTKRYMQYGDNFGT 519
WTS+ DP NVG SAL F ++E A F E+ GW+Y+V +PN + Y DNF
Sbjct: 91 WTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPN----TPLLKVKSYSDNFKW 146
Query: 520 KRAGVPD 540
K P+
Sbjct: 147 KGNPQPE 153
>gb|AAM63888.1| unknown [Arabidopsis thaliana]
Length = 154
Score = 104 bits (259), Expect = 1e-21
Identities = 56/127 (44%), Positives = 73/127 (57%)
Frame = +1
Query: 160 EGGFTAGVPLDTFTRKARIYAPARTASQSGLARTVDFATTTPAWKIEFEPTAKWQNPLMG 339
E G +G+P + +RK IY+PARTA+QSG + WKI F T KW+NPLMG
Sbjct: 38 EIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKL-------GKWKINFVSTLKWENPLMG 90
Query: 340 WTSSADPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRTQRTKRYMQYGDNFGT 519
WTS+ DP NVG SAL F ++E A F E+ GW+Y+V +PN + Y DNF
Sbjct: 91 WTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPN----TPLLKVKSYSDNFKW 146
Query: 520 KRAGVPD 540
K P+
Sbjct: 147 KGNPQPE 153
>ref|NP_491359.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 (NADH-coenzyme Q
reductase), LiPid Depleted LPD-5 (lpd-5) [Caenorhabditis
elegans] gi|7206844|gb|AAF40003.1| Hypothetical protein
ZK973.10 [Caenorhabditis elegans]
Length = 199
Score = 96.7 bits (239), Expect = 2e-19
Identities = 53/117 (45%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +1
Query: 178 GVPLD-TFTRKARIYAPARTASQSGLARTVDFATTTPAWKIEFEPTAKWQNPLMGWTSSA 354
GVPLD R ARI+ PAR +QS T +W IE + +W+NPLMGW+ +A
Sbjct: 88 GVPLDHQDARTARIFRPARETTQSAWGNT-------KSWTIELDNRQRWENPLMGWSGTA 140
Query: 355 DPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRTQRTKRYMQYGDNFGTKR 525
DPL NVG L F TKE+A+ FCEK WE++V EP++R+ + YG NF R
Sbjct: 141 DPLSNVGMD-LKFATKEDAIAFCEKNRWEFDVEEPHERKI----KPKNYGQNFSWNR 192
>dbj|BAC20889.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial
precursor-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 145
Score = 96.7 bits (239), Expect = 2e-19
Identities = 51/111 (45%), Positives = 62/111 (54%)
Frame = +1
Query: 154 PKEGGFTAGVPLDTFTRKARIYAPARTASQSGLARTVDFATTTPAWKIEFEPTAKWQNPL 333
P E G +G+P + RK IY+PARTASQ G + WKI F T KW+NPL
Sbjct: 40 PGEIGMVSGIPEEHLRRKVVIYSPARTASQQGSGKV-------GRWKINFVSTQKWENPL 92
Query: 334 MGWTSSADPLENVGRSALVFYTKEEAMRFCEKLGWEYEVTEPNKRRTQRTK 486
MGWTS+ DP NVG + L F + + A F EK GW+Y V KR T K
Sbjct: 93 MGWTSTGDPYANVGEAGLTFDSADSAKAFAEKHGWDYVV---RKRHTPLLK 140
