KCC000944A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000944A_C01 KCC000944A_c01
aACCTACACAGTCTTACCTGGATTCTCAGTACACCCTGTCCTCGCCGTCCCGCAAGTCAA
GGTGCCTTTTCGTTGAGCATCGTAAGCTAGTCTCCTCACGTCTTCCTCGCGGCCTACCTT
CATAATGGCGCAAGCAACCAGCCCGAAAGGTCCCGCTACCTACAAGGACAATCAGGACCG
TGCTTACAACTCAAAGGCAAAGATGCTGATTTACGGTGGCGACGAGCGTCCGGATACGCC
GCAGCACATCGGCAAGAAGAGCGTTAATAAGCGCGACGGCTTGGGTGCCCCGTTCGCCAC
CTACAACGACGACGTCGCGAAGCCCGAGGACGCCTCCAAGGACTACCACTCCAAGCCCAA
GACGAAGGACGGCGCCTCCAAACCGACGGGGGCGGCCTTCAACGCGGACGTCTATCGCGA
GCAGCTAGCCAACAACTACACAAACATGCAGGCGAGCAAGGCCCGCAACTACGGCGGCAG
CAACATCTTCGGCGGGCCTACCAACTAAAGCAACATCCCCCATGCATGGAGGAGCGGGAG
GCTCCATCAGCTGGAGGCTGCAATGCACATAGAAGGGGCAGTGGAAGTCGCTAGGGAAAG
CTGAGTGGGCCGATGCCAGCGCATTGTGCGCGGTTGGGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000944A_C01 KCC000944A_c01
         (640 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T43481 probable mucin DKFZp434C196.1 - human (fragment) gi|...    56  5e-07
ref|NP_610437.1| CG8181-PA [Drosophila melanogaster] gi|7303964|...    55  7e-07
dbj|BAA36223.1| chitinase [Aspergillus nidulans]                       54  3e-06
pir||JW0067 chitinase (EC 3.2.1.14) A - Emericella nidulans            54  3e-06
gb|AAK19361.1| merozoite surface protein 2 [Plasmodium falciparum]     53  3e-06

>pir||T43481 probable mucin DKFZp434C196.1 - human (fragment)
           gi|6599134|emb|CAB63715.1| hypothetical protein [Homo
           sapiens]
          Length = 580

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
 Frame = +3

Query: 72  VEHRKLVSSRLPRGLPS*WRKQPARKVPLPTRTIRTVLTTQRQRC*FTVATSVRIRRSTS 251
           + HR   +   PR  P+   ++P R  P  T    ++ T+ R        T +  R S +
Sbjct: 205 MSHRASPTRTPPRASPT---RRPPRASPTRTPPRESLRTSHRAS-----PTRMPPRASPT 256

Query: 252 ARRALISATAWVPRSPPTTTTSRSPRTPPR---TTTPSPRRRTAPPNRRGRPSTRTSIAS 422
            R    S T   PR+ P T    SPRTPPR   TTTPS    T  P+    P+T  S AS
Sbjct: 257 RRPPRASPTGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRTPS-WASPTTTPSRAS 315

Query: 423 -----S*PTTTQTCRRARPATTAAATSSAGLPTKAT---SPMHGGAGGSIS 551
                S  + T+T  RA P  T +  S  G P++A+   SP      G+ S
Sbjct: 316 LMKMESTVSITRTPPRASPTGTPSRASPTGTPSRASLTGSPSRASLTGTPS 366

 Score = 42.0 bits (97), Expect = 0.008
 Identities = 62/206 (30%), Positives = 75/206 (36%), Gaps = 32/206 (15%)
 Frame = +3

Query: 3   PTQSYLDSQYTLSSPSRKSRCLF--VEHRKLVSSRLPRGLP--S*WRKQPARKVPL--PT 164
           PT++ L      +SP+RK          R   + RLPR  P  S  R  P R  P   PT
Sbjct: 73  PTRASLMRTPPRASPTRKPPRASPRTPSRASPTRRLPRASPMGSPHRASPMRTPPRASPT 132

Query: 165 RTIRTVLTTQRQRC*FTVATSVRIRRSTSARRALI----------------SATAWVPRS 296
            T  T   T          T  R   + +  RA                  S T W PR+
Sbjct: 133 GTPSTASPTGTPSSASPTGTPPRASPTGTPPRAWATRSPSTASLTRTPSRASLTRWPPRA 192

Query: 297 PPTTTTSR---------SP-RTPPRTTTPSPRRRTAPPNRRGRPSTRTSIASS*PTTTQT 446
            PT T  R         SP RTPPR +      R +P     R S RTS  +S    T+ 
Sbjct: 193 SPTRTPPRESPRMSHRASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRAS---PTRM 249

Query: 447 CRRARPATTAAATSSAGLPTKATSPM 524
             RA P       S  G P +A SPM
Sbjct: 250 PPRASPTRRPPRASPTGSPPRA-SPM 274

 Score = 33.5 bits (75), Expect = 2.7
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
 Frame = +3

Query: 150 VPLPTRTIRTVLTTQRQRC*FTVATSVRIRRSTSARRALISA--TAWVPRSPPTTTTSRS 323
           V L     R  LT    R   T+  S      T +  +L     TA + R+PPT + +RS
Sbjct: 476 VSLKRSPSRASLTRTPSRASLTMTPSRASLTRTPSTASLTGTPPTASLTRTPPTASLTRS 535

Query: 324 PRTPPRTTTPSPRRRTAPPN 383
           P T   T TPS    T  P+
Sbjct: 536 PPTASLTRTPSTASLTRMPS 555

 Score = 32.3 bits (72), Expect = 6.0
 Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
 Frame = +3

Query: 222 TSVRIRRSTSARRALISAT---AWVPRSPPTTTTSRSPRTPPRTTTPSPRRRTAPPNRRG 392
           T  R   + +  RA ++ T   A + R+P   +  RSP     T TPS    T  P+R  
Sbjct: 445 TPPRASLTRTPPRASLTRTPPRASLTRTPSMVSLKRSPSRASLTRTPSRASLTMTPSRAS 504

Query: 393 RPSTRTSIASS*PTTTQTCRRARPATTAAATSSAGLPTKATSP 521
              TRT   +S   T  T    R   TA+ T S    +   +P
Sbjct: 505 --LTRTPSTASLTGTPPTASLTRTPPTASLTRSPPTASLTRTP 545

 Score = 32.3 bits (72), Expect = 6.0
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
 Frame = +3

Query: 219 ATSVRIRRSTSARRALISATAWVPRSPPTTTTSRSP------RTPPR---TTTPSPRRRT 371
           A+  R + S+S  R    + A + R+PP  + +R+P      RTPPR   T TP     T
Sbjct: 413 ASLTRTQSSSSLTRT--PSMASLTRTPPRASLTRTPPRASLTRTPPRASLTRTPPRASLT 470

Query: 372 APPNRRG--RPSTRTSI--ASS*PTTTQTCRRARPATTAAATSSAGLPTKAT 515
             P+     R  +R S+    S  + T T  RA    T +  S  G P  A+
Sbjct: 471 RTPSMVSLKRSPSRASLTRTPSRASLTMTPSRASLTRTPSTASLTGTPPTAS 522

>ref|NP_610437.1| CG8181-PA [Drosophila melanogaster] gi|7303964|gb|AAF59007.1|
           CG8181-PA [Drosophila melanogaster]
          Length = 746

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 53/172 (30%), Positives = 74/172 (42%), Gaps = 5/172 (2%)
 Frame = +3

Query: 6   TQSYLDSQYTLSSPSRKSRCLFVEHRKLVSSRLPRGLPS*WRKQPARKVPLPTRTIRTVL 185
           TQ+   S  T S+ S  +  +F +  +L  +R    LP    + P R  P PT  I  V 
Sbjct: 334 TQTSSSSTTTTSTTSTITTTVFKD--ELPKNRTTTRLPERTTQAP-RPRPKPTGEIVKVP 390

Query: 186 TTQRQRC*FTVATSVRIRRSTSARRALISATAWVPRSPPTTT-----TSRSPRTPPRTTT 350
               +    TV        S+S +    S T  V +  PTTT     T+ +  T   TTT
Sbjct: 391 ALLAEPTTTTVTKGSSSSSSSSPKPPASSTTPLVTKKKPTTTNAPTTTTTTTTTTTTTTT 450

Query: 351 PSPRRRTAPPNRRGRPSTRTSIASS*PTTTQTCRRARPATTAAATSSAGLPT 506
           P P RRT PP      +T+ +  ++  TTT T   A+P  T    +SA L T
Sbjct: 451 PKPTRRTKPPTTTTTTTTKATTTTTKATTTTT--TAKPLITTEPPTSAPLTT 500

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 38/127 (29%), Positives = 58/127 (44%), Gaps = 10/127 (7%)
 Frame = +3

Query: 159 PTRTIRTVLTTQRQRC*FTVATSVRIRRSTSARRALISATAWVPRSPPTTTTSRS----- 323
           PT    T  TT R+    T ++SV   R+TS      + T     +PPTTT++R+     
Sbjct: 205 PTHQQETTTTTTRRHTRPTGSSSVA-SRTTSKTTTTTTTTTTTTAAPPTTTSTRAATTTQ 263

Query: 324 -PRTPPRTTTPSPRR----RTAPPNRRGRPSTRTSIASS*PTTTQTCRRARPATTAAATS 488
            P  P RTTT  P +    R   P ++   +T T+ + +  T       A  +TTA  T+
Sbjct: 264 RPTPPLRTTTSKPHKTHSSRRPAPAKKPVSTTTTTASGTQSTRKPADSLASGSTTANGTT 323

Query: 489 SAGLPTK 509
           +  LP +
Sbjct: 324 ATTLPAR 330

 Score = 37.0 bits (84), Expect = 0.24
 Identities = 34/111 (30%), Positives = 45/111 (39%), Gaps = 15/111 (13%)
 Frame = +3

Query: 237 RRSTSARRALISA--------TAWVPRS-------PPTTTTSRSPRTPPRTTTPSPRRRT 371
           RR+T+A+  L +A        T  VP           TT     P     TTT + RR T
Sbjct: 161 RRTTTAKPVLTTAPIVEQRIETTSVPTKFVTFQIVETTTPAVTEPTHQQETTTTTTRRHT 220

Query: 372 APPNRRGRPSTRTSIASS*PTTTQTCRRARPATTAAATSSAGLPTKATSPM 524
            P       S  TS  ++  TTT T   A P TT  +T +A    + T P+
Sbjct: 221 RPTGSSSVASRTTSKTTTTTTTTTTTTAAPPTTT--STRAATTTQRPTPPL 269

>dbj|BAA36223.1| chitinase [Aspergillus nidulans]
          Length = 961

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
 Frame = +3

Query: 138 PARKVPLPTRTIRTVLTTQRQRC*FTVATSVRIRRSTSARRALISATAWVPRSPPTTTTS 317
           P    P PT T  T  T+       T  TS     ST++  +  S T+  P +  T+TTS
Sbjct: 345 PPTTSPTPTPTPSTTTTST------TSTTSTTSATSTTSTTSTTSTTSTTPTTSTTSTTS 398

Query: 318 RSPRTP---PRTTTPSPRRRTAP-PNRRGRPSTRTSIASS*PTTTQTCRRARPATTAAAT 485
            +  TP   P T + S      P P      S+ TS  SS P+T+       P+ T   T
Sbjct: 399 TTTPTPSPSPSTASSSTTETVTPSPKPSPSESSTTSETSSLPSTSTPVVSETPSETKTPT 458

Query: 486 SSAGLPTKATSPMHGGAGGSIS 551
           SS+  P  ++SP+ G +  + S
Sbjct: 459 SSSAPPLSSSSPVGGSSSTASS 480

 Score = 38.1 bits (87), Expect = 0.11
 Identities = 21/68 (30%), Positives = 34/68 (49%), Gaps = 2/68 (2%)
 Frame = +3

Query: 324 PRTPPRTT--TPSPRRRTAPPNRRGRPSTRTSIASS*PTTTQTCRRARPATTAAATSSAG 497
           P  PP TT  TP+P   T   +     ST ++ +++  T+T +     P T+  +T+S  
Sbjct: 341 PNHPPPTTSPTPTPTPSTTTTSTTSTTSTTSATSTTSTTSTTSTTSTTPTTSTTSTTSTT 400

Query: 498 LPTKATSP 521
            PT + SP
Sbjct: 401 TPTPSPSP 408

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 32/124 (25%), Positives = 51/124 (40%), Gaps = 2/124 (1%)
 Frame = +3

Query: 153 PLPTRTIRTVLTTQRQRC*FTVATSVRIRRSTSARRALISATAWVPRSPPTTTTSRSPRT 332
           P P  ++ T  T+         ATS     +++   +  + T     S P   T+ +  T
Sbjct: 611 PTPGSSVSTGTTSASTLSSSVPATSGGHTETSTVSTSSANQTPSASTSKPLIPTNSASST 670

Query: 333 PPRTTTPSPRRRTAPPNRRGRPST-RTSIASS*PTTTQT-CRRARPATTAAATSSAGLPT 506
              + T +P     P +  G   T  TS   S PT+T +    A+P TT  AT++  + T
Sbjct: 671 STGSVTSTPSAPGVPSSSAGSDETATTSTTDSEPTSTSSGSVTAKPTTTEPATTTTIIVT 730

Query: 507 KATS 518
             TS
Sbjct: 731 SYTS 734

>pir||JW0067 chitinase (EC 3.2.1.14) A - Emericella nidulans
          Length = 660

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
 Frame = +3

Query: 138 PARKVPLPTRTIRTVLTTQRQRC*FTVATSVRIRRSTSARRALISATAWVPRSPPTTTTS 317
           P    P PT T  T  T+       T  TS     ST++  +  S T+  P +  T+TTS
Sbjct: 345 PPTTSPTPTPTPSTTTTST------TSTTSTTSATSTTSTTSTTSTTSTTPTTSTTSTTS 398

Query: 318 RSPRTP---PRTTTPSPRRRTAP-PNRRGRPSTRTSIASS*PTTTQTCRRARPATTAAAT 485
            +  TP   P T + S      P P      S+ TS  SS P+T+       P+ T   T
Sbjct: 399 TTTPTPSPSPSTASSSTTETVTPSPKPSPSESSTTSETSSLPSTSTPVVSETPSETKTPT 458

Query: 486 SSAGLPTKATSPMHGGAGGSIS 551
           SS+  P  ++SP+ G +  + S
Sbjct: 459 SSSAPPLSSSSPVGGSSSTASS 480

 Score = 38.1 bits (87), Expect = 0.11
 Identities = 21/68 (30%), Positives = 34/68 (49%), Gaps = 2/68 (2%)
 Frame = +3

Query: 324 PRTPPRTT--TPSPRRRTAPPNRRGRPSTRTSIASS*PTTTQTCRRARPATTAAATSSAG 497
           P  PP TT  TP+P   T   +     ST ++ +++  T+T +     P T+  +T+S  
Sbjct: 341 PNHPPPTTSPTPTPTPSTTTTSTTSTTSTTSATSTTSTTSTTSTTSTTPTTSTTSTTSTT 400

Query: 498 LPTKATSP 521
            PT + SP
Sbjct: 401 TPTPSPSP 408

>gb|AAK19361.1| merozoite surface protein 2 [Plasmodium falciparum]
          Length = 152

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 35/82 (42%), Positives = 43/82 (51%), Gaps = 2/82 (2%)
 Frame = +3

Query: 270 SATAWVPRSPPTTTTSRSPRTPPRTTTPSPRRRTAPPNRRGRPSTRTSIASS*P--TTTQ 443
           +AT    RSPP TTT  + R+PP TTT S        N R  P T T   S  P  TTT+
Sbjct: 70  TATESNSRSPPITTTESNSRSPPITTTES--------NSRSPPITTTESNSRSPPITTTE 121

Query: 444 TCRRARPATTAAATSSAGLPTK 509
           +  R+RP TT  ++SS   P K
Sbjct: 122 SNSRSRPITTTESSSSGNAPNK 143

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +3

Query: 246 TSARRALISATAWVPRSPPTTTTSRSPRTPPRTTTPSPRRRTAPPNRRGR 395
           +++R   I+ T    RSPP TTT  + R+ P TTT S     AP    G+
Sbjct: 98  SNSRSPPITTTESNSRSPPITTTESNSRSRPITTTESSSSGNAPNKTDGK 147



EST assemble image


clone accession position
1 HC060h03_r AV636545 1 574
2 HC040f11_r AV635004 14 524
3 LC059e03_r AV623143 15 621
4 LC047c09_r AV622261 86 560
5 MX068e07_r BP088771 87 518
6 LC064d11_r AV623483 90 586
7 CM072d02_r AV391461 90 673
8 HC054c06_r AV636031 91 508
9 HC077h08_r AV637817 91 586
10 LC003c08_r AV619065 92 469
11 LC006g05_r AV619330 92 596
12 CM091a07_r AV397548 93 605
13 MX048e10_r BP087983 97 440
14 CM004g08_r AV386671 99 658
15 LC100f08_r AV625981 100 500
16 LC089a02_r AV625182 101 550
17 LC086b01_r AV625029 102 541
18 CM006h10_r AV387204 102 655
19 HC063d03_r AV636721 102 566
20 LC035a04_r AV621361 103 665
21 MX240f11_r BP091539 103 461
22 LC091g01_r AV625376 105 539
23 CM028b09_r AV387720 109 730
24 HC054g02_r AV636063 109 540
25 HC099f03_r AV639455 109 521
26 CM047b07_r AV388541 109 362
27 HC060f05_r AV636525 109 638
28 MX229e08_r BP090814 113 544
29 CM099c03_r AV393114 114 645
30 HCL061c11_r AV642962 120 635
31 MX018d06_r BP086849 121 513
32 CM062a03_r AV390174 127 725
33 LC048a11_r AV622318 172 682
34 CM098d02_r AV392926 204 649




Chlamydomonas reinhardtii
Kazusa DNA Research Institute