Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000936A_C01 KCC000936A_c01
(555 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays] 45 6e-04
emb|CAD19511.1| UL36 protein [Pseudorabies virus] 42 0.004
ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil... 42 0.005
ref|NP_064121.1| pr5 [Rat cytomegalovirus] gi|9800242|gb|AAF9911... 41 0.009
gb|EAA37672.1| GLP_171_822_355 [Giardia lamblia ATCC 50803] 40 0.027
>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
Length = 274
Score = 45.1 bits (105), Expect = 6e-04
Identities = 45/150 (30%), Positives = 56/150 (37%), Gaps = 2/150 (1%)
Frame = +1
Query: 37 GSTGCCATSSATAPSRSSSRPWMPTRQSWPSSTAVVVSARC*PRRTTGQCPGAAGPGAHR 216
G A+S+ATA +S+ PT P++T+ T CPG + R
Sbjct: 2 GRAATRASSAATATPSTSTAAGTPTSACSPTATSTSTRTSSASTAPTA-CPGTSR--GSR 58
Query: 217 PQQRPGRSRSLTRGPCARFRCTWASGCWGVPPSPSRVTSCERSLPPVRPRD-RPCIDPS- 390
P + S T P R R T S W P + S SC P RP R C P+
Sbjct: 59 PSPCSSTATSSTSAPGRRPRGTTTSTAWSSPWTASPCASCREPTPRGRPAPCRRCPSPAP 118
Query: 391 *MPRAVQRRLTRRRADGPVTTQQQGLRTSP 480
P A R T GP Q R SP
Sbjct: 119 ARPTACSSRSTAGSPSGPTPCPSQ--RRSP 146
>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
Length = 3084
Score = 42.4 bits (98), Expect = 0.004
Identities = 41/153 (26%), Positives = 59/153 (37%), Gaps = 8/153 (5%)
Frame = +1
Query: 67 ATAPSRSSSRPWMPTRQSWPSSTAVVVSARC*PRRTTGQCPGAAGPGAHRPQQRPGRSRS 246
ATAP+ ++ P P Q P++ + P Q P A P A +P +P + +
Sbjct: 2271 ATAPAPETAPPEAPQAQP-PAAAKPTPQPQGPP--PPPQPPSAQAPPAQKPPAQPATAAA 2327
Query: 247 LTRGPCA-RFRCTWASGCWGVPPSPSRVTSCER-------SLPPVRPRDRPCIDPS*MPR 402
T + + + PP PS T+ + S P +PR P P+ P
Sbjct: 2328 TTAPKATPQTQPPTRAQTQTAPPPPSAATAAAQVPPQPPSSQPAAKPRGAPPAPPAPPPP 2387
Query: 403 AVQRRLTRRRADGPVTTQQQGLRTSPRPRPPTP 501
+ Q L R A P T PRP PP P
Sbjct: 2388 SAQTTLPRPAAP-PAPPPPSAQTTLPRPAPPPP 2419
>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
melanogaster]
Length = 1225
Score = 42.0 bits (97), Expect = 0.005
Identities = 40/170 (23%), Positives = 60/170 (34%), Gaps = 9/170 (5%)
Frame = +1
Query: 16 TSRLGCAGSTGCCATSSATAPSRSSSRPWMPTRQSWPSSTA---VVVSARC*PRRTTGQC 186
T+R + C T+S AP+ ++ R T S P++T ++ C P RTT +
Sbjct: 263 TTRRPTTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRS 322
Query: 187 P---GAAGPGAHRPQQRPGRSRSLTRGPCARFRCTWASGCWGVPPSP---SRVTSCERSL 348
+ P P+ S + TR P + + C P + S T+C
Sbjct: 323 TTTTSTSRPTTTTPRCTTTPSTTCTRRPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSGP 382
Query: 349 PPVRPRDRPCIDPS*MPRAVQRRLTRRRADGPVTTQQQGLRTSPRPRPPT 498
PR S R T GP TT + T+ P T
Sbjct: 383 TTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTT 432
Score = 32.7 bits (73), Expect = 3.3
Identities = 36/153 (23%), Positives = 51/153 (32%), Gaps = 6/153 (3%)
Frame = +1
Query: 58 TSSATAPSRSSSRPWMPTRQSWPSSTAVVVSARC*PRRTTG---QCPGAAGPGAHRPQQR 228
T+S + P+ ++ R T S P++T PR TT CP P +
Sbjct: 824 TTSTSGPTTTTPRSTTTTSTSGPTTTT--------PRSTTTTSTSCPTTTTPRS------ 869
Query: 229 PGRSRSLTRGPCA---RFRCTWASGCWGVPPSPSRVTSCERSLPPVRPRDRPCIDPS*MP 399
+ + T GP R T + C S T+C PR S
Sbjct: 870 --TTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPT 927
Query: 400 RAVQRRLTRRRADGPVTTQQQGLRTSPRPRPPT 498
R T+ P TT + T+ RP T
Sbjct: 928 TTTPRSTTKTSTCAPTTTTPRSTTTTSTSRPTT 960
>ref|NP_064121.1| pr5 [Rat cytomegalovirus] gi|9800242|gb|AAF99116.1|AF232689_7 pr5
[rat cytomegalovirus Maastricht]
Length = 629
Score = 41.2 bits (95), Expect = 0.009
Identities = 40/119 (33%), Positives = 49/119 (40%), Gaps = 12/119 (10%)
Frame = +1
Query: 10 GRTSRLGCAGSTGCCATSSATAPSRSSSRPWM------------PTRQSWPSSTAVVVSA 153
G T R A S G A+S T+P+R P PT +WP+STA A
Sbjct: 458 GGTGRATAATSDGTAASSRTTSPARPCGSPATSRAPASGGSARGPT--TWPASTA----A 511
Query: 154 RC*PRRTTGQCPGAAGPGAHRPQQRPGRSRSLTRGPCARFRCTWASGCWGVPPSPSRVT 330
C RR++ C GAA P R G S + P RC W S W P S + T
Sbjct: 512 SCTTRRSSSTCRGAARP-------RDGSSPT----PARSGRCPW-SPPWPRPGSAAAST 558
>gb|EAA37672.1| GLP_171_822_355 [Giardia lamblia ATCC 50803]
Length = 155
Score = 39.7 bits (91), Expect = 0.027
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Frame = +1
Query: 31 CAGSTG--CCA---TSSATAPSRSSSR--PWMPTRQSWPSSTAVVV----SARC*PRRTT 177
CA S G CC +SS P+ +R P P +S PS+++ +V + + PR +
Sbjct: 30 CASSLGGRCCPAVRSSSQPGPAAPHTRWAPATPGPRSSPSASSKLVCHLPAEQSVPRASP 89
Query: 178 GQCPGAAGPGAHRPQQR---PGRSRSLTRGPCARFRCTWASGCWGVPPSPSRVTSCERSL 348
+ G P RP+ R G++ RG AR CT A G P P++ C+
Sbjct: 90 PR--GRRTPPVRRPKPRVRDSGQNVGRVRGRRAR-PCTPALASTGTPSRPAKGLRCDSCR 146
Query: 349 PPVRPRDR 372
P RPR R
Sbjct: 147 PVARPRPR 154
