Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000932A_C01 KCC000932A_c01
(669 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_681089.1| 50S ribosomal protein L12 [Thermosynechococcus ... 82 4e-23
ref|NP_050665.1| ribosomal protein L12 [Guillardia theta] gi|609... 75 8e-21
ref|NP_045915.1| ribosomal protein L12 [Chlorella vulgaris] gi|3... 77 1e-20
ref|NP_440736.1| 50S ribosomal protein L12 [Synechocystis sp. PC... 79 6e-19
ref|NP_053949.1| ribosomal protein L12 [Porphyra purpurea] gi|17... 74 4e-18
>ref|NP_681089.1| 50S ribosomal protein L12 [Thermosynechococcus elongatus BP-1]
gi|22294019|dbj|BAC07851.1| 50S ribosomal protein L12
[Thermosynechococcus elongatus BP-1]
Length = 132
Score = 81.6 bits (200), Expect(3) = 4e-23
Identities = 46/76 (60%), Positives = 58/76 (75%), Gaps = 4/76 (5%)
Frame = +1
Query: 211 SELVSEIEKTFGVDASAAAPVAMAAIAAP--GAAAAPA--VEEKTTFDVVLEEIPADKKV 378
+ELV +IE+TFGV SAAAPV +AAP GAAAAPA VEEKT FDV+LEE+PADKK+
Sbjct: 21 AELVKQIEETFGV--SAAAPVGGMMVAAPVAGAAAAPAEEVEEKTAFDVILEEVPADKKI 78
Query: 379 GVYKVVRNIANIAVNQ 426
V KVVR++ + + +
Sbjct: 79 AVLKVVRSLTGLGLKE 94
Score = 42.0 bits (97), Expect(3) = 4e-23
Identities = 20/29 (68%), Positives = 23/29 (78%)
Frame = +2
Query: 452 PKVLKEGLSKEDAEAAKAQLLEAGAKAKV 538
PK +KEG SKEDAEAAK +L EAGAK +
Sbjct: 103 PKPVKEGASKEDAEAAKKELEEAGAKVSI 131
Score = 26.6 bits (57), Expect(3) = 4e-23
Identities = 12/17 (70%), Positives = 15/17 (87%)
Frame = +3
Query: 159 AVSEIVDKLKTLTLLEA 209
A EI++KLK+LTLLEA
Sbjct: 4 ATDEILEKLKSLTLLEA 20
>ref|NP_050665.1| ribosomal protein L12 [Guillardia theta]
gi|6093978|sp|O78414|RK12_GUITH Chloroplast 50S
ribosomal protein L12 gi|3602938|gb|AAC35599.1|
ribosomal protein L12 [Guillardia theta]
Length = 129
Score = 75.1 bits (183), Expect(3) = 8e-21
Identities = 39/77 (50%), Positives = 55/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 SELVSEIEKTFGVDASAAA-PVAMAAIAAPGAAAAPAVEEKTTFDVVLEEIPADKKVGVY 387
++LV +IE+TF V A+AAA P+ M A A GA +A AVEEKT FD++LE++PADKK+ V
Sbjct: 20 ADLVKQIEETFNVSATAAAAPINMVAATA-GAGSAEAVEEKTEFDLILEDVPADKKIAVL 78
Query: 388 KVVRNIANIAVNQVNGL 438
KVVR + + + + L
Sbjct: 79 KVVRGLTGLGLKEAKDL 95
Score = 42.7 bits (99), Expect(3) = 8e-21
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +2
Query: 434 DFTATLPKVLKEGLSKEDAEAAKAQLLEAGAKA 532
D PK +KEG+SK DAEA K QL EAGAKA
Sbjct: 94 DLVEAAPKPIKEGMSKADAEAGKKQLEEAGAKA 126
Score = 24.6 bits (52), Expect(3) = 8e-21
Identities = 11/16 (68%), Positives = 13/16 (80%)
Frame = +3
Query: 162 VSEIVDKLKTLTLLEA 209
V I+D+LK LTLLEA
Sbjct: 4 VQNIIDQLKDLTLLEA 19
>ref|NP_045915.1| ribosomal protein L12 [Chlorella vulgaris]
gi|3024542|sp|P56345|RK12_CHLVU Chloroplast 50S
ribosomal protein L12 gi|7440730|pir||T07343 ribosomal
protein L12 - Chlorella vulgaris chloroplast
gi|2224507|dbj|BAA57991.1| 50S ribosomal protein L12
[Chlorella vulgaris]
Length = 131
Score = 77.0 bits (188), Expect(2) = 1e-20
Identities = 42/75 (56%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Frame = +1
Query: 211 SELVSEIEKTFGVDASAAAPVAMAAIAAPGAA---AAPAVEEKTTFDVVLEEIPADKKVG 381
+ELVS+IE+TFGVDASA PV +AAPG A AA VEEKTTFDV++E++ +DK+V
Sbjct: 21 AELVSQIEETFGVDASA--PVGGGFMAAPGGAGTAAAEIVEEKTTFDVIIEDVASDKRVP 78
Query: 382 VYKVVRNIANIAVNQ 426
V KVVRN+ ++ + +
Sbjct: 79 VLKVVRNLTSLDLKE 93
Score = 44.7 bits (104), Expect(2) = 1e-20
Identities = 19/32 (59%), Positives = 29/32 (90%)
Frame = +2
Query: 446 TLPKVLKEGLSKEDAEAAKAQLLEAGAKAKVA 541
+LPKV+++G+SK+DAEA+K QL +AGAK K++
Sbjct: 100 SLPKVIQQGVSKDDAEASKKQLEDAGAKVKIS 131
>ref|NP_440736.1| 50S ribosomal protein L12 [Synechocystis sp. PCC 6803]
gi|132654|sp|P23349|RL7_SYNY3 50S ribosomal protein
L7/L12 gi|79729|pir||S13069 ribosomal protein L12 -
Synechocystis sp. (strain PCC 6803)
gi|47476|emb|CAA37318.1| unnamed protein product
[Synechocystis sp. PCC 6803] gi|1652495|dbj|BAA17416.1|
50S ribosomal protein L12 [Synechocystis sp. PCC 6803]
gi|227225|prf||1617100B ribosomal protein L12
Length = 128
Score = 79.3 bits (194), Expect(2) = 6e-19
Identities = 43/76 (56%), Positives = 52/76 (67%)
Frame = +1
Query: 211 SELVSEIEKTFGVDASAAAPVAMAAIAAPGAAAAPAVEEKTTFDVVLEEIPADKKVGVYK 390
SELV +IE+ FGV SAAAPV +AA AA A A EEKT FDV+LEE+PADKK+ V K
Sbjct: 21 SELVKQIEEAFGV--SAAAPVGGMVMAAAAAAPAEAAEEKTEFDVILEEVPADKKIAVLK 78
Query: 391 VVRNIANIAVNQVNGL 438
VVR I + + + L
Sbjct: 79 VVRTITGLGLKEAKEL 94
Score = 37.0 bits (84), Expect(2) = 6e-19
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 434 DFTATLPKVLKEGLSKEDAEAAKAQLLEAGAKAKV 538
+ + PK +KE K+DAEA K Q+ EAG KA V
Sbjct: 93 ELVESTPKAIKEATGKDDAEAIKKQIEEAGGKAAV 127
>ref|NP_053949.1| ribosomal protein L12 [Porphyra purpurea]
gi|1710409|sp|P51339|RK12_PORPU Chloroplast 50S
ribosomal protein L12 gi|2147043|pir||S73260 ribosomal
protein L12 - red alga (Porphyra purpurea) chloroplast
gi|1276805|gb|AAC08225.1| 50S ribosomal protein L12
[Porphyra purpurea]
Length = 129
Score = 73.6 bits (179), Expect(2) = 4e-18
Identities = 41/76 (53%), Positives = 52/76 (67%)
Frame = +1
Query: 211 SELVSEIEKTFGVDASAAAPVAMAAIAAPGAAAAPAVEEKTTFDVVLEEIPADKKVGVYK 390
+ELV +IE+TF VDASAA+ M A A A AA VEEKT FDVVLEE+PA KK+ V K
Sbjct: 21 AELVKQIEETFDVDASAASGGVMMA-APSSAPAASDVEEKTEFDVVLEEVPAPKKIAVLK 79
Query: 391 VVRNIANIAVNQVNGL 438
VVR++ + + + L
Sbjct: 80 VVRSLTGLGLKEAKDL 95
Score = 40.0 bits (92), Expect(2) = 4e-18
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 434 DFTATLPKVLKEGLSKEDAEAAKAQLLEAGAKAKV 538
D + PK LKEG SK+DAEA K QL +AGA V
Sbjct: 94 DLVESAPKTLKEGASKDDAEAMKKQLEDAGATVGV 128
