KCC000928A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000928A_C01 KCC000928A_c01
gattaggtGCCATGTCGCGTTGCAGCTCCTCCACGCGCTTCCTAGCGCTGGCGCTGGCAA
TTAGTTGCCTCCATGCGAGCGTCGCCTTCAGCCCTGCAGCTGACACCAAGCTCGTGCTGG
TGCTCGAAGGAGATTCTATTACAGATAATGGCAACGTGTTCAAGCTGCTGGGCGCGCCGA
ACCCCAAGTTCTATTTCCCTGGGAGGTTCACAAACGGGCCAAATTGGGTTGACTACCTGA
CGGACGCAGTCTCCAAGTTCGTGAAGAACGTCACGGTTCACAACTACGCATATGGCGGCG
CTACTGCCTGCGCAAACAACGAGACTGCCACTATAGTCCCGGTCATCAAGGACCTTGGAA
ACCAGACGGCGGCATTCCTGGCCGATGCGGCGGCGGGCAAGGTTCCCAAGCCCAGCGCGG
ACACGCGTGTGGTGCTGATCCAATGGGTTGGCAGCAACGACATTGACGGCGCCCTGAGGC
AGCTGGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000928A_C01 KCC000928A_c01
         (488 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00110091.1| COG3240: Phospholipase/lecithinase/hemolysin ...    64  1e-09
dbj|BAA77240.1| esterase [Acidiphilium sp. AIU409]                     64  1e-09
ref|ZP_00107222.1| COG3240: Phospholipase/lecithinase/hemolysin ...    63  2e-09
ref|ZP_00106775.1| COG3240: Phospholipase/lecithinase/hemolysin ...    63  2e-09
pir||S31625 glycerophospholipid-cholesterol acyltransferase - Ae...    62  3e-09

>ref|ZP_00110091.1| COG3240: Phospholipase/lecithinase/hemolysin [Nostoc punctiforme]
          Length = 325

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
 Frame = +3

Query: 129 GDSITDNGNVFKLLGA---PNPKFYFPGRFTNGPNWVDYLTDAVS-KFVKNVTVHNYAYG 296
           GDS++D GNVF        PNP  YF GRF+NGP WV+YL   +   F  N   +N+A+G
Sbjct: 33  GDSLSDTGNVFNFTNGAIPPNPT-YFNGRFSNGPIWVEYLASELGLTFNPN---NNFAFG 88

Query: 297 GATACANNETATIVPVIKDLGNQTAAFLADAAAGKVPKPSADTRVVLIQWVGSND 461
           GAT   +N   + +P +K   N                 SA+   + I W G+ND
Sbjct: 89  GATTGTDNLGLSFLPGLKQEINDFT----------TTNNSANPNALYIIWAGTND 133

>dbj|BAA77240.1| esterase [Acidiphilium sp. AIU409]
          Length = 627

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
 Frame = +3

Query: 33  TRFLALALAISCLHASVAFSPAADTKLVLVLEGDSITDNGNVFKLLGAPNPKFYFPGRFT 212
           TR LA   A+S + A     PAA    + V  GDS++D+GN++KL G P P  Y+ GRF+
Sbjct: 4   TRLLAGVAALSLMAA-----PAAKAGNLYVF-GDSLSDDGNLYKLTGLP-PAPYYQGRFS 56

Query: 213 NGPNWVDYLTDAVSKFVKNVTVHNYAYGGA----------TACANNETATIVPVIKDLGN 362
           NGP WV+YL       +   + ++YAYGGA           A  N E A +  +  ++ +
Sbjct: 57  NGPVWVEYLPGLTG--LGFSSANDYAYGGAFTGALTIGTTNAGTNLEAAALPGISTEIAS 114

Query: 363 QTAA 374
            TAA
Sbjct: 115 FTAA 118

>ref|ZP_00107222.1| COG3240: Phospholipase/lecithinase/hemolysin [Nostoc punctiforme]
          Length = 299

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
 Frame = +3

Query: 48  LALAISCLHASVAFSPAADTKLVLVLEGDSITDNGNVFKLLGA---PNPKFYFPGRFTNG 218
           LAL I  +  +  F         L + GDS++D G VF+  G    PNP  YF GR++NG
Sbjct: 12  LALLIFIMVVAAKFMDKTHPISELYVFGDSLSDTGMVFRATGGMYPPNPT-YFQGRYSNG 70

Query: 219 PNWVDYLTDAVSKFVKNVTVHNYAYGGATACANNETATIVPVIKDLGNQTAAFLADAAAG 398
             W++YL +++    K    HN+AYGGAT    N   + VP    L NQ  +F       
Sbjct: 71  RVWIEYLAESLHLSPKQ--THNFAYGGATTA--NVGNSYVP---SLLNQVQSF---TQTH 120

Query: 399 KVPKPSADTRVVLIQWVGSND 461
           +   P A    + + W G+ND
Sbjct: 121 QQTNPDA----LYVLWAGAND 137

>ref|ZP_00106775.1| COG3240: Phospholipase/lecithinase/hemolysin [Nostoc punctiforme]
          Length = 324

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 42/116 (36%), Positives = 58/116 (49%), Gaps = 5/116 (4%)
 Frame = +3

Query: 129 GDSITDNGNVFKLLGA---PNPKFYFPGRFTNGPNWVDYLTD--AVSKFVKNVTVHNYAY 293
           GDS++D GNVF        P+P +Y  G F+NGPNWVDYL     ++  +KN    N+A+
Sbjct: 33  GDSLSDIGNVFNATNGIIPPSPTYY-DGHFSNGPNWVDYLASDLGLTSNLKN----NFAF 87

Query: 294 GGATACANNETATIVPVIKDLGNQTAAFLADAAAGKVPKPSADTRVVLIQWVGSND 461
           GGAT             I+++G  T   L       V   +AD   + I W G+ND
Sbjct: 88  GGATT-----------GIENIGLATLPGLQQQINNFVAAETADPNALYIIWAGTND 132

>pir||S31625 glycerophospholipid-cholesterol acyltransferase - Aeromonas
           salmonicida gi|39028|emb|CAA50021.1|
           glycerophospholipid-cholesterol acyltransferase
           [Aeromonas salmonicida]
          Length = 335

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
 Frame = +3

Query: 66  CLHASVAFS-PAADTKLV---LVLEGDSITDNGNVF-KLLG-APNPKFYFPGRFTNGPNW 227
           CL   +A +  AADT+     +V+ GDS++D G ++ K+ G  P+   Y+ GRF+NGP W
Sbjct: 7   CLLGLIALTVQAADTRPAFSRIVMFGDSLSDTGKMYSKMRGYLPSSPPYYEGRFSNGPVW 66

Query: 228 VDYLTDAVSKFVKNVTVHNYAYGGATACANNETA--TIVPVIKDLGNQTAAFLADAAAGK 401
           ++ LT    K    +T+ N A GGATA A N+ +      VI +L  +   FL       
Sbjct: 67  LEQLT----KQFPGLTIANEAEGGATAVAYNKISWNPKYQVINNLDYEVTQFL------- 115

Query: 402 VPKPSADTRVVLIQWVGSND 461
             K S     ++I WVG+ND
Sbjct: 116 -QKDSFKPDDLVILWVGAND 134



EST assemble image


clone accession position
1 LC095e02_r AV625614 1 453
2 MX206e06_r BP089396 9 348
3 CM003h01_r AV386564 14 459
4 MX260f03_r BP092900 14 488




Chlamydomonas reinhardtii
Kazusa DNA Research Institute