KCC000927A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000927A_C01 KCC000927A_c01
CTCGTCCTCACGCCAGCCTTTATCCTCGTCTTACTCGCAAACATGCTGGTCGCAAAGCAC
TTCGTGGCTCCCTCTGTGGCCCCCAGGCCCAAGGCTGCCCCGGCTCCCCGGTCCTCCCTC
GCTCGCAAGGCTGTGGCCACCCCAGTCCTGGCGGCTACTTTCAAGCCCCCGACCGTGGCT
GAGACCAAGGCCAAGTTCCTTTCCGGATACAACAAGCCCATAGCCAGCATCTACAGCACC
GTGCTGCAGGAGCTTCTCGTGCAGCAGCACTTCATGCGTTACAGCAAGAACTACCAGTAC
AACCCGATTTTCGCTCTGGGGTTTGTTAGCGTGTATGAGCAGATCCTGGAGAGCCTCAGC
GCCGAGGAGCGCGGCGCCATTTTCAAGGCGTACGTGGACGCACTAGGCGAGGATGCCGAC
AAGTACAAGCGTGACGCCTCGGCGCTGGAGCAGGCCGCCAACGGCCTGACCCCCGAGTCG
CTGACGCCCAACGCTGACGGCAACGAGGTGCAGAAGGCTCTGGCCTCCATCTCCTCCGCC
TCCGCCGCCGGCGCCTTCTCCTACAACAAGTTTGTGGCCATTGGTCTGTTCCGGCTGCTG
GAGCTGTCGGGCGCCAAGGAGCCGTCCGCCCTGGAGAAGCTGGTCAAGGCGGTGGGCGTC
AAGCCCGAGGCCGTCAACAGGGACCTGCTCATGTACAAGGGTGTGCTGTCCAAGCTGGCC
GCCGCCAAGGAGCTCATGCGCGAGTTCGTGGAGCGCGAGAAGCGGAAGCAGGCCGAGCGC
GACGCCGCCAAGGCCGCCAAGGCCGCGGGGACCGAGAGCTCGCCCGCGCAGGTGCAGGCG
TAAATGCAGCAGCGCTCGGCTGGAGGGTGGCTGTTGTCGCAATCTCGGGGGCGATGTGAC
CGCTGGCGAGGGCGCGGGGCTGATACGCGGTACGGTGGCAAGCGGCGGCACCTGCGGCAC
ATGCATGTGTGCGTATGCGGCAGGGCGCCAGCGAAAGCAGCTGGAGCTGCCGCTGCTGCT
GCAATTGGTCCGTGGTGGGGCCGTGCCCGGTCGGGTTCATCATTATTAATTGTACACATG
TGTTGCGCGTTGGGTAGCGTTTTTGTGCGTCTTACCCCGTCTGTAACCGCGGGGACGCGC
AGTGATGTGCAGGCAGACAGACGCCAAGGGGCAGGGGCTTGGTGCATGCGGTATCAGCAA
CGCATGCATTGGGGTGGTAGTAAGGGTAGCAGTGTCGTGCGTGCGCGTGAGTGAGTGTAG
TTTTTATGCAAGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000927A_C01 KCC000927A_c01
         (1273 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO72565.1| inositol phosphatase-like protein [Oryza sativa (...   218  1e-55
ref|NP_565491.1| expressed protein [Arabidopsis thaliana] gi|254...   209  6e-53
gb|AAM64943.1| unknown [Arabidopsis thaliana]                         207  3e-52
gb|AAQ19850.1| light-regulated chloroplast-localized protein [So...   207  3e-52
ref|NP_048481.1| similar to Synechoccystis 3-pyrophosphohydrolas...   125  2e-27

>gb|AAO72565.1| inositol phosphatase-like protein [Oryza sativa (japonica
           cultivar-group)] gi|34394010|dbj|BAC84034.1| inositol
           phosphatase-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 287

 Score =  218 bits (556), Expect = 1e-55
 Identities = 117/233 (50%), Positives = 158/233 (67%), Gaps = 3/233 (1%)
 Frame = +1

Query: 127 KAVATPVLAATFKPPTVAETKAKFLSGYNKPIASIYSTVLQELLVQQHFMRYSKNYQYNP 306
           ++V   V  A   PPTVAETK  FL  Y +PI SIYSTVLQELLVQQH MRY   YQY+ 
Sbjct: 45  RSVVRCVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDA 104

Query: 307 IFALGFVSVYEQILESL-SAEERGAIFKAYVDALGEDADKYKRDASALEQAANGLTPESL 483
           +FALGFV+VY+Q++E   S E+R AIFKAY+ AL ED ++Y+ DA  +E+ A      SL
Sbjct: 105 VFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSL 164

Query: 484 TP-NADGNEVQKALASISS-ASAAGAFSYNKFVAIGLFRLLELSGAKEPSALEKLVKAVG 657
              ++   E++  L  IS  A   G+FSY++F A+GLFRLLEL+ A EP+ L+KL  A+ 
Sbjct: 165 VEFSSKDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKLCAALN 224

Query: 658 VKPEAVNRDLLMYKGVLSKLAAAKELMREFVEREKRKQAERDAAKAAKAAGTE 816
           +   +V+RDL +Y+ +LSKL  AKEL++E+VEREK+K+ ER     +  A T+
Sbjct: 225 INKRSVDRDLDVYRNILSKLVQAKELLKEYVEREKKKREERSETPKSNEAVTK 277

>ref|NP_565491.1| expressed protein [Arabidopsis thaliana] gi|25412000|pir||F84594
           hypothetical protein At2g20890 [imported] - Arabidopsis
           thaliana gi|4454459|gb|AAD20906.1| expressed protein
           [Arabidopsis thaliana] gi|17065446|gb|AAL32877.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20148535|gb|AAM10158.1| unknown protein [Arabidopsis
           thaliana]
          Length = 300

 Score =  209 bits (533), Expect = 6e-53
 Identities = 110/220 (50%), Positives = 159/220 (72%), Gaps = 3/220 (1%)
 Frame = +1

Query: 169 PTVAETKAKFLSGYNKPIASIYSTVLQELLVQQHFMRYSKNYQYNPIFALGFVSVYEQIL 348
           P V+ETK+KFL  Y +PI SIY+TVLQEL+VQQH MRY K Y+Y+P+FALGFV+VY+Q++
Sbjct: 65  PPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLM 124

Query: 349 ESL-SAEERGAIFKAYVDALGEDADKYKRDASALEQAANGLTPESLTP-NADGNEVQKAL 522
           E   S ++R AIFKAY++AL ED  +Y+ DA  +E+ A   T  SL   ++   +++  L
Sbjct: 125 EGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVL 184

Query: 523 ASISS-ASAAGAFSYNKFVAIGLFRLLELSGAKEPSALEKLVKAVGVKPEAVNRDLLMYK 699
             I+  A +   FSY++F A+GLFRLLEL+ A +P+ L+KL  ++ +  ++V+RDL +Y+
Sbjct: 185 KDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYR 244

Query: 700 GVLSKLAAAKELMREFVEREKRKQAERDAAKAAKAAGTES 819
            +LSKL  AKEL++E+VEREK+KQ ER  A++ KA  T S
Sbjct: 245 NLLSKLVQAKELLKEYVEREKKKQGER--AQSQKANETIS 282

>gb|AAM64943.1| unknown [Arabidopsis thaliana]
          Length = 300

 Score =  207 bits (527), Expect = 3e-52
 Identities = 109/220 (49%), Positives = 158/220 (71%), Gaps = 3/220 (1%)
 Frame = +1

Query: 169 PTVAETKAKFLSGYNKPIASIYSTVLQELLVQQHFMRYSKNYQYNPIFALGFVSVYEQIL 348
           P V+ETK+KFL  Y +PI SIY+TVLQEL+VQQH MRY K Y+Y+P+FALGFV+VY+Q++
Sbjct: 65  PPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLM 124

Query: 349 ESL-SAEERGAIFKAYVDALGEDADKYKRDASALEQAANGLTPESLTP-NADGNEVQKAL 522
           E   S ++R AIFKAY++AL ED  +Y+ DA  +E+ A   T  SL   ++   +++  L
Sbjct: 125 EGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVL 184

Query: 523 ASISS-ASAAGAFSYNKFVAIGLFRLLELSGAKEPSALEKLVKAVGVKPEAVNRDLLMYK 699
             I+  A +   FSY++F A+GLFRLLEL+ A +P+ L+KL  ++ +  ++V+RDL +Y+
Sbjct: 185 KDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKLCASLNINKKSVDRDLDVYR 244

Query: 700 GVLSKLAAAKELMREFVEREKRKQAERDAAKAAKAAGTES 819
            +LSKL  A EL++E+VEREK+KQ ER  A++ KA  T S
Sbjct: 245 NLLSKLVQANELLKEYVEREKKKQEER--AQSQKANETIS 282

>gb|AAQ19850.1| light-regulated chloroplast-localized protein [Solanum tuberosum]
          Length = 293

 Score =  207 bits (527), Expect = 3e-52
 Identities = 105/212 (49%), Positives = 151/212 (70%), Gaps = 3/212 (1%)
 Frame = +1

Query: 169 PTVAETKAKFLSGYNKPIASIYSTVLQELLVQQHFMRYSKNYQYNPIFALGFVSVYEQIL 348
           PTVA+TK KFL+ Y +PI ++Y+TVLQEL+VQQH  RY K+YQY+P+FALGFV+VY+Q++
Sbjct: 66  PTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFVTVYDQLM 125

Query: 349 ESL-SAEERGAIFKAYVDALGEDADKYKRDASALEQAANGLTPESLTP-NADGNEVQKAL 522
           E   S E+R AIFKAY++AL ED ++Y+ DA  LE+ A      +L   ++   E++   
Sbjct: 126 EGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKEGEIENIF 185

Query: 523 ASISS-ASAAGAFSYNKFVAIGLFRLLELSGAKEPSALEKLVKAVGVKPEAVNRDLLMYK 699
             I+  A     F Y++  A+GLFRLLEL+   +P+ LEKL  A+ V  ++V+RDL +Y+
Sbjct: 186 KDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKKSVDRDLDVYR 245

Query: 700 GVLSKLAAAKELMREFVEREKRKQAERDAAKA 795
            +LSKL  AKEL++E+VEREK+K+ ER+  KA
Sbjct: 246 NLLSKLVQAKELLKEYVEREKKKRGERETQKA 277

>ref|NP_048481.1| similar to Synechoccystis 3-pyrophosphohydrolase, corresponds to
           GenBank Accession Number D90911 [Paramecium bursaria
           Chlorella virus 1] gi|7461277|pir||T17623 hypothetical
           protein A133R - Chlorella virus PBCV-1
           gi|1131477|gb|AAC96501.1| similar to Synechoccystis
           3-pyrophosphohydrolase, corresponds to GenBank Accession
           Number D90911 [Paramecium bursaria Chlorella virus 1]
          Length = 207

 Score =  125 bits (313), Expect = 2e-27
 Identities = 64/209 (30%), Positives = 124/209 (58%)
 Frame = +1

Query: 151 AATFKPPTVAETKAKFLSGYNKPIASIYSTVLQELLVQQHFMRYSKNYQYNPIFALGFVS 330
           A T  PPTV++TK  F + Y K +  +Y+T +Q +LV+QH  RY+KNY Y+ + ALG V+
Sbjct: 3   AITTSPPTVSDTKRIFYANYKKLLLPLYNTPIQNMLVKQHIHRYNKNYTYSDVSALGIVT 62

Query: 331 VYEQILESLSAEERGAIFKAYVDALGEDADKYKRDASALEQAANGLTPESLTPNADGNEV 510
             + +L +   +E+ +I  A++ +L ED + Y  +  +L+  A       L PN  GN +
Sbjct: 63  TLDSVLNTFPDDEKTSIKNAFIISLNEDPEMYYSNIESLKPYAKS---SHLGPNKHGNTL 119

Query: 511 QKALASISSASAAGAFSYNKFVAIGLFRLLELSGAKEPSALEKLVKAVGVKPEAVNRDLL 690
           QK+L  I   +    + Y+ F A+G+F+LL+++G    ++++ L +++G K E V++D+ 
Sbjct: 120 QKSLYDI---AINDKYVYSSFAAVGIFKLLQMNGNYTGNSVKHLSESIGFKGELVHKDIA 176

Query: 691 MYKGVLSKLAAAKELMREFVEREKRKQAE 777
            +  +L  + ++++L  +  E   +++++
Sbjct: 177 TFFSLLKYIESSQKLADDIREESLKRKSK 205



EST assemble image


clone accession position
1 LC041b07_r AV621803 1 603
2 CM007d05_r AV386811 54 598
3 HCL048g05_r AV642270 56 325
4 LCL062c02_r AV629624 63 510
5 MX222e12_r BP090347 115 408
6 CM053b09_r AV389894 311 541
7 CM003g12_r AV386622 322 861
8 LC072c03_r AV624049 584 1012
9 LC046c03_r AV622182 843 1363




Chlamydomonas reinhardtii
Kazusa DNA Research Institute