KCC000922A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC000922A_C01 KCC000922A_c01
ACGGTCAACAACTAGTGCGCATACGCTGTCTCTAGAATTGTTGCTTGTAGAACCTGCTGG
TCAAGTCAGGAAGATGTTGGTCCACCGGCAGTGCACGCCAGTGCGGGTCCAGCCGCCGAA
GCACCTGGCACGGCGAGCTGTGCTGCTCCCTGCACGTCGTGGTGTCGCGGTGGCGCGTGC
AGAAGCTGCTCCAGGGCTAGTGGCGACGGAGGCGCCCCCGCACGCCATCACGCTGACGCC
AGAGGCCCTCGTGCAGCTGCGCAAGCTGCGCGCAGACTTTAAGGAACAGAGCGAGGCCAT
GCTGCTGCGCGTGGGCGTGAAGCAAGGCGGCTGCTCGGGTATGTCGTACGTGATGGACTT
CGAGTCTCAGGACAAGGTGACGGACGACGACCACGTCATCTCGTACGATGACGGCTTCCG
CCTGGTGGTGGACCCCAAGTCGCTGCTGTACCTGTTCGGCATGCAGCTGGGCTACTCCAC
GGCGCTCATCGGCGGCGGCTTCCAGTTCCAGAACCCCAACGCCACCGACTCGTGC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000922A_C01 KCC000922A_c01
(535 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172520.1| expressed protein [Arabidopsis thaliana] 128 4e-29
sp|Q9XIK3|Y105_ARATH Hypothetical protein At1g10500 gi|25310105|... 122 3e-27
ref|NP_486425.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2... 121 7e-27
ref|ZP_00111918.1| COG0316: Uncharacterized conserved protein [N... 117 1e-25
ref|NP_440066.1| hypothetical protein [Synechocystis sp. PCC 680... 114 6e-25
>ref|NP_172520.1| expressed protein [Arabidopsis thaliana]
Length = 180
Score = 128 bits (322), Expect = 4e-29
Identities = 68/127 (53%), Positives = 83/127 (64%)
Frame = +2
Query: 155 RRGVAVARAEAAPGLVATEAPPHAITLTPEALVQLRKLRADFKEQSEAMLLRVGVKQGGC 334
RR R+ + P A E AI+L+ AL L K+R+ E+ E + LR+GVKQGGC
Sbjct: 48 RRNRLSVRSASVPAAPAMEGLKPAISLSENALKHLSKMRS---ERGEDLCLRIGVKQGGC 104
Query: 335 SGMSYVMDFESQDKVTDDDHVISYDDGFRLVVDPKSLLYLFGMQLGYSTALIGGGFQFQN 514
SGMSY MDFE++ DD I Y GF +V DPKS+L+LFGMQL YS ALIGGGF F N
Sbjct: 105 SGMSYTMDFENRANARPDDSTIEYQ-GFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFSN 163
Query: 515 PNATDSC 535
PNAT +C
Sbjct: 164 PNATQTC 170
>sp|Q9XIK3|Y105_ARATH Hypothetical protein At1g10500 gi|25310105|pir||F86238 protein
T10O24.11 [imported] - Arabidopsis thaliana
gi|5091542|gb|AAD39571.1|AC007067_11 T10O24.11
[Arabidopsis thaliana]
Length = 116
Score = 122 bits (306), Expect = 3e-27
Identities = 62/104 (59%), Positives = 75/104 (71%)
Frame = +2
Query: 224 AITLTPEALVQLRKLRADFKEQSEAMLLRVGVKQGGCSGMSYVMDFESQDKVTDDDHVIS 403
AI+L+ AL L K+R+ E+ E + LR+GVKQGGCSGMSY MDFE++ DD I
Sbjct: 7 AISLSENALKHLSKMRS---ERGEDLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIE 63
Query: 404 YDDGFRLVVDPKSLLYLFGMQLGYSTALIGGGFQFQNPNATDSC 535
Y GF +V DPKS+L+LFGMQL YS ALIGGGF F NPNAT +C
Sbjct: 64 YQ-GFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFSNPNATQTC 106
>ref|NP_486425.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25310158|pir||AB2104
hypothetical protein alr2385 [imported] - Nostoc sp.
(strain PCC 7120) gi|17131477|dbj|BAB74084.1|
ORF_ID:alr2385~hypothetical protein [Nostoc sp. PCC
7120]
Length = 118
Score = 121 bits (303), Expect = 7e-27
Identities = 59/111 (53%), Positives = 81/111 (72%)
Frame = +2
Query: 203 ATEAPPHAITLTPEALVQLRKLRADFKEQSEAMLLRVGVKQGGCSGMSYVMDFESQDKVT 382
AT++ I L+ AL Q++ L+ ++Q + + LRVGV+QGGCSGMSY+MDFE + ++T
Sbjct: 4 ATQSQQSGILLSEAALRQVKSLQ---EKQGQDLCLRVGVRQGGCSGMSYMMDFEQESQIT 60
Query: 383 DDDHVISYDDGFRLVVDPKSLLYLFGMQLGYSTALIGGGFQFQNPNATDSC 535
D V YD GF++V D KS+LYL+G+ L YS A+IGGGFQF NPNAT +C
Sbjct: 61 PQDEVFDYD-GFKIVCDRKSILYLYGLMLDYSDAMIGGGFQFTNPNATQTC 110
>ref|ZP_00111918.1| COG0316: Uncharacterized conserved protein [Nostoc punctiforme]
Length = 118
Score = 117 bits (292), Expect = 1e-25
Identities = 60/111 (54%), Positives = 75/111 (67%)
Frame = +2
Query: 203 ATEAPPHAITLTPEALVQLRKLRADFKEQSEAMLLRVGVKQGGCSGMSYVMDFESQDKVT 382
A ++ I L+ AL Q++ LR +Q LRVGV+QGGCSGMSY+MDFE K+T
Sbjct: 4 AIQSQQRGILLSEAALHQVKSLR---DKQGTDFCLRVGVRQGGCSGMSYMMDFEDTSKIT 60
Query: 383 DDDHVISYDDGFRLVVDPKSLLYLFGMQLGYSTALIGGGFQFQNPNATDSC 535
D V YD GF++V D KSLLYL+G+ L YS A+IGGGFQF NPNA +C
Sbjct: 61 PQDEVFDYD-GFKIVSDRKSLLYLYGLMLDYSDAMIGGGFQFTNPNANQTC 110
>ref|NP_440066.1| hypothetical protein [Synechocystis sp. PCC 6803]
gi|2495209|sp|P72731|YE17_SYNY3 Hypothetical protein
slr1417 gi|7446872|pir||S74594 hypothetical protein
slr1417 - Synechocystis sp. (strain PCC 6803)
gi|1651819|dbj|BAA16746.1| ORF_ID:slr1417~hypothetical
protein [Synechocystis sp. PCC 6803]
Length = 118
Score = 114 bits (286), Expect = 6e-25
Identities = 58/111 (52%), Positives = 76/111 (68%)
Frame = +2
Query: 203 ATEAPPHAITLTPEALVQLRKLRADFKEQSEAMLLRVGVKQGGCSGMSYVMDFESQDKVT 382
AT I L+ AL L L+ ++Q + + LRVGV+QGGCSGMSY+MDFE ++ T
Sbjct: 4 ATATQAKGIQLSDAALKHLLALK---EQQGKDLCLRVGVRQGGCSGMSYMMDFEEPNRAT 60
Query: 383 DDDHVISYDDGFRLVVDPKSLLYLFGMQLGYSTALIGGGFQFQNPNATDSC 535
+ D V Y+ GF+++ D KSLLYL+G+ L YS ALIGGGFQF NPNA +C
Sbjct: 61 EHDEVFDYE-GFQIICDRKSLLYLYGLMLDYSNALIGGGFQFTNPNANQTC 110
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
CM003d02_r |
AV386551 |
1 |
468 |
2 |
HC022a03_r |
AV633541 |
1 |
481 |
3 |
HC058g05_r |
AV636381 |
13 |
535 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute