Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000916A_C01 KCC000916A_c01
(524 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T07733 probable chaperonin 60 beta chain precursor, chlorop... 210 8e-54
ref|NP_187956.1| chaperonin, putative [Arabidopsis thaliana] gi|... 209 2e-53
sp|P21241|RUBB_BRANA RuBisCO subunit binding-protein beta subuni... 207 7e-53
ref|NP_175945.1| RuBisCo subunit binding-protein beta subunit/60... 207 7e-53
dbj|BAA92724.1| ESTs C99033(E4350),C99032(E4350),D46006(S10372),... 207 7e-53
>pir||T07733 probable chaperonin 60 beta chain precursor, chloroplast (clone
potbchap1) - potato gi|1762130|gb|AAB39827.1|
chaperonin-60 beta subunit
Length = 599
Score = 210 bits (535), Expect = 8e-54
Identities = 108/162 (66%), Positives = 131/162 (80%)
Frame = +1
Query: 37 MAGTQMRSFQAKSAASARGAVRGRRSVVVQAAKELHFNRNMEALKKMQAGVDKLATVVGV 216
+A SF +K + R + RR ++ AAKELHFN++ A+KK+Q GV+KLA +VGV
Sbjct: 27 VANISSTSFGSKRNVALR---KSRRPTILAAAKELHFNKDGSAIKKLQNGVNKLADLVGV 83
Query: 217 TIGPKGRNVVLESKFGSPKIVNDGVTIAREVELEDPVENIGAKLVRQAAARTNDTAGDGT 396
T+GPKGRNVVLESK+G+PKIVNDGVT+AREVELEDPVENIGAKLVRQAAA+TND AGDGT
Sbjct: 84 TLGPKGRNVVLESKYGAPKIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGT 143
Query: 397 TTATVLSAAFIAEGMKIVAAGTNPVQLTRGMEKTVNALVKEL 522
TT+ VL+ IAEG+K+VAAG NPV +TRG+EKT ALV EL
Sbjct: 144 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVAEL 185
>ref|NP_187956.1| chaperonin, putative [Arabidopsis thaliana]
gi|9280299|dbj|BAB01754.1| GloEL protein; chaperonin, 60
kDa [Arabidopsis thaliana]
Length = 596
Score = 209 bits (532), Expect = 2e-53
Identities = 104/142 (73%), Positives = 123/142 (86%)
Frame = +1
Query: 97 VRGRRSVVVQAAKELHFNRNMEALKKMQAGVDKLATVVGVTIGPKGRNVVLESKFGSPKI 276
VR R +V AAKELHFN++ ++K+Q GV+KLA +VGVT+GPKGRNVVLESK+GSP+I
Sbjct: 41 VRRSRPAIVCAAKELHFNKDGTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRI 100
Query: 277 VNDGVTIAREVELEDPVENIGAKLVRQAAARTNDTAGDGTTTATVLSAAFIAEGMKIVAA 456
VNDGVT+AREVELEDPVENIGAKLVRQAAA+TND AGDGTTT+ VL+ FIAEG+K+VAA
Sbjct: 101 VNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAA 160
Query: 457 GTNPVQLTRGMEKTVNALVKEL 522
G NPV +TRG+EKT ALV EL
Sbjct: 161 GANPVLITRGIEKTAKALVNEL 182
>sp|P21241|RUBB_BRANA RuBisCO subunit binding-protein beta subunit, chloroplast precursor
(60 kDa chaperonin beta subunit) (CPN-60 beta)
gi|99800|pir||PW0007 chaperonin 62.5K beta chain - rape
gi|167117|gb|AAA32980.1| 60-kDa beta-polypeptide of
plastid chaperonin-60 precursor
Length = 588
Score = 207 bits (527), Expect = 7e-53
Identities = 106/141 (75%), Positives = 124/141 (87%), Gaps = 2/141 (1%)
Frame = +1
Query: 106 RRS--VVVQAAKELHFNRNMEALKKMQAGVDKLATVVGVTIGPKGRNVVLESKFGSPKIV 279
RRS VV AAKELHFN++ ++K+QAGV+KLA +VGVT+GPKGRNVVLESK+GSP+IV
Sbjct: 46 RRSSPAVVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIV 105
Query: 280 NDGVTIAREVELEDPVENIGAKLVRQAAARTNDTAGDGTTTATVLSAAFIAEGMKIVAAG 459
NDGVT+AREVELEDPVENIGAKLVRQAAA+TND AGDGTTT+ VL+ FIAEG+K+VAAG
Sbjct: 106 NDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAG 165
Query: 460 TNPVQLTRGMEKTVNALVKEL 522
NPV +TRG+EKT ALV EL
Sbjct: 166 ANPVLITRGIEKTAKALVAEL 186
>ref|NP_175945.1| RuBisCo subunit binding-protein beta subunit/60 kDa chaperonin beta
subunit [Arabidopsis thaliana]
gi|30695947|ref|NP_849811.1| RuBisCo subunit
binding-protein beta subunit/60 kDa chaperonin beta
subunit [Arabidopsis thaliana]
gi|27735252|sp|P21240|RUBB_ARATH RuBisCO subunit
binding-protein beta subunit, chloroplast precursor (60
kDa chaperonin beta subunit) (CPN-60 beta)
gi|25300374|pir||B96597 Rubisco subunit binding-protein
beta subunit [imported] - Arabidopsis thaliana
gi|4204266|gb|AAD10647.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|14423416|gb|AAK62390.1|AF386945_1 Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|20148345|gb|AAM10063.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
Length = 600
Score = 207 bits (527), Expect = 7e-53
Identities = 103/141 (73%), Positives = 123/141 (87%)
Frame = +1
Query: 100 RGRRSVVVQAAKELHFNRNMEALKKMQAGVDKLATVVGVTIGPKGRNVVLESKFGSPKIV 279
R S +V AAKELHFN++ ++++QAGV+KLA +VGVT+GPKGRNVVLESK+GSP+IV
Sbjct: 46 RRSSSAIVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIV 105
Query: 280 NDGVTIAREVELEDPVENIGAKLVRQAAARTNDTAGDGTTTATVLSAAFIAEGMKIVAAG 459
NDGVT+AREVELEDPVENIGAKLVRQAAA+TND AGDGTTT+ VL+ FIAEG+K+VAAG
Sbjct: 106 NDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAG 165
Query: 460 TNPVQLTRGMEKTVNALVKEL 522
NPV +TRG+EKT ALV EL
Sbjct: 166 ANPVLITRGIEKTAKALVTEL 186
>dbj|BAA92724.1| ESTs C99033(E4350),C99032(E4350),D46006(S10372),
D47177(S12347),C28582(C61678),C27203(C51329) correspond
to a region of the predicted gene.~Similar to
Arabidopsis thaliana chromosome I BAC T5A14 genomic
sequence; 60 KD Chaperonin Beta subunit (AC005223)
[Oryza sativa (japonica cultivar-group)]
Length = 601
Score = 207 bits (527), Expect = 7e-53
Identities = 102/134 (76%), Positives = 122/134 (90%)
Frame = +1
Query: 121 VQAAKELHFNRNMEALKKMQAGVDKLATVVGVTIGPKGRNVVLESKFGSPKIVNDGVTIA 300
V+AAKEL+FN++ A+KK+Q GV+KLA +VGVT+GPKGRNVVLESK+GSP+IVNDGVT+A
Sbjct: 54 VKAAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVA 113
Query: 301 REVELEDPVENIGAKLVRQAAARTNDTAGDGTTTATVLSAAFIAEGMKIVAAGTNPVQLT 480
REVELEDPVENIGAKLVRQAAA+TND AGDGTTT+ VL+ IAEG+K+VAAG NPVQ+T
Sbjct: 114 REVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQIT 173
Query: 481 RGMEKTVNALVKEL 522
RG+EKT ALV+EL
Sbjct: 174 RGIEKTAKALVEEL 187
