KCC000914A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000914A_C01 KCC000914A_c01
cgcagtcgcaGCTATAACTCAACACTTGCACACAAGGCACTCAGGCCCTTCGCTCGATAT
AACGCTCACTGTCTCTCAAGATGGCCCCCAAGCTGTATTATTTTGCCATTCCCGGGCGCG
GAGAGGTTGCGCGCCTGTTGTTCCACATCGGCAACGTTCAGTTCGAGGACGTGCGTATCG
ATGGGCCCACCTGGCCGGAGCAGAAGTCAAAGTTCCCATTTGGCCAGGTGCCGGTGCTGG
AGCTGGACGACGGGCGCATGCTGGCTCAGAGCGGTGCCATTGGCCGCTATGTGGCGAAGC
TGGCGGGTCTGTACCCGGAGGACCCCATCCAGGCGGCGTTTGCGGACCAGGCCGTGTTCC
TGGTTCAGGACGTCTGGGATGCCACCCTGATGCCCTCATTCTCCCTACCGGCTGAGGAGA
GGGCCAAGGCCCGGCAAGACGCCCTGGCAGGCAAGGGCGGAGACAAGCTGAAGCAAATGG
AGAAGCTGCTGGAGCCGGTAGAGAAGAGCGGCGGCTGGGTGGCGGGCGGCGACAAGATGA
GTTTCGCTGACCTGGGAGATTACGTGTTGGCTTCCAACTCTGTTGTGGTTTCGTGGGTTC
CCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000914A_C01 KCC000914A_c01
         (603 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP79878.1| glutathione S-transferase [Solenopsis invicta]          96  4e-19
sp|O73888|PGD2_CHICK Glutathione-requiring prostaglandin D synth...    92  7e-18
sp|P46436|GTS1_ASCSU GLUTATHIONE S-TRANSFERASE 1 (GST CLASS-SIGM...    89  6e-17
gb|AAN85429.1| glutathione-S-transferase [Pyrocystis lunula]           86  3e-16
ref|NP_496858.1| glutathione S-Transferase (gst-20) [Caenorhabdi...    85  7e-16

>gb|AAP79878.1| glutathione S-transferase [Solenopsis invicta]
          Length = 202

 Score = 95.9 bits (237), Expect = 4e-19
 Identities = 57/155 (36%), Positives = 87/155 (55%), Gaps = 1/155 (0%)
 Frame = +3

Query: 90  KLYYFAIPGRGEVARLLFHIGNVQFEDVRIDGPTWPEQKSKFPFGQVPVLELDDGRMLAQ 269
           KL YF + G GE  R + H   ++FEDVR++   WP+ K   P GQ+P+LE+ DG++  Q
Sbjct: 5   KLTYFNVAGLGESLRYMLHHCGIKFEDVRVEFDDWPKLKPNMPMGQMPILEI-DGKIYHQ 63

Query: 270 SGAIGRYVAKLAGLYPEDPIQAAFADQAVFLVQDVWDATLMPSFSLPAEERAKARQDALA 449
           S AIGRY+AK   LY  D ++A   D  +  + D+  A     +      +AK ++ A  
Sbjct: 64  SRAIGRYIAKKGNLYGSDELEAMEIDATIDSMDDIRQALSTYYWEQDPAFKAKLKETAF- 122

Query: 450 GKGGDKLK-QMEKLLEPVEKSGGWVAGGDKMSFAD 551
               +KL   ++K    V+K+GG+  GG K+S+AD
Sbjct: 123 ----EKLPFYLDKFEAQVKKNGGYFVGG-KLSWAD 152

>sp|O73888|PGD2_CHICK Glutathione-requiring prostaglandin D synthase
           (Glutathione-dependent PGD synthetase) (Prostaglandin-H2
           D-isomerase) (Hematopoietic prostaglandin D synthase)
           (H-PGDS) gi|3204175|emb|CAA07005.1| prostaglandin-D
           synthase [Gallus gallus]
          Length = 199

 Score = 91.7 bits (226), Expect = 7e-18
 Identities = 51/134 (38%), Positives = 76/134 (56%)
 Frame = +3

Query: 90  KLYYFAIPGRGEVARLLFHIGNVQFEDVRIDGPTWPEQKSKFPFGQVPVLELDDGRMLAQ 269
           KL YF + GR E+ R LF    +++ED R++G  WP+ K   PFG+VP+LE+ DG ++ Q
Sbjct: 5   KLTYFNLRGRAEICRYLFAYAGIKYEDHRLEGADWPKIKPTIPFGKVPILEV-DGVIIHQ 63

Query: 270 SGAIGRYVAKLAGLYPEDPIQAAFADQAVFLVQDVWDATLMPSFSLPAEERAKARQDALA 449
           S AI RY+A+ +GL  + P++ A AD  V  + D     L P      + + KA  D L 
Sbjct: 64  SLAIARYLARESGLAGQTPVEQALADAIVDTIDDF--MMLFPWAEKNQDVKEKAFNDILT 121

Query: 450 GKGGDKLKQMEKLL 491
            K  + LK ++  L
Sbjct: 122 NKAPELLKDLDTFL 135

>sp|P46436|GTS1_ASCSU GLUTATHIONE S-TRANSFERASE 1 (GST CLASS-SIGMA) gi|539417|pir||S38626
           glutathione transferase (EC 2.5.1.18) GST1 - pig
           roundworm gi|415921|emb|CAA53218.1| glutathione
           transferase; glutathione-S-transferase [Ascaris suum]
           gi|632741|gb|AAB30767.1| glutathione S-transferase,
           AsGST1 [Ascaris suum, uterus and ovary, Peptide, 206 aa]
           gi|1805650|emb|CAA71620.1| glutathione S-transferase
           [Ascaris suum]
          Length = 206

 Score = 88.6 bits (218), Expect = 6e-17
 Identities = 62/159 (38%), Positives = 85/159 (52%), Gaps = 4/159 (2%)
 Frame = +3

Query: 90  KLYYFAIPGRGEVARLLFHIGNVQFEDVRIDGPTWPEQKSKFPFGQVPVLELDDGRMLAQ 269
           KL YF I G GE ARL+FH   V+FED R+    WP  K K PFGQ+P+LE+ DG +LAQ
Sbjct: 5   KLTYFDIRGLGEGARLIFHQAGVKFEDNRLKREDWPALKPKTPFGQLPLLEV-DGEVLAQ 63

Query: 270 SGAIGRYVAKLAGLYPEDPIQAAFADQAVFLVQDVWDATLMPSFSLPA----EERAKARQ 437
           S AI RY+ +  GL  + P++ A  D      +D + A L P F + A     ++ K  +
Sbjct: 64  SAAIYRYLGRQFGLAGKTPMEEAQVDSIFDQFKD-FMAELRPCFRVLAGFEEGDKEKVLK 122

Query: 438 DALAGKGGDKLKQMEKLLEPVEKSGGWVAGGDKMSFADL 554
           +         L  +EK L    KSG     G  +++ADL
Sbjct: 123 EVAVPARDKHLPLLEKFL---AKSGSEYMVGKSVTWADL 158

>gb|AAN85429.1| glutathione-S-transferase [Pyrocystis lunula]
          Length = 310

 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 63/165 (38%), Positives = 86/165 (51%), Gaps = 2/165 (1%)
 Frame = +3

Query: 90  KLYYFAIPGRGEVARLLFHIGNVQFEDVRIDGPT-WPEQKSKFPFGQVPVLELDDGRMLA 266
           K  YF + G GE  RL F +G V + D RID  T W + K   PFGQ+PV+ +D  + +A
Sbjct: 90  KFTYFTVEGGGECIRLAFALGGVPYIDDRIDMATQWKDMKPTTPFGQLPVMTVDGSKQIA 149

Query: 267 QSGAIGRYVAKLAGLYPEDPIQAAFADQAVFLVQDVWDATLMPSFSLPAEERAKARQDAL 446
           QS  + R   KLAGL PEDP++   A++ V L  D+ DA + PS  L        R+  L
Sbjct: 150 QSQGMLRLACKLAGLIPEDPVEFLKAEEVVGLSWDMVDA-ITPSMQLD-------RRPYL 201

Query: 447 AGKGGDKLKQM-EKLLEPVEKSGGWVAGGDKMSFADLGDYVLASN 578
            G  G  L+Q+ +K +E  EK       G+   F    D +LA N
Sbjct: 202 YGCEGLPLEQLTKKAVEMREKLS--APDGEINRFLGYLDGLLAKN 244

>ref|NP_496858.1| glutathione S-Transferase (gst-20) [Caenorhabditis elegans]
           gi|7510009|pir||T21905 hypothetical protein Y48E1B.10 -
           Caenorhabditis elegans gi|31044411|emb|CAB02297.3| C.
           elegans GST-20 protein (corresponding sequence
           Y48E1B.10) [Caenorhabditis elegans]
           gi|31044412|emb|CAB07700.3| C. elegans GST-20 protein
           (corresponding sequence Y48E1B.10) [Caenorhabditis
           elegans]
          Length = 207

 Score = 85.1 bits (209), Expect = 7e-16
 Identities = 43/96 (44%), Positives = 58/96 (59%)
 Frame = +3

Query: 90  KLYYFAIPGRGEVARLLFHIGNVQFEDVRIDGPTWPEQKSKFPFGQVPVLELDDGRMLAQ 269
           K YYF   G G+V+R LF +   ++ED+RI+   WP QK K PFGQ+PVLEL  G  + Q
Sbjct: 5   KFYYFNGRGLGDVSRQLFALSGTKYEDIRIEHADWPAQKPKMPFGQMPVLELSSGLQIPQ 64

Query: 270 SGAIGRYVAKLAGLYPEDPIQAAFADQAVFLVQDVW 377
           S AI RY+AK  G   +   +AA AD  +   +D +
Sbjct: 65  SMAIARYLAKKFGYAGKTDEEAALADALIDQFKDFY 100



EST assemble image


clone accession position
1 MX023a01_r BP087017 1 388
2 HC034h09_r AV634558 11 479
3 CM002g06_r AV397851 29 502
4 CM028h05_r AV387676 29 607
5 CM022d07_r AV387899 32 575
6 MX207g05_r BP089460 35 391
7 MX042f09_r BP087741 36 385
8 MX237b10_r BP091340 39 329
9 MX033e06_r BP087387 44 489
10 MXL010a05_r BP093551 48 350
11 MX240e09_r BP091532 68 337
12 MX238b02_r BP091397 81 370
13 MX058e08_r BP088354 119 568




Chlamydomonas reinhardtii
Kazusa DNA Research Institute