Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000912A_C02 KCC000912A_c02
(570 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_488842.1| 30S ribosomal protein S6 [Nostoc sp. PCC 7120] ... 57 2e-07
ref|ZP_00110645.1| COG0360: Ribosomal protein S6 [Nostoc punctif... 56 4e-07
ref|NP_441001.1| 30S ribosomal protein S6 [Synechocystis sp. PCC... 54 1e-06
ref|NP_682069.1| 30S ribosomal protein S6 [Thermosynechococcus e... 54 1e-06
ref|NP_898600.1| 30S ribosomal protein S6 [Synechococcus sp. WH ... 54 2e-06
>ref|NP_488842.1| 30S ribosomal protein S6 [Nostoc sp. PCC 7120]
gi|24212311|sp|Q8YMX2|RS6_ANASP 30S ribosomal protein S6
gi|25530230|pir||AB2406 30S ribosomal protein S6
[imported] - Nostoc sp. (strain PCC 7120)
gi|17133939|dbj|BAB76501.1| 30S ribosomal protein S6
[Nostoc sp. PCC 7120]
Length = 108
Score = 56.6 bits (135), Expect = 2e-07
Identities = 28/93 (30%), Positives = 56/93 (60%)
Frame = +1
Query: 274 YETMIILKPTLSDEERDRELAKFEAYLNKEECFNINALVRGRSKLAYPIKKEWEGIYVLY 453
YET+ IL+P L+DE+ + +AK++ L ++ ++ RG+ +LAY IKK+ +G YV +
Sbjct: 5 YETLYILRPDLTDEQVELAIAKYQNLLQEQGATDLEVQNRGKRRLAYEIKKQRDGFYVQF 64
Query: 454 SYLARRQTARAVQQLLSNPEAGAEDTVLRHITL 552
+Y A + +++ + + V+R++T+
Sbjct: 65 NYNAPGKAIAILERAMR-----LSEEVIRYLTV 92
>ref|ZP_00110645.1| COG0360: Ribosomal protein S6 [Nostoc punctiforme]
Length = 129
Score = 55.8 bits (133), Expect = 4e-07
Identities = 29/93 (31%), Positives = 51/93 (54%)
Frame = +1
Query: 274 YETMIILKPTLSDEERDRELAKFEAYLNKEECFNINALVRGRSKLAYPIKKEWEGIYVLY 453
YETM IL+P L DE+ ++ + K++ L + +I RG+ +LAY IKK +GIY+
Sbjct: 18 YETMYILRPDLGDEQAEQAITKYQNLLRDQGAEDIQIQNRGKRRLAYEIKKHRDGIYIQL 77
Query: 454 SYLARRQTARAVQQLLSNPEAGAEDTVLRHITL 552
+Y A ++ + + V+R++T+
Sbjct: 78 NYTAPATAIAPFERAMR-----LSEEVIRYLTI 105
>ref|NP_441001.1| 30S ribosomal protein S6 [Synechocystis sp. PCC 6803]
gi|2500413|sp|P73636|RS6_SYNY3 30S ribosomal protein S6
gi|7440201|pir||S77123 ribosomal protein S6 -
Synechocystis sp. (strain PCC 6803)
gi|1652762|dbj|BAA17681.1| 30S ribosomal protein S6
[Synechocystis sp. PCC 6803]
Length = 113
Score = 54.3 bits (129), Expect = 1e-06
Identities = 26/93 (27%), Positives = 53/93 (56%)
Frame = +1
Query: 274 YETMIILKPTLSDEERDRELAKFEAYLNKEECFNINALVRGRSKLAYPIKKEWEGIYVLY 453
YE M+IL+P L++E +E+ K++ +L ++ V G+ +LAY I++ +GIYVL+
Sbjct: 6 YELMVILRPDLNEERVSQEVTKYQEFLTNNAAEEVSVKVWGKRRLAYQIRRFNDGIYVLF 65
Query: 454 SYLARRQTARAVQQLLSNPEAGAEDTVLRHITL 552
++ Q +++ + D V+R +++
Sbjct: 66 NFNGEGQQIALIER-----DMRLNDNVMRFLSI 93
>ref|NP_682069.1| 30S ribosomal protein S6 [Thermosynechococcus elongatus BP-1]
gi|32171538|sp|Q8DJE6|RS6_SYNEL 30S ribosomal protein S6
gi|22295003|dbj|BAC08831.1| 30S ribosomal protein S6
[Thermosynechococcus elongatus BP-1]
Length = 114
Score = 54.3 bits (129), Expect = 1e-06
Identities = 22/64 (34%), Positives = 41/64 (63%)
Frame = +1
Query: 274 YETMIILKPTLSDEERDRELAKFEAYLNKEECFNINALVRGRSKLAYPIKKEWEGIYVLY 453
YET+ I++P + +E+ ++ +++F +L ++ + RG+ + AYPIKK EG Y+L
Sbjct: 6 YETLYIIRPDVGEEQLEQTISQFRTFLEEQGATKLKVQNRGKRRFAYPIKKLREGYYILM 65
Query: 454 SYLA 465
+Y A
Sbjct: 66 TYTA 69
>ref|NP_898600.1| 30S ribosomal protein S6 [Synechococcus sp. WH 8102]
gi|33639642|emb|CAE09026.1| 30S ribosomal protein S6
[Synechococcus sp. WH 8102]
Length = 127
Score = 53.5 bits (127), Expect = 2e-06
Identities = 30/94 (31%), Positives = 52/94 (54%)
Frame = +1
Query: 271 WYETMIILKPTLSDEERDRELAKFEAYLNKEECFNINALVRGRSKLAYPIKKEWEGIYVL 450
+YETM IL+P + +EE + L K+ L + ++ +RG+ +LAYPI K EGIYV
Sbjct: 6 YYETMYILRPDIPEEEVESHLTKYRDMLVEAGADVLDNQMRGKRRLAYPIDKHKEGIYVQ 65
Query: 451 YSYLARRQTARAVQQLLSNPEAGAEDTVLRHITL 552
S+ Q +++ + + V+R++T+
Sbjct: 66 LSHNGDGQQVAVLEKAMR-----LSEDVIRYLTV 94
