>KCC000893A_C01 KCC000893A_c01
gcaccaGAACCAACACAGGACAGACTATATGCTGTAACGAACTCTGGTGGAGTGGCCATT
CACTGGGGTCCGGGAAGCGTTCTCTCTCTGTAGTTCGGTGGGCGTCATCGGAGGGCAAGC
CAAGTCTAGGCGCTTACAAGCGCATAGCAATGTCACTCTACGGTCCAGGCCCAGGCGTCG
CTTCTCACACTGCATGTCTTGGACGGCGCTTTAGGCGACGCGAGGACAGAGCTGCCCGCC
CGCAGCAGGGTGTGTTACCAACACAGGACAGACTATATGCTGTAACGAACTCTGGTGGAG
TGGCCATTCACTGGGGTCCGGGAAGCATTCTCTCTCTGTAGTTCGGTGGGCGTCATCGGA
GGGCAAGCCAAGTCTAGGCGCTTACAAGCGCATAGCAACGTCACTCTACGGTCCAGGCCC
AGGCGTCGCTTCTCACACTGCATGTCTTGGACGGCGCTTTAGGCGACGCGAGGACAGAGC
TGCCCGCCCGCAGCAGGGTGTGTTACGCGGCTCCCTTGCTCGCCAGACCAAGTAACGAAA
GAGCAGCCCTGCAGTCGTGGAAGCGCGCTTGGAGGCTCGCGACGAGCCGCCATGGACTTT
TGGCTCGCGAGTTTGGTGCGACGAATAGTCGCGCCGATCATTTCCAGCACTCTGTTGTCA
TTTGCCATAGCCGCTTAGGGCCGCAGTGTGAGCGGAACAGTAGGCAAGGCGCACTGTGCC
CGCAGCCGGCCCAGGGACTCGCTACGCACGAAAAGCAGTCCGCAGTGTTATCGCCGTTAG
TTCTTGCCGCGCTTAACCATCATGCTGTTGCAGTAGGCCTGCGAAGGAGTGGTGCAGAGG
TCTGGAGATGCCCCACGGGGTGACTGCTCTCGCGTCGGATTTGCAAGTCGGAG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000893A_C01 KCC000893A_c01
         (893 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00091451.1| COG3490: Uncharacterized protein conserved in...    38  0.26
ref|NP_294326.1| cytidine/deoxycytidylate deaminase/nudix/methyl...    33  4.9
emb|CAE02398.1| OSJNBa0024J22.2 [Oryza sativa (japonica cultivar...    33  4.9
ref|XP_352981.1| hypothetical protein XP_352980 [Homo sapiens]         33  6.4

>ref|ZP_00091451.1| COG3490: Uncharacterized protein conserved in bacteria [Azotobacter
           vinelandii]
          Length = 540

 Score = 37.7 bits (86), Expect = 0.26
 Identities = 50/166 (30%), Positives = 66/166 (39%), Gaps = 8/166 (4%)
 Frame = -3

Query: 645 GNDRRDYS--SHQTREPKV---HGGSSRASKRASTTAGLLFRYLVWRAREPRNTPCCGRA 481
           G+ RRD +   H+ R P+    H        RA+T AG +    V  A EPR  P  GRA
Sbjct: 24  GSHRRDPARRGHRPRCPEEEARHTARPAEQGRAATVAGRVLAQPV-HAFEPRRQPGDGRA 82

Query: 480 ALSSRRLKRRPRHAV*EATPGPG---P*SDVAMRL*APRLGLPSDDAHRTTERECFPDPS 310
            ++ R+  R P+     A  GPG   P      R        P+    RT  R+    P 
Sbjct: 83  PVARRQAGRHPQ----PARRGPGGTRPAPRPGFRRQPRAARRPAASVRRTARRQGRTRPV 138

Query: 309 EWPLHQSSLQHIVCPVLVTHPAAGGQLCPRVA*SAVQDMQCEKRRL 172
           E PL Q      + P   +  A  GQ     A      +QC +RRL
Sbjct: 139 ERPLRQ------LRPPAPSARARAGQGARHPA-----RLQCPRRRL 173

>ref|NP_294326.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains
           protein [Deinococcus radiodurans] gi|7471772|pir||C75499
           cytidine/deoxycytidylate
           deaminase/nudix/methyltransferase domains protein -
           Deinococcus radiodurans (strain R1)
           gi|6458301|gb|AAF10182.1|AE001918_7
           cytidine/deoxycytidylate
           deaminase/nudix/methyltransferase domains protein
           [Deinococcus radiodurans]
          Length = 548

 Score = 33.5 bits (75), Expect = 4.9
 Identities = 23/57 (40%), Positives = 28/57 (48%), Gaps = 1/57 (1%)
 Frame = +2

Query: 101 GVIGGQAKSRRLQAHSNVT-LRSRPRRRFSHCMSWTAL*ATRGQSCPPAAGCVTNTG 268
           GVIGG        AH+ +  L S P  R   C+SWT L  T  + CP  AG V  +G
Sbjct: 55  GVIGGHDL-----AHAEINALLSVPDLRRPECLSWTVL--TTVEPCPQCAGAVAMSG 104

>emb|CAE02398.1| OSJNBa0024J22.2 [Oryza sativa (japonica cultivar-group)]
           gi|32492363|emb|CAE05121.1| OSJNBa0023J03.13 [Oryza
           sativa (japonica cultivar-group)]
          Length = 511

 Score = 33.5 bits (75), Expect = 4.9
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = -3

Query: 636 RRDYSSHQTREPKVHGGSSRASKRASTTAGLLFRYLVWRAREPRNTPCCGRAALSSRRLK 457
           RR  + H T  P+    SS ++   S      F+  +W+ R P   P  GR    SRR +
Sbjct: 245 RRCRTRHSTASPRSTARSSTSASVPSARTARTFQESLWKWRPPPPPPSTGRPRSPSRRRR 304

Query: 456 RRPRHA 439
              R++
Sbjct: 305 TTTRYS 310

>ref|XP_352981.1| hypothetical protein XP_352980 [Homo sapiens]
          Length = 235

 Score = 33.1 bits (74), Expect = 6.4
 Identities = 28/81 (34%), Positives = 31/81 (37%), Gaps = 2/81 (2%)
 Frame = -3

Query: 648 AGNDRRDYSSHQTREPKVHGGSSRASKRASTTAGLLFRYLVWRA--REPRNTPCCGRAAL 475
           A   RR +   +  EP    G   A   AS T GL +  L W    R PR  PC    A 
Sbjct: 109 AARSRRRWPPIRAAEPPARAGGVAAGS-ASATGGLGWAGLGWAGWGRPPRTHPCAAGPAW 167

Query: 474 SSRRLKRRPRHAV*EATPGPG 412
           S RR           ATPG G
Sbjct: 168 SPRR---------GSATPGSG 179

  Database: nr
    Posted date:  Oct 14, 2003 12:26 AM
  Number of letters in database: 498,525,298
  Number of sequences in database:  1,537,769
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 949,794,271
Number of Sequences: 1537769
Number of extensions: 22678649
Number of successful extensions: 70684
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 53259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70594
length of database: 498,525,298
effective HSP length: 123
effective length of database: 309,379,711
effective search space used: 53832069714
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 CM019a02_r AV387311 1 493 2 MXL013f07_r BP093778 5 281 3 CM001f02_r AV386501 374 874 4 HC013b01_r AV632827 400 893 5 MX066h05_r BP088703 423 784

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