KCC000892A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000892A_C01 KCC000892A_c01
gcaccaggcaccagctgcaccagcagccgcaccagatgcagggcggcatggtggcttacc
accaaacgcaccagcaaccaTTGTCAGCGGCGCAGCCGCAGCACTATCAGCAGCAGCCTG
GCGCGTGGCCCCAAGCGGCTGCGGGCGGCAGCAACCCATCATTGACAGACCAGAACTACC
ACGAGACGCTTGCGGCACTGCAGCGGCAGCAGGAGCGGCAAAACCAACAAGCGTTGCTGG
GGATACCGCCGGCTCAGCAGCAACAAGCACAGCAGCACCCGCAGTTCCCGCAGCATGGGG
GTTATCCTACCGGGATTGCGCCGCCGCAGCAGCCGCCGCAGCAGCAACAGCAGTATGGGT
ATCCTGACCCGCAGGCGGCTGCGCAGCAGGCGGCTGCGCAGTTCGCTGCGTACGGGCAGT
ACGGTGGGCCGGCTGGGGCGCCAGGGCTGTTCGGCCAGCAGCCGCAGCGGTGATGCCCCA
GGTGATGCATTGCATATGGAATAGGGGTGTCGTTGACGCTCTGACTCTATGAATACGATT
TGCAAGAGTGGCGTCGCACAGAGGTTGCGCTGGCGCACGCAGACGCAGATGGCCACAGTC
CATACACTTTCTTGACCCGTGTGTCAGCGTGGTTCAGTGGGCACATAGGTGGCGAGATAG
TGGGAAATCGCAGCAACGTAGGTGAGGCGTTGTTGTGGCCTGCAGCCAGGCTTGGGGAGG
TTAGGATGGCACGCTATCAGACACGCTGACGCTATCGGgatactagcggtctagcgcccc
tcgtgttgtgctctcatgcgtgtgttttgtgggcctgaggactgtaattccatcggag


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000892A_C01 KCC000892A_c01
         (838 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_346988.1| protein tyrosine phosphatase, receptor type, F ...    66  8e-10
ref|NP_649715.1| rotund CG32466-PA [Drosophila melanogaster] gi|...    61  1e-08
gb|AAL59599.1|AF395905_1 rotund [Drosophila melanogaster]              61  1e-08
gb|AAL59598.1|AF395904_1 roughened eye [Drosophila melanogaster]       61  1e-08
gb|AAO53177.1| similar to Dictyostelium discoideum (Slime mold)....    62  2e-08

>ref|XP_346988.1| protein tyrosine phosphatase, receptor type, F [Rattus norvegicus]
          Length = 197

 Score = 65.9 bits (159), Expect = 8e-10
 Identities = 61/159 (38%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
 Frame = -2

Query: 471 TAAAAGRTALAPQPAHRTARTQRTAQPPAAQPPAGQDTHTAVAAAAAAAAAQSR*DNPHA 292
           TAAAA   A A   A   A T   A   AA   A        AAAAAAA A +      A
Sbjct: 20  TAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAA 79

Query: 291 AGTAGAAVLVAAEP--AVSPATLVGFAAPAAAAV--PQASRGSSGLSMMGCCRPQPLGAT 124
           A  AGAA   AA    A +     G AA AAAA    +AS  ++G +          GAT
Sbjct: 80  AAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGAT 139

Query: 123 RQAAADSAAAAPLTMVAGAFGGKPPCRPASGAAAGAAGA 7
             AAA + AA+     AGA   + P   A+GAAA AA A
Sbjct: 140 ATAAAAAGAASAAAAAAGA--AEAPAA-AAGAAAAAAAA 175

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 55/159 (34%), Positives = 63/159 (39%)
 Frame = -2

Query: 483 TWGITAAAAGRTALAPQPAHRTARTQRTAQPPAAQPPAGQDTHTAVAAAAAAAAAQSR*D 304
           T    AAAA   A A   A   A     A   AA   A   T  A AAA AAA A +   
Sbjct: 20  TAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAA 79

Query: 303 NPHAAGTAGAAVLVAAEPAVSPATLVGFAAPAAAAVPQASRGSSGLSMMGCCRPQPLGAT 124
              A   A AA    A      A     AA AAA   +AS  ++G +          GAT
Sbjct: 80  AAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGAT 139

Query: 123 RQAAADSAAAAPLTMVAGAFGGKPPCRPASGAAAGAAGA 7
             AAA + AA+     AGA   + P   A  AAA AA A
Sbjct: 140 ATAAAAAGAASAAAAAAGA--AEAPAAAAGAAAAAAAAA 176

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 55/154 (35%), Positives = 62/154 (39%)
 Frame = +2

Query: 8   APAAPAAAPDAGRHGGLPPNAPATIVSGAAAALSAAAWRVAPSGCGRQQPIIDRPELPRD 187
           A A  AAA  A         A A   +GAAA   AAA   A                   
Sbjct: 42  AAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEA 101

Query: 188 ACGTAAAAGAAKPTSVAGDTAGSAATSTAAPAVPAAWGLSYRDCAAAAAAAAATAVWVS* 367
           A G AAAA AA   + A + A  AA + AA A  AA G +    AAA AA+AA A   + 
Sbjct: 102 AAGAAAAAAAAAGAAEASEAAAGAAAAAAAAA--AAAGATATAAAAAGAASAAAAAAGAA 159

Query: 368 PAGGCAAGGCAVRCVRAVRWAGWGARAVRPAAAA 469
            A   AAG  A     A   A   A A  PA AA
Sbjct: 160 EAPAAAAGAAAAAAAAAAAAAAAAATAAVPAGAA 193

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 59/156 (37%), Positives = 66/156 (41%), Gaps = 4/156 (2%)
 Frame = +2

Query: 14  AAPAAAPDAGRHGGLPPNAPATIVSGAAAALSAAAWRVAPSGCGRQQPIIDRPELPRDAC 193
           AA AAAP AG        A A   + AAAA  AAA   A +G                A 
Sbjct: 11  AAGAAAP-AGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAA----------AA 59

Query: 194 GTAAAAGAAKPTSVAGDTAGSAATSTAAPAVPAAWGLSYRDCAAAAAAAAATAVWVS--- 364
            TAAAA AA   + AG  A +AA   AA A  AA   +  + AA AAAAAA A   +   
Sbjct: 60  TTAAAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEAS 119

Query: 365 -*PAGGCAAGGCAVRCVRAVRWAGWGARAVRPAAAA 469
              AG  AA   A     A   A   A A   AAAA
Sbjct: 120 EAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAA 155

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 56/154 (36%), Positives = 64/154 (41%)
 Frame = +2

Query: 8   APAAPAAAPDAGRHGGLPPNAPATIVSGAAAALSAAAWRVAPSGCGRQQPIIDRPELPRD 187
           A AA AAA  A         A A   +   AA +AAA   A +G                
Sbjct: 32  AAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAAATAAA 91

Query: 188 ACGTAAAAGAAKPTSVAGDTAGSAATSTAAPAVPAAWGLSYRDCAAAAAAAAATAVWVS* 367
           A G AA A AA     AG  A +AA + AA A  AA G +    AAAAAAAAA A   + 
Sbjct: 92  AAGAAATAEAA-----AGAAAAAAAAAGAAEASEAAAGAA---AAAAAAAAAAGATATAA 143

Query: 368 PAGGCAAGGCAVRCVRAVRWAGWGARAVRPAAAA 469
            A G A+   A         A  GA A   AAAA
Sbjct: 144 AAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAA 177

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 45/127 (35%), Positives = 55/127 (42%)
 Frame = +2

Query: 8   APAAPAAAPDAGRHGGLPPNAPATIVSGAAAALSAAAWRVAPSGCGRQQPIIDRPELPRD 187
           A AA  AA  A    G    A A   + AAAA +A A   + +  G              
Sbjct: 79  AAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAA---------- 128

Query: 188 ACGTAAAAGAAKPTSVAGDTAGSAATSTAAPAVPAAWGLSYRDCAAAAAAAAATAVWVS* 367
           A   AAAAGA    + A   A +AA +  A   PAA   +    AAAAAAAAA A   + 
Sbjct: 129 AAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAV 188

Query: 368 PAGGCAA 388
           PAG  +A
Sbjct: 189 PAGAASA 195

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 56/162 (34%), Positives = 63/162 (38%), Gaps = 3/162 (1%)
 Frame = +2

Query: 8   APAAPAAAPDAGRHGGLPPNAPATIVSGAAAALSAAAWRVAPSGCGRQQPIIDRPELPRD 187
           A AA AAA  A   G     A A   + AAAA + AA   A                   
Sbjct: 27  AAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAAAAGAAATAGAAAAAAAAGAA 86

Query: 188 ACGTAAAAGAAKPTSVAGDTAGSAATSTAAPAVPAAWGLSYRDCAAAAAA---AAATAVW 358
           A   AAA  AA   + AG  A +AA + AA A  AA G +    AAAAAA   A A A  
Sbjct: 87  ATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAA 146

Query: 359 VS*PAGGCAAGGCAVRCVRAVRWAGWGARAVRPAAAAVMPQV 484
            +  A   AAG        A   A   A A   AAAA    V
Sbjct: 147 GAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAV 188

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 48/126 (38%), Positives = 55/126 (43%)
 Frame = -2

Query: 384 AQPPAGQDTHTAVAAAAAAAAAQSR*DNPHAAGTAGAAVLVAAEPAVSPATLVGFAAPAA 205
           A  PAG     A AAAAAAAAA +      AA T  AA   AA  A + A     AA AA
Sbjct: 14  AAAPAGTAA-AAAAAAAAAAAAAA------AAATGAAATTAAAAGAAAAAAAATTAAAAA 66

Query: 204 AAVPQASRGSSGLSMMGCCRPQPLGATRQAAADSAAAAPLTMVAGAFGGKPPCRPASGAA 25
           AA   A+ G++  +           A   AA   AAA      A A G       A+GAA
Sbjct: 67  AAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAA 126

Query: 24  AGAAGA 7
           A AA A
Sbjct: 127 AAAAAA 132

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 48/134 (35%), Positives = 55/134 (40%)
 Frame = -2

Query: 468 AAAAGRTALAPQPAHRTARTQRTAQPPAAQPPAGQDTHTAVAAAAAAAAAQSR*DNPHAA 289
           AAAA   A A   A   A     A   AA   A      A  AAAAAAAA    +   AA
Sbjct: 63  AAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAA 122

Query: 288 GTAGAAVLVAAEPAVSPATLVGFAAPAAAAVPQASRGSSGLSMMGCCRPQPLGATRQAAA 109
             A AA   AA  A + AT    A  A+AA   A    +  +  G        A   AAA
Sbjct: 123 AGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAA----AAAAAAAAA 178

Query: 108 DSAAAAPLTMVAGA 67
            +AAAA   + AGA
Sbjct: 179 AAAAAATAAVPAGA 192

 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 51/134 (38%), Positives = 59/134 (43%), Gaps = 5/134 (3%)
 Frame = +2

Query: 14  AAPAAAPDAGRHGGLPPNAPATIVSGAAAALSAAAWRVAPSGCGRQQPII-DRPELPRDA 190
           AA AAA  A   G     A A   + AAAA  AAA   A +G            E    A
Sbjct: 63  AAAAAAGAAATAGAAAAAAAAGAAATAAAAAGAAATAEAAAGAAAAAAAAAGAAEASEAA 122

Query: 191 CGTAAAAGAAKPTSVAGDTAGSAATSTAAPAVPAAWGLSYRDCAAA----AAAAAATAVW 358
            G AAAA AA   + AG TA +AA + AA A  AA G +    AAA    AAAAAA A  
Sbjct: 123 AGAAAAAAAA--AAAAGATATAAAAAGAASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAA 180

Query: 359 VS*PAGGCAAGGCA 400
            +       AG  +
Sbjct: 181 AAAATAAVPAGAAS 194

 Score = 49.7 bits (117), Expect = 6e-05
 Identities = 39/88 (44%), Positives = 42/88 (47%)
 Frame = +2

Query: 203 AAAGAAKPTSVAGDTAGSAATSTAAPAVPAAWGLSYRDCAAAAAAAAATAVWVS*PAGGC 382
           AAAGAA P   A   A +AA + AA A  AA G +    AAA AAAAA A      A   
Sbjct: 10  AAAGAAAPAGTAA-AAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATT---AAAA 65

Query: 383 AAGGCAVRCVRAVRWAGWGARAVRPAAA 466
           AA G A     A   A  GA A   AAA
Sbjct: 66  AAAGAAATAGAAAAAAAAGAAATAAAAA 93

 Score = 40.8 bits (94), Expect = 0.028
 Identities = 33/89 (37%), Positives = 36/89 (40%)
 Frame = -2

Query: 465 AAAGRTALAPQPAHRTARTQRTAQPPAAQPPAGQDTHTAVAAAAAAAAAQSR*DNPHAAG 286
           AAA   A A       A     A   AA   AG     A AA AA+AAA +       A 
Sbjct: 105 AAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAASAAAAAAGAAEAPAA 164

Query: 285 TAGAAVLVAAEPAVSPATLVGFAAPAAAA 199
            AGAA   AA  A + A     A PA AA
Sbjct: 165 AAGAAAAAAAAAAAAAAAAATAAVPAGAA 193

 Score = 40.8 bits (94), Expect = 0.028
 Identities = 34/75 (45%), Positives = 36/75 (47%), Gaps = 1/75 (1%)
 Frame = +2

Query: 248 AGSAATSTAAPAVPAAWGLSYRDCAAAAAAAAAT-AVWVS*PAGGCAAGGCAVRCVRAVR 424
           A  AA   AAPA  AA   +    AAAAAAAAAT A   +  A G AA   A     A  
Sbjct: 7   AVQAAAGAAAPAGTAAAAAAAAAAAAAAAAAAATGAAATTAAAAGAAAAAAAATTAAAAA 66

Query: 425 WAGWGARAVRPAAAA 469
            AG  A A   AAAA
Sbjct: 67  AAGAAATAGAAAAAA 81

 Score = 37.4 bits (85), Expect = 0.31
 Identities = 38/106 (35%), Positives = 43/106 (39%), Gaps = 7/106 (6%)
 Frame = -2

Query: 468 AAAAGRTALAPQPAHRTARTQRTA-QPPAAQPPAGQDTHTAVAAAA------AAAAAQSR 310
           AAAAG  A A   A   A     A    A++  AG     A AAAA      AAAAA + 
Sbjct: 90  AAAAGAAATAEAAAGAAAAAAAAAGAAEASEAAAGAAAAAAAAAAAAGATATAAAAAGAA 149

Query: 309 *DNPHAAGTAGAAVLVAAEPAVSPATLVGFAAPAAAAVPQASRGSS 172
                AAG A A    A   A + A     AA AA A   A   S+
Sbjct: 150 SAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAVPAGAASA 195

 Score = 35.4 bits (80), Expect = 1.2
 Identities = 29/67 (43%), Positives = 33/67 (48%)
 Frame = -2

Query: 468 AAAAGRTALAPQPAHRTARTQRTAQPPAAQPPAGQDTHTAVAAAAAAAAAQSR*DNPHAA 289
           AAAAG TA A   A   A +   A   AA+ PA      A AAAAAAAAA +       A
Sbjct: 133 AAAAGATATAAAAAG--AASAAAAAAGAAEAPAAAAGAAAAAAAAAAAAAAAAATAAVPA 190

Query: 288 GTAGAAV 268
           G A A +
Sbjct: 191 GAASATM 197

>ref|NP_649715.1| rotund CG32466-PA [Drosophila melanogaster]
            gi|23170600|gb|AAF54032.2| CG32466-PA [Drosophila
            melanogaster]
          Length = 944

 Score = 60.8 bits (146), Expect(2) = 1e-08
 Identities = 37/107 (34%), Positives = 49/107 (45%)
 Frame = +3

Query: 120  GAWPQAAAGGSNPSLTDQNYHETLAALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHG 299
            G WP+ +   +  +   +  H+     Q+QQ++Q QQ        QQQQ Q H   PQHG
Sbjct: 717  GYWPKVSPDSAAAANAMEVMHQQQQQQQQQQQQQQQQQ-------QQQQQQAHHHHPQHG 769

Query: 300  GYPTGIAPPQQPPQQQQQYGYPDPQAAAQQAAAQFAAYGQYGGPAGA 440
              P    PPQQ  QQQQQ  +  PQ       +  A Y Q   P G+
Sbjct: 770  VPPQQHVPPQQQQQQQQQQQHHHPQQQPPPQHSMEAHYAQPTAPNGS 816

 Score = 26.9 bits (58), Expect(2) = 7.9
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +3

Query: 9   HQLHQQPHQMQGGMVAYHQTHQQPLSAAQPQH 104
           H  H  PH    G   YHQ    P     P H
Sbjct: 13  HHPHSNPHNSSHGHSDYHQFRSYPSFVVTPYH 44

 Score = 24.3 bits (51), Expect(2) = 7.9
 Identities = 20/51 (39%), Positives = 21/51 (40%), Gaps = 5/51 (9%)
 Frame = +2

Query: 218 AKPTSVAGDTAGSAATS-----TAAPAVPAAWGLSYRDCAAAAAAAAATAV 355
           A PT   G    S   S     T     P     S+   AAAAAAAAA AV
Sbjct: 59  APPTPCNGPVPVSVPVSIPVCHTGGQGSPVIVESSFAIAAAAAAAAAAVAV 109

 Score = 20.8 bits (42), Expect(2) = 1e-08
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 59  PPNAPATIVSGAAAALSAAAWRVAPS 136
           PP  P +  + AAAA +AA     P+
Sbjct: 662 PPIVPGSAAAIAAAAAAAAGGSANPA 687

>gb|AAL59599.1|AF395905_1 rotund [Drosophila melanogaster]
          Length = 943

 Score = 60.8 bits (146), Expect(2) = 1e-08
 Identities = 37/107 (34%), Positives = 49/107 (45%)
 Frame = +3

Query: 120  GAWPQAAAGGSNPSLTDQNYHETLAALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHG 299
            G WP+ +   +  +   +  H+     Q+QQ++Q QQ        QQQQ Q H   PQHG
Sbjct: 716  GYWPKVSPDSAAAANAMEVMHQQQQQQQQQQQQQQQQQ-------QQQQQQAHHHHPQHG 768

Query: 300  GYPTGIAPPQQPPQQQQQYGYPDPQAAAQQAAAQFAAYGQYGGPAGA 440
              P    PPQQ  QQQQQ  +  PQ       +  A Y Q   P G+
Sbjct: 769  VPPQQHVPPQQQQQQQQQQQHHHPQQQPPPQHSMEAHYAQPTAPNGS 815

 Score = 26.9 bits (58), Expect(2) = 7.9
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +3

Query: 9   HQLHQQPHQMQGGMVAYHQTHQQPLSAAQPQH 104
           H  H  PH    G   YHQ    P     P H
Sbjct: 13  HHPHSNPHNSSHGHSDYHQFRSYPSFVVTPYH 44

 Score = 24.3 bits (51), Expect(2) = 7.9
 Identities = 20/51 (39%), Positives = 21/51 (40%), Gaps = 5/51 (9%)
 Frame = +2

Query: 218 AKPTSVAGDTAGSAATS-----TAAPAVPAAWGLSYRDCAAAAAAAAATAV 355
           A PT   G    S   S     T     P     S+   AAAAAAAAA AV
Sbjct: 59  APPTPCNGPVPVSVPVSIPVCHTGGQGSPVIVESSFAIAAAAAAAAAAVAV 109

 Score = 20.8 bits (42), Expect(2) = 1e-08
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 59  PPNAPATIVSGAAAALSAAAWRVAPS 136
           PP  P +  + AAAA +AA     P+
Sbjct: 661 PPIVPGSAAAIAAAAAAAAGGSANPA 686

>gb|AAL59598.1|AF395904_1 roughened eye [Drosophila melanogaster]
          Length = 692

 Score = 60.8 bits (146), Expect(2) = 1e-08
 Identities = 37/107 (34%), Positives = 49/107 (45%)
 Frame = +3

Query: 120 GAWPQAAAGGSNPSLTDQNYHETLAALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHG 299
           G WP+ +   +  +   +  H+     Q+QQ++Q QQ        QQQQ Q H   PQHG
Sbjct: 465 GYWPKVSPDSAAAANAMEVMHQQQQQQQQQQQQQQQQQ-------QQQQQQAHHHHPQHG 517

Query: 300 GYPTGIAPPQQPPQQQQQYGYPDPQAAAQQAAAQFAAYGQYGGPAGA 440
             P    PPQQ  QQQQQ  +  PQ       +  A Y Q   P G+
Sbjct: 518 VPPQQHVPPQQQQQQQQQQQHHHPQQQPPPQHSMEAHYAQPTAPNGS 564

 Score = 20.8 bits (42), Expect(2) = 1e-08
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 59  PPNAPATIVSGAAAALSAAAWRVAPS 136
           PP  P +  + AAAA +AA     P+
Sbjct: 410 PPIVPGSAAAIAAAAAAAAGGSANPA 435

>gb|AAO53177.1| similar to Dictyostelium discoideum (Slime mold). Adenylyl cyclase
          Length = 2053

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 46/134 (34%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
 Frame = +3

Query: 6   RHQLHQQPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQNYHE 185
           +HQ HQQ  Q        HQ HQQ       Q +QQQ     Q      N  +  Q    
Sbjct: 271 QHQQHQQHQQQHQQHQQQHQQHQQQHQHQHQQQHQQQQQPQNQQQQQPQNQQMQQQQQQN 330

Query: 186 TLAALQRQQERQNQQALLGIPPAQQQQ--AQQHPQFPQHGGYPTGIAPPQQPPQQQQQYG 359
                Q+QQ +Q QQ +      QQQQ   QQ  Q  Q       I  PQQ PQQQQQ  
Sbjct: 331 QQMQQQQQQNQQMQQQMQQQQQLQQQQQILQQQQQIQQQQQQQQQILQPQQQPQQQQQQQ 390

Query: 360 YPDPQAAAQQAAAQ 401
               Q   QQ   Q
Sbjct: 391 QLLQQQQQQQLMQQ 404

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 50/142 (35%), Positives = 54/142 (37%), Gaps = 12/142 (8%)
 Frame = +3

Query: 12  QLHQQPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPS-------LTD 170
           Q  QQ  QMQ  M    Q  QQ     Q Q  QQQ     Q       P        L  
Sbjct: 335 QQQQQNQQMQQQMQQQQQLQQQQQILQQQQQIQQQQQQQQQILQPQQQPQQQQQQQQLLQ 394

Query: 171 QNYHETLAALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHGGYPTGIAPPQQP----- 335
           Q   + L   Q+QQ++Q QQ        QQQQ QQ  Q PQ         P QQP     
Sbjct: 395 QQQQQQLMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQIQQQQPQQQPQQQQQ 454

Query: 336 PQQQQQYGYPDPQAAAQQAAAQ 401
           PQQQQ    P PQ   QQ   Q
Sbjct: 455 PQQQQSQQQPQPQQQQQQQQQQ 476

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 53/177 (29%), Positives = 61/177 (33%), Gaps = 22/177 (12%)
 Frame = +3

Query: 6   RHQLHQQPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQNYHE 185
           +HQ HQQ HQ        HQ HQQ       Q +QQQ     Q      N  +  Q    
Sbjct: 274 QHQQHQQQHQQHQQQ---HQQHQQQHQHQHQQQHQQQQQPQNQQQQQPQNQQMQQQQQQN 330

Query: 186 TLAALQRQQERQNQQALLGIPPAQQQQA--QQHPQFPQHGGYPTGIAPPQQPPQQQQQY- 356
                Q+QQ +Q QQ +      QQQQ   QQ  Q  Q       I  PQQ PQQQQQ  
Sbjct: 331 QQMQQQQQQNQQMQQQMQQQQQLQQQQQILQQQQQIQQQQQQQQQILQPQQQPQQQQQQQ 390

Query: 357 -------------------GYPDPQAAAQQAAAQFAAYGQYGGPAGAPGLFGQQPQR 470
                                   Q   QQ   Q     Q   P     +  QQPQ+
Sbjct: 391 QLLQQQQQQQLMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQIQQQQPQQ 447

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 43/125 (34%), Positives = 47/125 (37%)
 Frame = +3

Query: 12  QLHQQPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQNYHETL 191
           Q  QQP Q Q       Q  QQ L   Q Q  QQQ     Q            Q   +  
Sbjct: 378 QPQQQPQQQQQQQQLLQQQQQQQLMQQQQQQQQQQQQQQQQ------------QQQQQQQ 425

Query: 192 AALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHGGYPTGIAPPQQPPQQQQQYGYPDP 371
              Q+QQ+ Q QQ +    P QQ Q QQ PQ  Q    P     PQQ  QQQQQ      
Sbjct: 426 QQQQQQQQPQQQQQIQQQQPQQQPQQQQQPQQQQSQQQP----QPQQQQQQQQQQQQQQQ 481

Query: 372 QAAAQ 386
           Q   Q
Sbjct: 482 QIQQQ 486

 Score = 43.9 bits (102), Expect = 0.003
 Identities = 42/137 (30%), Positives = 53/137 (38%), Gaps = 5/137 (3%)
 Frame = +3

Query: 6   RHQLHQ-QPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQNYH 182
           +HQ+ Q Q  Q     +   Q HQQ L   Q QH Q Q    P               +H
Sbjct: 187 QHQIQQLQLQQQLQQQLQQQQQHQQQLQQ-QMQHQQMQQQQIP---------------HH 230

Query: 183 ETLAALQRQQERQ----NQQALLGIPPAQQQQAQQHPQFPQHGGYPTGIAPPQQPPQQQQ 350
           +    LQ+QQ++Q     Q  L+     QQQQ QQ  Q  QH  +       QQ  QQ Q
Sbjct: 231 QQNQQLQQQQQQQVPHQQQNQLIQQQQQQQQQQQQQQQHQQHQQHQQHQQQHQQHQQQHQ 290

Query: 351 QYGYPDPQAAAQQAAAQ 401
           Q+         QQ   Q
Sbjct: 291 QHQQQHQHQHQQQHQQQ 307

 Score = 43.1 bits (100), Expect = 0.006
 Identities = 41/130 (31%), Positives = 48/130 (36%)
 Frame = +3

Query: 12  QLHQQPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQNYHETL 191
           Q   Q  QMQ   + +HQ +QQ     Q Q   QQ     Q            Q +    
Sbjct: 214 QQQMQHQQMQQQQIPHHQQNQQLQQQQQQQVPHQQQNQLIQQQQQQQQQQQQQQQHQ--- 270

Query: 192 AALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHGGYPTGIAPPQQPPQQQQQYGYPDP 371
              Q QQ +Q+QQ         QQQ QQH Q  QH          QQ PQ QQQ    + 
Sbjct: 271 ---QHQQHQQHQQQ----HQQHQQQHQQHQQQHQHQHQQQ--HQQQQQPQNQQQQQPQNQ 321

Query: 372 QAAAQQAAAQ 401
           Q   QQ   Q
Sbjct: 322 QMQQQQQQNQ 331

 Score = 39.3 bits (90), Expect = 0.081
 Identities = 44/142 (30%), Positives = 50/142 (34%), Gaps = 3/142 (2%)
 Frame = +3

Query: 6   RHQLHQQPHQMQ---GGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQN 176
           +HQL QQ  Q Q          QTHQ      Q QH  QQ     Q         L  Q 
Sbjct: 153 QHQLQQQIQQQQIQFQNQNQNQQTHQNRQLQQQQQHQIQQLQLQQQL-----QQQLQQQQ 207

Query: 177 YHETLAALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHGGYPTGIAPPQQPPQQQQQY 356
            H+     Q QQ+ Q+QQ        QQQQ   H Q  Q         P QQ  Q  QQ 
Sbjct: 208 QHQQ----QLQQQMQHQQM-------QQQQIPHHQQNQQLQQQQQQQVPHQQQNQLIQQQ 256

Query: 357 GYPDPQAAAQQAAAQFAAYGQY 422
                Q   QQ   Q   + Q+
Sbjct: 257 QQQQQQQQQQQQHQQHQQHQQH 278

 Score = 38.1 bits (87), Expect = 0.18
 Identities = 28/72 (38%), Positives = 30/72 (40%), Gaps = 6/72 (8%)
 Frame = +3

Query: 204 RQQERQNQQALLGIPPAQQQQAQQHPQFPQHGGYPTGIAPPQQPPQQQQ------QYGYP 365
           RQQ++Q QQ        QQQQ QQ  Q  Q       I P  QP QQ Q      Q   P
Sbjct: 655 RQQQQQQQQQQQQQQQQQQQQQQQQQQQIQIQNQTIPIPPSPQPTQQYQPITQLDQQPQP 714

Query: 366 DPQAAAQQAAAQ 401
            PQ   QQ   Q
Sbjct: 715 QPQPQLQQQLQQ 726

 Score = 37.4 bits (85), Expect = 0.31
 Identities = 28/90 (31%), Positives = 34/90 (37%)
 Frame = +3

Query: 6   RHQLHQQPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQNYHE 185
           + Q  QQ  Q Q       Q  QQ     QPQ  QQ     PQ            Q+  +
Sbjct: 404 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQIQQQQPQQQPQQQQQPQQQQSQQQ 463

Query: 186 TLAALQRQQERQNQQALLGIPPAQQQQAQQ 275
                Q+QQ++Q QQ        QQQQ QQ
Sbjct: 464 PQPQQQQQQQQQQQQ--------QQQQIQQ 485

 Score = 35.0 bits (79), Expect = 1.5
 Identities = 30/99 (30%), Positives = 36/99 (36%)
 Frame = +3

Query: 6   RHQLHQQPHQMQGGMVAYHQTHQQPLSAAQPQHYQQQPGAWPQAAAGGSNPSLTDQNYHE 185
           + Q  QQ  Q Q       Q  QQ     Q Q  QQQP   PQ            Q   +
Sbjct: 408 QQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQIQQQQPQQQPQ------QQQQPQQQQSQ 461

Query: 186 TLAALQRQQERQNQQALLGIPPAQQQQAQQHPQFPQHGG 302
                Q+QQ++Q QQ        QQQQ Q   Q+    G
Sbjct: 462 QQPQPQQQQQQQQQQ--------QQQQQQIQQQYVDDNG 492



EST assemble image


clone accession position
1 CM001e08_r AV386469 1 545
2 HCL051f07_r AV642434 360 838




Chlamydomonas reinhardtii
Kazusa DNA Research Institute